RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 TAAR1Q96RJ0 339 aa19.99■□□□□ 0.79
UPF3A-206ENST00000480362 A1CFQ9NQ94 594 aaKnown RBP19.99■□□□□ 0.79
UPF3A-206ENST00000480362 MORF4L1Q9UBU8 362 aa19.99■□□□□ 0.79
UPF3A-206ENST00000480362 MRVI1Q9Y6F6 885 aa19.99■□□□□ 0.79
UPF3A-206ENST00000480362 RBBP6Q7Z6E9 1792 aaKnown RBP19.98■□□□□ 0.79
UPF3A-206ENST00000480362 GOLGA6L4A6NEF3 574 aa19.98■□□□□ 0.79
UPF3A-206ENST00000480362 TDP2O95551 362 aa19.98■□□□□ 0.79
UPF3A-206ENST00000480362 UBE2HP62256 183 aa19.98■□□□□ 0.79
UPF3A-206ENST00000480362 ATP2C1P98194 919 aaPredicted RBP19.98■□□□□ 0.79
UPF3A-206ENST00000480362 ORC2Q13416 577 aaPredicted RBP19.98■□□□□ 0.79
UPF3A-206ENST00000480362 TAF1CQ15572 869 aaPredicted RBP19.98■□□□□ 0.79
UPF3A-206ENST00000480362 PPP4R3AQ6IN85 833 aa19.98■□□□□ 0.79
UPF3A-206ENST00000480362 CAPNS2Q96L46 248 aa19.98■□□□□ 0.79
UPF3A-206ENST00000480362 NAP1L4Q99733 375 aaKnown RBP19.98■□□□□ 0.79
UPF3A-206ENST00000480362 R3HDMLQ9H3Y0 253 aa19.98■□□□□ 0.79
UPF3A-206ENST00000480362 CYP39A1Q9NYL5 469 aa19.98■□□□□ 0.79
UPF3A-206ENST00000480362 MORC2Q9Y6X9 1032 aaPredicted RBP19.98■□□□□ 0.79
UPF3A-206ENST00000480362 MYH7BA7E2Y1 1941 aa19.98■□□□□ 0.79
UPF3A-206ENST00000480362 CYP3A4P08684 503 aa19.97■□□□□ 0.79
UPF3A-206ENST00000480362 GCFC2P16383 781 aaKnown RBP19.97■□□□□ 0.79
UPF3A-206ENST00000480362 UBXN2AP68543 259 aa19.97■□□□□ 0.79
UPF3A-206ENST00000480362 CCNA1P78396 465 aa19.97■□□□□ 0.79
UPF3A-206ENST00000480362 NOGQ13253 232 aa19.97■□□□□ 0.79
UPF3A-206ENST00000480362 ANKRD35Q8N283 1001 aa19.97■□□□□ 0.79
UPF3A-206ENST00000480362 SHCBP1Q8NEM2 672 aa19.97■□□□□ 0.79
UPF3A-206ENST00000480362 PURBQ96QR8 312 aaKnown RBP19.97■□□□□ 0.79
UPF3A-206ENST00000480362 TMEM60Q9H2L4 133 aa19.97■□□□□ 0.79
UPF3A-206ENST00000480362 MROH8Q9H579 483 aa19.97■□□□□ 0.79
UPF3A-206ENST00000480362 RPTORQ8N122 1335 aa19.97■□□□□ 0.79
UPF3A-206ENST00000480362 CYP3A7-CYP3A51PA0A087WV96 503 aa19.96■□□□□ 0.79
UPF3A-206ENST00000480362 NEMFO60524 1076 aa19.96■□□□□ 0.79
UPF3A-206ENST00000480362 CUTAO60888 179 aa19.96■□□□□ 0.79
UPF3A-206ENST00000480362 PTPREP23469 700 aa19.96■□□□□ 0.79
UPF3A-206ENST00000480362 CYP3A7P24462 503 aa19.96■□□□□ 0.79
UPF3A-206ENST00000480362 AXDND1Q5T1B0 1012 aaPredicted RBP19.96■□□□□ 0.79
UPF3A-206ENST00000480362 ADALQ6DHV7 355 aa19.96■□□□□ 0.79
UPF3A-206ENST00000480362 MOXD1Q6UVY6 613 aa19.96■□□□□ 0.79
UPF3A-206ENST00000480362 KRI1Q8N9T8 703 aaKnown RBP19.96■□□□□ 0.79
UPF3A-206ENST00000480362 PORCNQ9H237 461 aa19.96■□□□□ 0.79
UPF3A-206ENST00000480362 DDX25Q9UHL0 483 aaKnown RBP19.96■□□□□ 0.79
UPF3A-206ENST00000480362 FBXO2Q9UK22 296 aaPredicted RBP19.96■□□□□ 0.79
UPF3A-206ENST00000480362 SLC37A4O43826 429 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 AOC2O75106 756 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 CIITAP33076 1130 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 ZNF76P36508 570 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 WDR78Q5VTH9 848 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 ARHGEF16Q5VV41 709 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.95■□□□□ 0.78
UPF3A-206ENST00000480362 POTEDQ86YR6 584 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 MBOAT7Q96N66 472 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 CLIC6Q96NY7 704 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 RMDN3Q96TC7 470 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 EFCC1Q9HA90 598 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 ZFYVE28Q9HCC9 887 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 PXMP2Q9NR77 195 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 CPA4Q9UI42 421 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 SRPRBQ9Y5M8 271 aaKnown RBP19.95■□□□□ 0.78
UPF3A-206ENST00000480362 DDX49Q9Y6V7 483 aaKnown RBP19.95■□□□□ 0.78
UPF3A-206ENST00000480362 PFASO15067 1338 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 ADGRA2Q96PE1 1338 aa19.95■□□□□ 0.78
UPF3A-206ENST00000480362 LAD1O00515 517 aa19.94■□□□□ 0.78
UPF3A-206ENST00000480362 TRAK2O60296 914 aa19.94■□□□□ 0.78
UPF3A-206ENST00000480362 EIF2AK2P19525 551 aaKnown RBP19.94■□□□□ 0.78
UPF3A-206ENST00000480362 FAM110CQ1W6H9 321 aa19.94■□□□□ 0.78
UPF3A-206ENST00000480362 SKOR2Q2VWA4 1001 aaPredicted RBP19.94■□□□□ 0.78
UPF3A-206ENST00000480362 ARL6IP4Q66PJ3 421 aaKnown RBP19.94■□□□□ 0.78
UPF3A-206ENST00000480362 GPT2Q8TD30 523 aa19.94■□□□□ 0.78
UPF3A-206ENST00000480362 FERMT2Q96AC1 680 aa19.94■□□□□ 0.78
UPF3A-206ENST00000480362 MMP19Q99542 508 aa19.94■□□□□ 0.78
UPF3A-206ENST00000480362 FRMPD4Q14CM0 1322 aa19.94■□□□□ 0.78
UPF3A-206ENST00000480362 A0A1W2PQ27 194 aa19.93■□□□□ 0.78
UPF3A-206ENST00000480362 A0A1W2PQ64 194 aa19.93■□□□□ 0.78
UPF3A-206ENST00000480362 A0A1W2PQD8 194 aa19.93■□□□□ 0.78
UPF3A-206ENST00000480362 MBD3O95983 291 aa19.93■□□□□ 0.78
UPF3A-206ENST00000480362 OR52Z1P0C646 297 aa19.93■□□□□ 0.78
UPF3A-206ENST00000480362 CNTN2Q02246 1040 aa19.93■□□□□ 0.78
UPF3A-206ENST00000480362 GRIN1Q05586 938 aa19.93■□□□□ 0.78
UPF3A-206ENST00000480362 KCTD2Q14681 263 aa19.93■□□□□ 0.78
UPF3A-206ENST00000480362 PGM5Q15124 567 aa19.93■□□□□ 0.78
UPF3A-206ENST00000480362 CALCRLQ16602 461 aa19.93■□□□□ 0.78
UPF3A-206ENST00000480362 CCAR1Q8IX12 1150 aaKnown RBP19.93■□□□□ 0.78
UPF3A-206ENST00000480362 IL31RAQ8NI17 732 aa19.93■□□□□ 0.78
UPF3A-206ENST00000480362 ZFP91Q96JP5 570 aaPredicted RBP19.93■□□□□ 0.78
UPF3A-206ENST00000480362 FAM86B1E9PN63 330 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 POTEB2H3BUK9 544 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 TLR2O60603 784 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 FAM86B2P0C5J1 330 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 BCRP11274 1271 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 FCER1AP12319 257 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 MYCLP12524 364 aaPredicted RBP19.92■□□□□ 0.78
UPF3A-206ENST00000480362 PRPHP41219 470 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 IL17AQ16552 155 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 Q4G0T1 1027 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 PRR16Q569H4 304 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 PCNX4Q63HM2 1172 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 DTHD1Q6ZMT9 781 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 REM2Q8IYK8 340 aaPredicted RBP19.92■□□□□ 0.78
UPF3A-206ENST00000480362 NSUN6Q8TEA1 469 aaKnown RBP19.92■□□□□ 0.78
UPF3A-206ENST00000480362 MTMR9Q96QG7 549 aa19.92■□□□□ 0.78
UPF3A-206ENST00000480362 PDCD2LQ9BRP1 358 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms