RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 ZMYND12Q9H0C1 365 aa27.15■■□□□ 1.94
ABCF3-216ENST00000485921 GLT8D2Q9H1C3 349 aa27.15■■□□□ 1.94
ABCF3-216ENST00000485921 C6orf50Q9HD87 102 aa27.15■■□□□ 1.94
ABCF3-216ENST00000485921 PXMP2Q9NR77 195 aa27.15■■□□□ 1.94
ABCF3-216ENST00000485921 CNPY2Q9Y2B0 182 aa27.15■■□□□ 1.94
ABCF3-216ENST00000485921 RPTORQ8N122 1335 aa27.15■■□□□ 1.94
ABCF3-216ENST00000485921 CENPFP49454 3210 aa27.14■■□□□ 1.94
ABCF3-216ENST00000485921 B4DLN1 442 aa27.14■■□□□ 1.94
ABCF3-216ENST00000485921 CCL5P13501 91 aa27.14■■□□□ 1.94
ABCF3-216ENST00000485921 TEX2Q8IWB9 1127 aa27.14■■□□□ 1.94
ABCF3-216ENST00000485921 TRPV1Q8NER1 839 aa27.14■■□□□ 1.94
ABCF3-216ENST00000485921 MORC4Q8TE76 937 aa27.14■■□□□ 1.94
ABCF3-216ENST00000485921 UNC93B1Q9H1C4 597 aa27.14■■□□□ 1.94
ABCF3-216ENST00000485921 HMX1Q9NP08 348 aaPredicted RBP27.14■■□□□ 1.94
ABCF3-216ENST00000485921 CYBAP13498 195 aa27.13■■□□□ 1.93
ABCF3-216ENST00000485921 EIF2AK2P19525 551 aaKnown RBP27.13■■□□□ 1.93
ABCF3-216ENST00000485921 GNA11P29992 359 aa27.13■■□□□ 1.93
ABCF3-216ENST00000485921 CCND3P30281 292 aaPredicted RBP27.13■■□□□ 1.93
ABCF3-216ENST00000485921 NLRP5P59047 1200 aa27.13■■□□□ 1.93
ABCF3-216ENST00000485921 IWS1Q96ST2 819 aa27.13■■□□□ 1.93
ABCF3-216ENST00000485921 ALG1Q9BT22 464 aa27.13■■□□□ 1.93
ABCF3-216ENST00000485921 NRBP1Q9UHY1 535 aa27.13■■□□□ 1.93
ABCF3-216ENST00000485921 EDNRBP24530 442 aa27.12■■□□□ 1.93
ABCF3-216ENST00000485921 PDE4DQ08499 809 aa27.12■■□□□ 1.93
ABCF3-216ENST00000485921 RNF208Q9H0X6 261 aa27.12■■□□□ 1.93
ABCF3-216ENST00000485921 ABHD16BQ9H3Z7 469 aa27.12■■□□□ 1.93
ABCF3-216ENST00000485921 XBP1P17861 261 aa27.11■■□□□ 1.93
ABCF3-216ENST00000485921 CNGA1P29973 690 aa27.11■■□□□ 1.93
ABCF3-216ENST00000485921 HMGN5P82970 282 aaKnown RBP27.11■■□□□ 1.93
ABCF3-216ENST00000485921 ACVR2BQ13705 512 aa27.11■■□□□ 1.93
ABCF3-216ENST00000485921 FAM177A1Q8N128 213 aaPredicted RBP27.11■■□□□ 1.93
ABCF3-216ENST00000485921 SNX21Q969T3 373 aa27.11■■□□□ 1.93
ABCF3-216ENST00000485921 PDCD2LQ9BRP1 358 aa27.11■■□□□ 1.93
ABCF3-216ENST00000485921 ZHX1Q9UKY1 873 aaPredicted RBP27.11■■□□□ 1.93
ABCF3-216ENST00000485921 SPDYE3A6NKU9 549 aa27.1■■□□□ 1.93
ABCF3-216ENST00000485921 NR3C2P08235 984 aa27.1■■□□□ 1.93
ABCF3-216ENST00000485921 ZNF865P0CJ78 1059 aaPredicted RBP27.1■■□□□ 1.93
ABCF3-216ENST00000485921 EEPD1Q7L9B9 569 aa27.1■■□□□ 1.93
ABCF3-216ENST00000485921 BICD2Q8TD16 824 aa27.1■■□□□ 1.93
ABCF3-216ENST00000485921 KATNBL1Q9H079 304 aa27.1■■□□□ 1.93
ABCF3-216ENST00000485921 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.1■■□□□ 1.93
ABCF3-216ENST00000485921 PCDHA6Q9UN73 950 aa27.1■■□□□ 1.93
ABCF3-216ENST00000485921 PCDHA8Q9Y5H6 950 aa27.1■■□□□ 1.93
ABCF3-216ENST00000485921 MCM3APO60318 1980 aa27.09■■□□□ 1.93
ABCF3-216ENST00000485921 ADAMTS3O15072 1205 aa27.09■■□□□ 1.93
ABCF3-216ENST00000485921 FOSP01100 380 aaPredicted RBP27.09■■□□□ 1.93
ABCF3-216ENST00000485921 CLK2P49760 499 aaKnown RBP27.09■■□□□ 1.93
ABCF3-216ENST00000485921 PGM5Q15124 567 aa27.09■■□□□ 1.93
ABCF3-216ENST00000485921 GJB4Q9NTQ9 266 aa27.09■■□□□ 1.93
ABCF3-216ENST00000485921 TMEM260Q9NX78 707 aa27.09■■□□□ 1.93
ABCF3-216ENST00000485921 PCDHA4Q9UN74 947 aa27.09■■□□□ 1.93
ABCF3-216ENST00000485921 KCNJ14Q9UNX9 436 aa27.09■■□□□ 1.93
ABCF3-216ENST00000485921 K7ELQ4 463 aaPredicted RBP27.08■■□□□ 1.93
ABCF3-216ENST00000485921 MYCLP12524 364 aaPredicted RBP27.08■■□□□ 1.93
ABCF3-216ENST00000485921 STXBP2Q15833 593 aa27.08■■□□□ 1.93
ABCF3-216ENST00000485921 JAKMIP3Q5VZ66 844 aa27.08■■□□□ 1.93
ABCF3-216ENST00000485921 GALNT17Q6IS24 598 aa27.08■■□□□ 1.93
ABCF3-216ENST00000485921 FBXO16Q8IX29 292 aaPredicted RBP27.08■■□□□ 1.93
ABCF3-216ENST00000485921 REXO1Q8N1G1 1221 aaKnown RBP27.08■■□□□ 1.93
ABCF3-216ENST00000485921 PHF20Q9BVI0 1012 aa27.08■■□□□ 1.93
ABCF3-216ENST00000485921 TMEM106CQ9BVX2 250 aa27.08■■□□□ 1.93
ABCF3-216ENST00000485921 VTA1Q9NP79 307 aa27.08■■□□□ 1.93
ABCF3-216ENST00000485921 PAK6Q9NQU5 681 aaPredicted RBP27.08■■□□□ 1.93
ABCF3-216ENST00000485921 FRMPD4Q14CM0 1322 aa27.08■■□□□ 1.93
ABCF3-216ENST00000485921 FOSBP53539 338 aa27.07■■□□□ 1.92
ABCF3-216ENST00000485921 AP3B2Q13367 1082 aa27.07■■□□□ 1.92
ABCF3-216ENST00000485921 FAM184AQ8NB25 1140 aa27.07■■□□□ 1.92
ABCF3-216ENST00000485921 IL31RAQ8NI17 732 aa27.07■■□□□ 1.92
ABCF3-216ENST00000485921 PGBD1Q96JS3 809 aa27.07■■□□□ 1.92
ABCF3-216ENST00000485921 EHMT1Q9H9B1 1298 aa27.07■■□□□ 1.92
ABCF3-216ENST00000485921 CCDC85CA6NKD9 419 aa27.06■■□□□ 1.92
ABCF3-216ENST00000485921 SEPT4O43236 478 aa27.06■■□□□ 1.92
ABCF3-216ENST00000485921 CCND2P30279 289 aa27.06■■□□□ 1.92
ABCF3-216ENST00000485921 CUL4AQ13619 759 aa27.06■■□□□ 1.92
ABCF3-216ENST00000485921 MCTP2Q6DN12 878 aa27.06■■□□□ 1.92
ABCF3-216ENST00000485921 VSIG10LQ86VR7 867 aa27.06■■□□□ 1.92
ABCF3-216ENST00000485921 DAGLBQ8NCG7 672 aa27.06■■□□□ 1.92
ABCF3-216ENST00000485921 RASGRP4Q8TDF6 673 aa27.06■■□□□ 1.92
ABCF3-216ENST00000485921 DEFB118Q96PH6 123 aa27.06■■□□□ 1.92
ABCF3-216ENST00000485921 ANO3Q9BYT9 981 aa27.06■■□□□ 1.92
ABCF3-216ENST00000485921 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.06■■□□□ 1.92
ABCF3-216ENST00000485921 EIF3JO75822 258 aaKnown RBP27.05■■□□□ 1.92
ABCF3-216ENST00000485921 GJB1P08034 283 aa27.05■■□□□ 1.92
ABCF3-216ENST00000485921 TRIM29Q14134 588 aa27.05■■□□□ 1.92
ABCF3-216ENST00000485921 NPY5RQ15761 445 aa27.05■■□□□ 1.92
ABCF3-216ENST00000485921 CCDC144BQ3MJ40 725 aa27.05■■□□□ 1.92
ABCF3-216ENST00000485921 TAPT1Q6NXT6 567 aa27.05■■□□□ 1.92
ABCF3-216ENST00000485921 HSCBQ8IWL3 235 aa27.05■■□□□ 1.92
ABCF3-216ENST00000485921 BLIDQ8IZY5 108 aa27.05■■□□□ 1.92
ABCF3-216ENST00000485921 PDGFCQ9NRA1 345 aa27.05■■□□□ 1.92
ABCF3-216ENST00000485921 DDX20Q9UHI6 824 aaKnown RBP27.05■■□□□ 1.92
ABCF3-216ENST00000485921 FAM184BQ9ULE4 1060 aa27.05■■□□□ 1.92
ABCF3-216ENST00000485921 AKR1A1P14550 325 aa27.04■■□□□ 1.92
ABCF3-216ENST00000485921 PCNX4Q63HM2 1172 aa27.04■■□□□ 1.92
ABCF3-216ENST00000485921 SMC3Q9UQE7 1217 aa27.04■■□□□ 1.92
ABCF3-216ENST00000485921 MSCO60682 206 aa27.03■■□□□ 1.92
ABCF3-216ENST00000485921 KRT40Q6A162 431 aa27.03■■□□□ 1.92
ABCF3-216ENST00000485921 ZFP91Q96JP5 570 aaPredicted RBP27.03■■□□□ 1.92
ABCF3-216ENST00000485921 C8orf76Q96K31 380 aa27.03■■□□□ 1.92
ABCF3-216ENST00000485921 GJB2P29033 226 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms