RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 TSPY2A6NKD2 308 aa22.78■■□□□ 1.24
CHRD-216ENST00000486066 ORC4O43929 436 aa22.78■■□□□ 1.24
CHRD-216ENST00000486066 GPR37L1O60883 481 aa22.78■■□□□ 1.24
CHRD-216ENST00000486066 SLC16A2P36021 539 aa22.78■■□□□ 1.24
CHRD-216ENST00000486066 CTDSPL2Q05D32 466 aa22.78■■□□□ 1.24
CHRD-216ENST00000486066 RBL2Q08999 1139 aa22.78■■□□□ 1.24
CHRD-216ENST00000486066 KIAA1217Q5T5P2 1943 aa22.77■■□□□ 1.24
CHRD-216ENST00000486066 LCHNA4D1U4 455 aa22.77■■□□□ 1.24
CHRD-216ENST00000486066 KPNA6O60684 536 aa22.77■■□□□ 1.24
CHRD-216ENST00000486066 LRRFIP1Q32MZ4 808 aaKnown RBP22.77■■□□□ 1.24
CHRD-216ENST00000486066 SYDE2Q5VT97 1194 aa22.77■■□□□ 1.24
CHRD-216ENST00000486066 SESTD1Q86VW0 696 aa22.77■■□□□ 1.24
CHRD-216ENST00000486066 COPS5Q92905 334 aa22.77■■□□□ 1.24
CHRD-216ENST00000486066 CD320Q9NPF0 282 aa22.77■■□□□ 1.24
CHRD-216ENST00000486066 LMCD1Q9NZU5 365 aa22.77■■□□□ 1.24
CHRD-216ENST00000486066 ARIH2O95376 493 aa22.76■■□□□ 1.23
CHRD-216ENST00000486066 WDR5P61964 334 aaKnown RBP22.76■■□□□ 1.23
CHRD-216ENST00000486066 RPS6P62753 249 aaKnown RBP22.76■■□□□ 1.23
CHRD-216ENST00000486066 PPP2R5BQ15173 497 aa22.76■■□□□ 1.23
CHRD-216ENST00000486066 TMEM31Q5JXX7 168 aa22.76■■□□□ 1.23
CHRD-216ENST00000486066 SCFD2Q8WU76 684 aa22.76■■□□□ 1.23
CHRD-216ENST00000486066 CXCL10P02778 98 aa22.75■■□□□ 1.23
CHRD-216ENST00000486066 BFSP2Q13515 415 aa22.75■■□□□ 1.23
CHRD-216ENST00000486066 FAM47CQ5HY64 1035 aa22.75■■□□□ 1.23
CHRD-216ENST00000486066 CCDC62Q6P9F0 684 aa22.75■■□□□ 1.23
CHRD-216ENST00000486066 RETREG2Q8NC44 543 aa22.75■■□□□ 1.23
CHRD-216ENST00000486066 DNERQ8NFT8 737 aa22.75■■□□□ 1.23
CHRD-216ENST00000486066 DHX38Q92620 1227 aaKnown RBP22.75■■□□□ 1.23
CHRD-216ENST00000486066 GPHNQ9NQX3 736 aaPredicted RBP22.75■■□□□ 1.23
CHRD-216ENST00000486066 WDR19Q8NEZ3 1342 aa22.75■■□□□ 1.23
CHRD-216ENST00000486066 PTPDC1A2A3K4 754 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 KIF28PB7ZC32 967 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 PI4K2BG5E9Z4 385 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 SNHG28P0DPA3 235 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 TCTN1Q2MV58 587 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 VPS53Q5VIR6 699 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 CAGE1Q8TC20 777 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 OTUD7AQ8TE49 926 aaPredicted RBP22.74■■□□□ 1.23
CHRD-216ENST00000486066 AFAP1L1Q8TED9 768 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 KAT2BQ92831 832 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 TMEM47Q9BQJ4 181 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 TCP11L1Q9NUJ3 509 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 HCN4Q9Y3Q4 1203 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 RAD50Q92878 1312 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 SALL3Q9BXA9 1300 aa22.74■■□□□ 1.23
CHRD-216ENST00000486066 C5orf42Q9H799 3197 aa22.73■■□□□ 1.23
CHRD-216ENST00000486066 PDHBP11177 359 aa22.73■■□□□ 1.23
CHRD-216ENST00000486066 ALX1Q15699 326 aa22.73■■□□□ 1.23
CHRD-216ENST00000486066 CCDC96Q2M329 555 aa22.73■■□□□ 1.23
CHRD-216ENST00000486066 BRDTQ58F21 947 aaPredicted RBP22.73■■□□□ 1.23
CHRD-216ENST00000486066 RNF207Q6ZRF8 634 aa22.73■■□□□ 1.23
CHRD-216ENST00000486066 FTOQ9C0B1 505 aaKnown RBP eCLIP22.73■■□□□ 1.23
CHRD-216ENST00000486066 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.72■■□□□ 1.23
CHRD-216ENST00000486066 TOP1P11387 765 aaKnown RBP22.72■■□□□ 1.23
CHRD-216ENST00000486066 CALML3P27482 149 aa22.72■■□□□ 1.23
CHRD-216ENST00000486066 DEFB103AP81534 67 aa22.72■■□□□ 1.23
CHRD-216ENST00000486066 PDE4DQ08499 809 aa22.72■■□□□ 1.23
CHRD-216ENST00000486066 GDF6Q6KF10 455 aaPredicted RBP22.72■■□□□ 1.23
CHRD-216ENST00000486066 TRAF7Q6Q0C0 670 aa22.72■■□□□ 1.23
CHRD-216ENST00000486066 TMCO2Q7Z6W1 182 aaPredicted RBP22.72■■□□□ 1.23
CHRD-216ENST00000486066 MIER1Q8N108 512 aa22.72■■□□□ 1.23
CHRD-216ENST00000486066 RGS22Q8NE09 1264 aa22.72■■□□□ 1.23
CHRD-216ENST00000486066 FSD1Q9BTV5 496 aa22.72■■□□□ 1.23
CHRD-216ENST00000486066 PNMA2Q9UL42 364 aa22.72■■□□□ 1.23
CHRD-216ENST00000486066 RANBP6O60518 1105 aaKnown RBP22.71■■□□□ 1.23
CHRD-216ENST00000486066 NBNO60934 754 aa22.71■■□□□ 1.23
CHRD-216ENST00000486066 TXNP10599 105 aaKnown RBP22.71■■□□□ 1.23
CHRD-216ENST00000486066 ERVK-21P61565 698 aa22.71■■□□□ 1.23
CHRD-216ENST00000486066 MKRN4PQ13434 485 aaPredicted RBP22.71■■□□□ 1.23
CHRD-216ENST00000486066 PTGISQ16647 500 aa22.71■■□□□ 1.23
CHRD-216ENST00000486066 GDPD5Q8WTR4 605 aa22.71■■□□□ 1.23
CHRD-216ENST00000486066 SUGCTQ9HAC7 445 aa22.71■■□□□ 1.23
CHRD-216ENST00000486066 RCAN3Q9UKA8 241 aa22.71■■□□□ 1.23
CHRD-216ENST00000486066 MTMR7Q9Y216 660 aa22.71■■□□□ 1.23
CHRD-216ENST00000486066 FRMPD2Q68DX3 1309 aaPredicted RBP22.71■■□□□ 1.23
CHRD-216ENST00000486066 GJB5O95377 273 aa22.7■■□□□ 1.22
CHRD-216ENST00000486066 MMP3P08254 477 aa22.7■■□□□ 1.22
CHRD-216ENST00000486066 SELPP16109 830 aa22.7■■□□□ 1.22
CHRD-216ENST00000486066 ARHGAP1Q07960 439 aa22.7■■□□□ 1.22
CHRD-216ENST00000486066 ZNF543Q08ER8 600 aa22.7■■□□□ 1.22
CHRD-216ENST00000486066 MICAL3Q7RTP6 2002 aa22.7■■□□□ 1.22
CHRD-216ENST00000486066 KCNJ6P48051 423 aa22.69■■□□□ 1.22
CHRD-216ENST00000486066 CNKSR3Q6P9H4 555 aa22.69■■□□□ 1.22
CHRD-216ENST00000486066 LRRC8DQ7L1W4 858 aa22.69■■□□□ 1.22
CHRD-216ENST00000486066 AFG1LQ8WV93 481 aa22.69■■□□□ 1.22
CHRD-216ENST00000486066 MAF1Q9H063 256 aa22.69■■□□□ 1.22
CHRD-216ENST00000486066 GPCPD1Q9NPB8 672 aa22.69■■□□□ 1.22
CHRD-216ENST00000486066 LINC01553A4QN01 128 aa22.68■■□□□ 1.22
CHRD-216ENST00000486066 FAM86C2PA6NEL3 165 aa22.68■■□□□ 1.22
CHRD-216ENST00000486066 RBAK-RBAKDNI3L0D1 243 aa22.68■■□□□ 1.22
CHRD-216ENST00000486066 PARNO95453 639 aaKnown RBP22.68■■□□□ 1.22
CHRD-216ENST00000486066 TRIM71Q2Q1W2 868 aaKnown RBP22.68■■□□□ 1.22
CHRD-216ENST00000486066 CCDC155Q8N6L0 562 aa22.68■■□□□ 1.22
CHRD-216ENST00000486066 RAD9AQ99638 391 aa22.68■■□□□ 1.22
CHRD-216ENST00000486066 UBE2ZQ9H832 354 aaPredicted RBP22.68■■□□□ 1.22
CHRD-216ENST00000486066 GTF2IRD1Q9UHL9 959 aa22.68■■□□□ 1.22
CHRD-216ENST00000486066 ZMYM6O95789 1325 aa22.67■■□□□ 1.22
CHRD-216ENST00000486066 CKBP12277 381 aa22.67■■□□□ 1.22
CHRD-216ENST00000486066 MBTPS1Q14703 1052 aa22.67■■□□□ 1.22
CHRD-216ENST00000486066 LEXMQ3ZCV2 418 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms