RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 FOXK2Q01167 660 aa21.43■■□□□ 1.02
DDR1-245ENST00000484556 PTPROQ16827 1216 aa21.43■■□□□ 1.02
DDR1-245ENST00000484556 HERC4Q5GLZ8 1057 aaPredicted RBP21.43■■□□□ 1.02
DDR1-245ENST00000484556 RNF135Q8IUD6 432 aa21.43■■□□□ 1.02
DDR1-245ENST00000484556 RPAP2Q8IXW5 612 aaPredicted RBP21.43■■□□□ 1.02
DDR1-245ENST00000484556 MKL1Q969V6 931 aa21.43■■□□□ 1.02
DDR1-245ENST00000484556 CTNNA3Q9UI47 895 aa21.43■■□□□ 1.02
DDR1-245ENST00000484556 NLRC5Q86WI3 1866 aa21.43■■□□□ 1.02
DDR1-245ENST00000484556 CXCL10P02778 98 aa21.42■■□□□ 1.02
DDR1-245ENST00000484556 BRDTQ58F21 947 aaPredicted RBP21.42■■□□□ 1.02
DDR1-245ENST00000484556 GDF6Q6KF10 455 aaPredicted RBP21.42■■□□□ 1.02
DDR1-245ENST00000484556 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.42■■□□□ 1.02
DDR1-245ENST00000484556 RAD50Q92878 1312 aa21.42■■□□□ 1.02
DDR1-245ENST00000484556 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.42■■□□□ 1.024e-7■■■■□ 23.1
DDR1-245ENST00000484556 PUS7LQ9H0K6 701 aaKnown RBP21.42■■□□□ 1.02
DDR1-245ENST00000484556 MTMR4Q9NYA4 1195 aa21.42■■□□□ 1.02
DDR1-245ENST00000484556 SPTBN4Q9H254 2564 aa21.42■■□□□ 1.02
DDR1-245ENST00000484556 MICAL3Q7RTP6 2002 aa21.41■■□□□ 1.02
DDR1-245ENST00000484556 ZFHX2Q9C0A1 2572 aaPredicted RBP21.41■■□□□ 1.02
DDR1-245ENST00000484556 RBM47A0AV96 593 aaKnown RBP21.41■■□□□ 1.02
DDR1-245ENST00000484556 PPP2R5BQ15173 497 aa21.41■■□□□ 1.02
DDR1-245ENST00000484556 EPC2Q52LR7 807 aa21.41■■□□□ 1.02
DDR1-245ENST00000484556 RHPN1Q8TCX5 695 aa21.41■■□□□ 1.02
DDR1-245ENST00000484556 PBXIP1Q96AQ6 731 aa21.41■■□□□ 1.02
DDR1-245ENST00000484556 BOLA2Q9H3K6 86 aa21.41■■□□□ 1.02
DDR1-245ENST00000484556 A6NJR5 290 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 TTLL1O95922 423 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 LTBRP36941 435 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 GPM6BQ13491 265 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 IKBKEQ14164 716 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 COL19A1Q14993 1142 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 CEP85Q6P2H3 762 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 RASGRP2Q7LDG7 609 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 RPAINQ86UA6 219 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 FAM160B2Q86V87 743 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 STAG1Q8WVM7 1258 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 EDAQ92838 391 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 NSUN3Q9H649 340 aaKnown RBP21.4■■□□□ 1.02
DDR1-245ENST00000484556 CCPG1Q9ULG6 757 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 INSL6Q9Y581 213 aa21.4■■□□□ 1.02
DDR1-245ENST00000484556 MYO15AQ9UKN7 3530 aa21.39■■□□□ 1.01
DDR1-245ENST00000484556 TMEM221A6NGB7 291 aa21.39■■□□□ 1.01
DDR1-245ENST00000484556 M0R296 226 aa21.39■■□□□ 1.01
DDR1-245ENST00000484556 KPNA6O60684 536 aa21.39■■□□□ 1.01
DDR1-245ENST00000484556 CKBP12277 381 aa21.39■■□□□ 1.01
DDR1-245ENST00000484556 BAATQ14032 418 aaPredicted RBP21.39■■□□□ 1.01
DDR1-245ENST00000484556 UBE3CQ15386 1083 aa21.39■■□□□ 1.01
DDR1-245ENST00000484556 SMAD2Q15796 467 aaKnown RBP21.39■■□□□ 1.01
DDR1-245ENST00000484556 SBK1Q52WX2 424 aa21.39■■□□□ 1.01
DDR1-245ENST00000484556 KCTD1Q719H9 257 aa21.39■■□□□ 1.01
DDR1-245ENST00000484556 CHURC1Q8WUH1 139 aa21.39■■□□□ 1.01
DDR1-245ENST00000484556 MYO7AQ13402 2215 aa21.39■■□□□ 1.01
DDR1-245ENST00000484556 IFIT2P09913 472 aaKnown RBP21.38■■□□□ 1.01
DDR1-245ENST00000484556 DLX2Q07687 328 aaPredicted RBP21.38■■□□□ 1.01
DDR1-245ENST00000484556 BMP8AQ7Z5Y6 402 aa21.38■■□□□ 1.01
DDR1-245ENST00000484556 SUGP1Q8IWZ8 645 aaKnown RBP21.38■■□□□ 1.01
DDR1-245ENST00000484556 MYOCDQ8IZQ8 938 aa21.38■■□□□ 1.01
DDR1-245ENST00000484556 ZNF444Q8N0Y2 327 aaPredicted RBP21.38■■□□□ 1.01
DDR1-245ENST00000484556 POP1Q99575 1024 aaKnown RBP21.38■■□□□ 1.01
DDR1-245ENST00000484556 ADD3Q9UEY8 706 aaKnown RBP21.38■■□□□ 1.01
DDR1-245ENST00000484556 SYNPO2Q9UMS6 1093 aa21.38■■□□□ 1.01
DDR1-245ENST00000484556 PLXNA3P51805 1871 aa21.38■■□□□ 1.01
DDR1-245ENST00000484556 H3BNC9 293 aa21.37■■□□□ 1.01
DDR1-245ENST00000484556 MBTPS2O43462 519 aa21.37■■□□□ 1.01
DDR1-245ENST00000484556 EFCAB14O75071 495 aa21.37■■□□□ 1.01
DDR1-245ENST00000484556 MCCP23508 829 aa21.37■■□□□ 1.01
DDR1-245ENST00000484556 SLC1A4P43007 532 aa21.37■■□□□ 1.01
DDR1-245ENST00000484556 ZKSCAN2Q63HK3 967 aa21.37■■□□□ 1.01
DDR1-245ENST00000484556 TRIM67Q6ZTA4 783 aa21.37■■□□□ 1.01
DDR1-245ENST00000484556 ITPRIPQ8IWB1 547 aa21.37■■□□□ 1.01
DDR1-245ENST00000484556 CLASRPQ8N2M8 674 aaKnown RBP21.37■■□□□ 1.01
DDR1-245ENST00000484556 SP7Q8TDD2 431 aaPredicted RBP21.37■■□□□ 1.01
DDR1-245ENST00000484556 PRRX2Q99811 253 aa21.37■■□□□ 1.01
DDR1-245ENST00000484556 PRR12Q9ULL5 1215 aa21.37■■□□□ 1.01
DDR1-245ENST00000484556 PTPDC1A2A3K4 754 aa21.36■■□□□ 1.01
DDR1-245ENST00000484556 GSG1L2A8MUP6 293 aa21.36■■□□□ 1.01
DDR1-245ENST00000484556 NFIBO00712 420 aa21.36■■□□□ 1.01
DDR1-245ENST00000484556 NKRFO15226 690 aaKnown RBP eCLIP21.36■■□□□ 1.01
DDR1-245ENST00000484556 HTRA4P83105 476 aaPredicted RBP21.36■■□□□ 1.01
DDR1-245ENST00000484556 RBL2Q08999 1139 aa21.36■■□□□ 1.01
DDR1-245ENST00000484556 MBTPS1Q14703 1052 aa21.36■■□□□ 1.01
DDR1-245ENST00000484556 SLC30A10Q6XR72 485 aa21.36■■□□□ 1.01
DDR1-245ENST00000484556 GMCL1Q96IK5 515 aa21.36■■□□□ 1.01
DDR1-245ENST00000484556 ALG13Q9NP73 1137 aaKnown RBP21.36■■□□□ 1.01
DDR1-245ENST00000484556 RALGAPA2Q2PPJ7 1873 aa21.35■■□□□ 1.01
DDR1-245ENST00000484556 PARNO95453 639 aaKnown RBP21.35■■□□□ 1.01
DDR1-245ENST00000484556 TXNP10599 105 aaKnown RBP21.35■■□□□ 1.01
DDR1-245ENST00000484556 TRAF7Q6Q0C0 670 aa21.35■■□□□ 1.01
DDR1-245ENST00000484556 WNT8BQ93098 351 aa21.35■■□□□ 1.01
DDR1-245ENST00000484556 STRBPQ96SI9 672 aaKnown RBP21.35■■□□□ 1.01
DDR1-245ENST00000484556 ARIH2O95376 493 aa21.34■■□□□ 1.01
DDR1-245ENST00000484556 AMHP03971 560 aa21.34■■□□□ 1.01
DDR1-245ENST00000484556 CALML3P27482 149 aa21.34■■□□□ 1.01
DDR1-245ENST00000484556 PDE4DQ08499 809 aa21.34■■□□□ 1.01
DDR1-245ENST00000484556 SESTD1Q86VW0 696 aa21.34■■□□□ 1.01
DDR1-245ENST00000484556 SCFD2Q8WU76 684 aa21.34■■□□□ 1.01
DDR1-245ENST00000484556 KAT2BQ92831 832 aa21.34■■□□□ 1.01
DDR1-245ENST00000484556 ATOH1Q92858 354 aaPredicted RBP21.34■■□□□ 1.01
DDR1-245ENST00000484556 SAMD11Q96NU1 681 aa21.34■■□□□ 1.01
DDR1-245ENST00000484556 EPB41L4AQ9HCS5 686 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms