RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 MCM3APO60318 1980 aa20.44■□□□□ 0.86
CPNE1-224ENST00000483359 NPY5RQ15761 445 aa20.44■□□□□ 0.86
CPNE1-224ENST00000483359 SLC9C1Q4G0N8 1177 aa20.44■□□□□ 0.86
CPNE1-224ENST00000483359 SLAIN1Q8ND83 568 aa20.44■□□□□ 0.86
CPNE1-224ENST00000483359 MCOLN1Q9GZU1 580 aa20.44■□□□□ 0.86
CPNE1-224ENST00000483359 PXMP2Q9NR77 195 aa20.44■□□□□ 0.86
CPNE1-224ENST00000483359 ARMCX2Q7L311 632 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 EEPD1Q7L9B9 569 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 SAMD3Q8N6K7 520 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 NSUN6Q8TEA1 469 aaKnown RBP20.43■□□□□ 0.86
CPNE1-224ENST00000483359 INTS4Q96HW7 963 aaKnown RBP20.43■□□□□ 0.86
CPNE1-224ENST00000483359 ZFP91Q96JP5 570 aaPredicted RBP20.43■□□□□ 0.86
CPNE1-224ENST00000483359 TINF2Q9BSI4 451 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 CLK2P49760 499 aaKnown RBP20.43■□□□□ 0.86
CPNE1-224ENST00000483359 BECN1Q14457 450 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 PKN2Q16513 984 aaKnown RBP20.43■□□□□ 0.86
CPNE1-224ENST00000483359 COL13A1Q5TAT6 717 aaPredicted RBP20.43■□□□□ 0.86
CPNE1-224ENST00000483359 BLIDQ8IZY5 108 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 DNERQ8NFT8 737 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 IL31RAQ8NI17 732 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 BICD2Q8TD16 824 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 OXER1Q8TDS5 423 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 PXYLP1Q8TE99 480 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 GLT8D2Q9H1C3 349 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 PCDHA6Q9UN73 950 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 KIF3AQ9Y496 699 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 PCDHA8Q9Y5H6 950 aa20.43■□□□□ 0.86
CPNE1-224ENST00000483359 MMP1P03956 469 aa20.42■□□□□ 0.86
CPNE1-224ENST00000483359 HMGCRP04035 888 aa20.42■□□□□ 0.86
CPNE1-224ENST00000483359 INHAP05111 366 aa20.42■□□□□ 0.86
CPNE1-224ENST00000483359 OLFML2BQ68BL8 750 aa20.42■□□□□ 0.86
CPNE1-224ENST00000483359 ANO3Q9BYT9 981 aa20.42■□□□□ 0.86
CPNE1-224ENST00000483359 MAF1Q9H063 256 aa20.42■□□□□ 0.86
CPNE1-224ENST00000483359 LRRC37A2A6NM11 1700 aa20.42■□□□□ 0.86
CPNE1-224ENST00000483359 MYCLP12524 364 aaPredicted RBP20.41■□□□□ 0.86
CPNE1-224ENST00000483359 PGM5Q15124 567 aa20.41■□□□□ 0.86
CPNE1-224ENST00000483359 PRAMEF19Q5SWL8 479 aa20.41■□□□□ 0.86
CPNE1-224ENST00000483359 ZNF467Q7Z7K2 595 aaPredicted RBP20.41■□□□□ 0.86
CPNE1-224ENST00000483359 ASB14A6NK59 587 aa20.41■□□□□ 0.86
CPNE1-224ENST00000483359 PRKAR2AP13861 404 aaKnown RBP20.41■□□□□ 0.86
CPNE1-224ENST00000483359 PDE4DQ08499 809 aa20.41■□□□□ 0.86
CPNE1-224ENST00000483359 NR5A1Q13285 461 aa20.41■□□□□ 0.86
CPNE1-224ENST00000483359 MFSD14CQ5VZR4 134 aa20.41■□□□□ 0.86
CPNE1-224ENST00000483359 FBXO16Q8IX29 292 aaPredicted RBP20.41■□□□□ 0.86
CPNE1-224ENST00000483359 PDCD2LQ9BRP1 358 aa20.41■□□□□ 0.86
CPNE1-224ENST00000483359 TSHZ2Q9NRE2 1034 aa20.41■□□□□ 0.86
CPNE1-224ENST00000483359 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.41■□□□□ 0.86
CPNE1-224ENST00000483359 KRT2P35908 639 aa20.4■□□□□ 0.86
CPNE1-224ENST00000483359 AP3B2Q13367 1082 aa20.4■□□□□ 0.86
CPNE1-224ENST00000483359 MAMDC4Q6UXC1 1216 aa20.4■□□□□ 0.86
CPNE1-224ENST00000483359 DIS3L2Q8IYB7 885 aaKnown RBP20.4■□□□□ 0.86
CPNE1-224ENST00000483359 TRMT44Q8IYL2 757 aaKnown RBP20.4■□□□□ 0.86
CPNE1-224ENST00000483359 DAGLBQ8NCG7 672 aa20.4■□□□□ 0.86
CPNE1-224ENST00000483359 FBXO18Q8NFZ0 1043 aa20.4■□□□□ 0.86
CPNE1-224ENST00000483359 BRMS1Q9HCU9 246 aa20.4■□□□□ 0.86
CPNE1-224ENST00000483359 ZHX1Q9UKY1 873 aaPredicted RBP20.4■□□□□ 0.86
CPNE1-224ENST00000483359 SYNGAP1Q96PV0 1343 aa20.39■□□□□ 0.86
CPNE1-224ENST00000483359 SNAI1O95863 264 aaPredicted RBP20.39■□□□□ 0.86
CPNE1-224ENST00000483359 NR3C2P08235 984 aa20.39■□□□□ 0.86
CPNE1-224ENST00000483359 ANP32AP39687 249 aaKnown RBP20.39■□□□□ 0.86
CPNE1-224ENST00000483359 CACNB2Q08289 660 aaPredicted RBP20.39■□□□□ 0.86
CPNE1-224ENST00000483359 LARP1BQ659C4 914 aaKnown RBP20.39■□□□□ 0.86
CPNE1-224ENST00000483359 GALNT17Q6IS24 598 aa20.39■□□□□ 0.86
CPNE1-224ENST00000483359 MPHOSPH6Q99547 160 aaKnown RBP20.39■□□□□ 0.86
CPNE1-224ENST00000483359 CNPY2Q9Y2B0 182 aa20.39■□□□□ 0.86
CPNE1-224ENST00000483359 RPTORQ8N122 1335 aa20.39■□□□□ 0.85
CPNE1-224ENST00000483359 BTBD18B2RXH4 712 aa20.39■□□□□ 0.85
CPNE1-224ENST00000483359 H3BQV1 296 aa20.39■□□□□ 0.85
CPNE1-224ENST00000483359 IFFO2Q5TF58 517 aa20.39■□□□□ 0.85
CPNE1-224ENST00000483359 FAM177A1Q8N128 213 aaPredicted RBP20.39■□□□□ 0.85
CPNE1-224ENST00000483359 FRMPD4Q14CM0 1322 aa20.38■□□□□ 0.85
CPNE1-224ENST00000483359 M0R2N6 131 aa20.38■□□□□ 0.85
CPNE1-224ENST00000483359 FOSP01100 380 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-224ENST00000483359 EDNRBP24530 442 aa20.38■□□□□ 0.85
CPNE1-224ENST00000483359 MSL3Q8N5Y2 521 aaKnown RBP20.38■□□□□ 0.85
CPNE1-224ENST00000483359 IGHA2P01877 340 aa20.37■□□□□ 0.85
CPNE1-224ENST00000483359 SAFBQ15424 915 aaKnown RBP eCLIP20.37■□□□□ 0.851e-17■■■■□ 20.2
CPNE1-224ENST00000483359 PIK3AP1Q6ZUJ8 805 aa20.37■□□□□ 0.85
CPNE1-224ENST00000483359 EHMT1Q9H9B1 1298 aa20.37■□□□□ 0.85
CPNE1-224ENST00000483359 RTEL1Q9NZ71 1219 aa20.37■□□□□ 0.85
CPNE1-224ENST00000483359 VPS37CA5D8V6 355 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-224ENST00000483359 FAM205CA6NFA0 338 aa20.37■□□□□ 0.85
CPNE1-224ENST00000483359 B4DLN1 442 aa20.37■□□□□ 0.85
CPNE1-224ENST00000483359 CNGA1P29973 690 aa20.37■□□□□ 0.85
CPNE1-224ENST00000483359 CCND2P30279 289 aa20.37■□□□□ 0.85
CPNE1-224ENST00000483359 CCND3P30281 292 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-224ENST00000483359 GNL2Q13823 731 aaKnown RBP20.37■□□□□ 0.85
CPNE1-224ENST00000483359 STXBP2Q15833 593 aa20.37■□□□□ 0.85
CPNE1-224ENST00000483359 EARS2Q5JPH6 523 aaKnown RBP20.37■□□□□ 0.85
CPNE1-224ENST00000483359 TRPV1Q8NER1 839 aa20.37■□□□□ 0.85
CPNE1-224ENST00000483359 IWS1Q96ST2 819 aa20.37■□□□□ 0.85
CPNE1-224ENST00000483359 CCDC194A0A1B0GVG4 234 aa20.36■□□□□ 0.85
CPNE1-224ENST00000483359 CYBAP13498 195 aa20.36■□□□□ 0.85
CPNE1-224ENST00000483359 ACVR2BQ13705 512 aa20.36■□□□□ 0.85
CPNE1-224ENST00000483359 MTFR1Q15390 333 aa20.36■□□□□ 0.85
CPNE1-224ENST00000483359 MCTP1Q6DN14 999 aa20.36■□□□□ 0.85
CPNE1-224ENST00000483359 MORC4Q8TE76 937 aa20.36■□□□□ 0.85
CPNE1-224ENST00000483359 ABHD16BQ9H3Z7 469 aa20.36■□□□□ 0.85
CPNE1-224ENST00000483359 KIF28PB7ZC32 967 aa20.35■□□□□ 0.85
CPNE1-224ENST00000483359 SREBF1P36956 1147 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms