RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 BADQ92934 168 aa17.43■□□□□ 0.38
TDP2-205ENST00000480495 PIGSQ96S52 555 aa17.43■□□□□ 0.38
TDP2-205ENST00000480495 RMDN3Q96TC7 470 aa17.43■□□□□ 0.38
TDP2-205ENST00000480495 CCDC69A6NI79 296 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 SOX1O00570 391 aaPredicted RBP17.42■□□□□ 0.38
TDP2-205ENST00000480495 SH2B2O14492 632 aaPredicted RBP17.42■□□□□ 0.38
TDP2-205ENST00000480495 OPLAHO14841 1288 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 TLR3O15455 904 aaKnown RBP17.42■□□□□ 0.38
TDP2-205ENST00000480495 CYTH3O43739 400 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 RAG1P15918 1043 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 SMARCA1P28370 1054 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 GNAQP50148 359 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 CPT1AP50416 773 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 TTLL4Q14679 1199 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 STXBP2Q15833 593 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 BRDTQ58F21 947 aaPredicted RBP17.42■□□□□ 0.38
TDP2-205ENST00000480495 ARHGEF16Q5VV41 709 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 GPR153Q6NV75 609 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 CXCL17Q6UXB2 119 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 NFXL1Q6ZNB6 911 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 SLC43A3Q8NBI5 491 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 OR6J1Q8NGC5 347 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 LZTS2Q9BRK4 669 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 POLR3EQ9NVU0 708 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 COL20A1Q9P218 1284 aa17.42■□□□□ 0.38
TDP2-205ENST00000480495 CALM1P0DP23 149 aa17.41■□□□□ 0.38
TDP2-205ENST00000480495 CALM2P0DP24 149 aa17.41■□□□□ 0.38
TDP2-205ENST00000480495 CALM3P0DP25 149 aa17.41■□□□□ 0.38
TDP2-205ENST00000480495 TXNP10599 105 aaKnown RBP17.41■□□□□ 0.38
TDP2-205ENST00000480495 PTGS1P23219 599 aa17.41■□□□□ 0.38
TDP2-205ENST00000480495 SPZ1Q9BXG8 430 aa17.41■□□□□ 0.38
TDP2-205ENST00000480495 GPHNQ9NQX3 736 aaPredicted RBP17.41■□□□□ 0.38
TDP2-205ENST00000480495 PXMP2Q9NR77 195 aa17.41■□□□□ 0.38
TDP2-205ENST00000480495 TBX21Q9UL17 535 aa17.41■□□□□ 0.38
TDP2-205ENST00000480495 LTBP2Q14767 1821 aa17.4■□□□□ 0.38
TDP2-205ENST00000480495 EIF3JO75822 258 aaKnown RBP17.4■□□□□ 0.38
TDP2-205ENST00000480495 ITGA7Q13683 1181 aa17.4■□□□□ 0.38
TDP2-205ENST00000480495 TSGA10IPQ3SY00 556 aa17.4■□□□□ 0.38
TDP2-205ENST00000480495 FAM126BQ8IXS8 530 aa17.4■□□□□ 0.38
TDP2-205ENST00000480495 LRCH3Q96II8 777 aa17.4■□□□□ 0.38
TDP2-205ENST00000480495 MYL10Q9BUA6 226 aa17.4■□□□□ 0.38
TDP2-205ENST00000480495 A6NJR5 290 aa17.39■□□□□ 0.37
TDP2-205ENST00000480495 GCOM1H8Y6P7 765 aaPredicted RBP17.39■□□□□ 0.37
TDP2-205ENST00000480495 KPNA6O60684 536 aa17.39■□□□□ 0.37
TDP2-205ENST00000480495 TIMP1P01033 207 aa17.39■□□□□ 0.37
TDP2-205ENST00000480495 CD4P01730 458 aa17.39■□□□□ 0.37
TDP2-205ENST00000480495 NR3C2P08235 984 aa17.39■□□□□ 0.37
TDP2-205ENST00000480495 POLR2MP0CAP2 368 aa17.39■□□□□ 0.37
TDP2-205ENST00000480495 EIF2AK2P19525 551 aaKnown RBP17.39■□□□□ 0.37
TDP2-205ENST00000480495 ITGB8P26012 769 aa17.39■□□□□ 0.37
TDP2-205ENST00000480495 KRT32Q14532 448 aa17.39■□□□□ 0.37
TDP2-205ENST00000480495 CCDC62Q6P9F0 684 aa17.39■□□□□ 0.37
TDP2-205ENST00000480495 RRP36Q96EU6 259 aaKnown RBP17.39■□□□□ 0.37
TDP2-205ENST00000480495 NEK1Q96PY6 1258 aa17.39■□□□□ 0.37
TDP2-205ENST00000480495 SLC12A7Q9Y666 1083 aa17.39■□□□□ 0.37
TDP2-205ENST00000480495 PURAQ00577 322 aaKnown RBP17.38■□□□□ 0.37
TDP2-205ENST00000480495 FPGSQ05932 587 aa17.38■□□□□ 0.37
TDP2-205ENST00000480495 COL9A3Q14050 684 aaPredicted RBP17.38■□□□□ 0.37
TDP2-205ENST00000480495 SEPT14Q6ZU15 432 aa17.38■□□□□ 0.37
TDP2-205ENST00000480495 SGMS1Q86VZ5 419 aa17.38■□□□□ 0.37
TDP2-205ENST00000480495 PDCD2LQ9BRP1 358 aa17.38■□□□□ 0.37
TDP2-205ENST00000480495 MTG1Q9BT17 334 aaPredicted RBP17.38■□□□□ 0.37
TDP2-205ENST00000480495 SEC63Q9UGP8 760 aaKnown RBP17.38■□□□□ 0.37
TDP2-205ENST00000480495 MYH6P13533 1939 aa17.38■□□□□ 0.37
TDP2-205ENST00000480495 GRIN2DO15399 1336 aa17.38■□□□□ 0.37
TDP2-205ENST00000480495 ARIH2O95376 493 aa17.37■□□□□ 0.37
TDP2-205ENST00000480495 GH1P01241 217 aa17.37■□□□□ 0.37
TDP2-205ENST00000480495 MYL3P08590 195 aa17.37■□□□□ 0.37
TDP2-205ENST00000480495 HOXA13P31271 388 aaPredicted RBP17.37■□□□□ 0.37
TDP2-205ENST00000480495 SHHQ15465 462 aa17.37■□□□□ 0.37
TDP2-205ENST00000480495 SYNE3Q6ZMZ3 975 aa17.37■□□□□ 0.37
TDP2-205ENST00000480495 DHX32Q7L7V1 743 aaKnown RBP17.37■□□□□ 0.37
TDP2-205ENST00000480495 COPS5Q92905 334 aa17.37■□□□□ 0.37
TDP2-205ENST00000480495 LRRC2Q9BYS8 371 aa17.37■□□□□ 0.37
TDP2-205ENST00000480495 HMGB1P09429 215 aaKnown RBP17.36■□□□□ 0.37
TDP2-205ENST00000480495 PSMC6P62333 389 aa17.36■□□□□ 0.37
TDP2-205ENST00000480495 EXOSC10Q01780 885 aaKnown RBP17.36■□□□□ 0.37
TDP2-205ENST00000480495 LY6KQ17RY6 165 aa17.36■□□□□ 0.37
TDP2-205ENST00000480495 MFSD5Q6N075 450 aa17.36■□□□□ 0.37
TDP2-205ENST00000480495 VSIG10LQ86VR7 867 aa17.36■□□□□ 0.37
TDP2-205ENST00000480495 RASEFQ8IZ41 740 aa17.36■□□□□ 0.37
TDP2-205ENST00000480495 SRBD1Q8N5C6 995 aaKnown RBP17.36■□□□□ 0.37
TDP2-205ENST00000480495 FANCBQ8NB91 859 aa17.36■□□□□ 0.37
TDP2-205ENST00000480495 PIBF1Q8WXW3 757 aa17.36■□□□□ 0.37
TDP2-205ENST00000480495 PLEKHA8P1O95397 391 aa17.35■□□□□ 0.37
TDP2-205ENST00000480495 MYCLP12524 364 aaPredicted RBP17.35■□□□□ 0.37
TDP2-205ENST00000480495 CCND2P30279 289 aa17.35■□□□□ 0.37
TDP2-205ENST00000480495 PGM5Q15124 567 aa17.35■□□□□ 0.37
TDP2-205ENST00000480495 C9orf50Q5SZB4 431 aa17.35■□□□□ 0.37
TDP2-205ENST00000480495 KCNV1Q6PIU1 500 aa17.35■□□□□ 0.37
TDP2-205ENST00000480495 FCHSD1Q86WN1 690 aa17.35■□□□□ 0.37
TDP2-205ENST00000480495 TMEM199Q8N511 208 aa17.35■□□□□ 0.37
TDP2-205ENST00000480495 ALDH8A1Q9H2A2 487 aaPredicted RBP17.35■□□□□ 0.37
TDP2-205ENST00000480495 DDX41Q9UJV9 622 aaKnown RBP17.35■□□□□ 0.37
TDP2-205ENST00000480495 MRVI1Q9Y6F6 885 aa17.35■□□□□ 0.37
TDP2-205ENST00000480495 B4GALT4O60513 344 aa17.34■□□□□ 0.37
TDP2-205ENST00000480495 SUPT20HL2P0C7V6 817 aa17.34■□□□□ 0.37
TDP2-205ENST00000480495 RXRAP19793 462 aa17.34■□□□□ 0.37
TDP2-205ENST00000480495 ARHGAP1Q07960 439 aa17.34■□□□□ 0.37
TDP2-205ENST00000480495 PPIGQ13427 754 aaKnown RBP eCLIP17.34■□□□□ 0.373e-8■□□□□ 9.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms