RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 NUP58Q9BVL2 599 aa21.37■■□□□ 1.01
TNFRSF8-204ENST00000479933 BRWD3Q6RI45 1802 aa21.37■■□□□ 1.01
TNFRSF8-204ENST00000479933 CC2D1AQ6P1N0 951 aaPredicted RBP21.36■■□□□ 1.01
TNFRSF8-204ENST00000479933 RETREG2Q8NC44 543 aa21.36■■□□□ 1.01
TNFRSF8-204ENST00000479933 COA7Q96BR5 231 aa21.36■■□□□ 1.01
TNFRSF8-204ENST00000479933 CDK5RAP3Q96JB5 506 aa21.36■■□□□ 1.01
TNFRSF8-204ENST00000479933 NAP1L4Q99733 375 aaKnown RBP21.36■■□□□ 1.01
TNFRSF8-204ENST00000479933 GLT8D2Q9H1C3 349 aa21.36■■□□□ 1.01
TNFRSF8-204ENST00000479933 JMJD4Q9H9V9 463 aa21.36■■□□□ 1.01
TNFRSF8-204ENST00000479933 GPCPD1Q9NPB8 672 aa21.36■■□□□ 1.01
TNFRSF8-204ENST00000479933 RNF216Q9NWF9 866 aaPredicted RBP21.36■■□□□ 1.01
TNFRSF8-204ENST00000479933 LUC7L2Q9Y383 392 aaKnown RBP21.36■■□□□ 1.01
TNFRSF8-204ENST00000479933 PVALEFA0A1B0GWK0 134 aa21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 SHMT1P34896 483 aa21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 MRPL12P52815 198 aaKnown RBP21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 ERVK-24P63145 666 aa21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 TUBB4BP68371 445 aa21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 PPP4R3AQ6IN85 833 aa21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 CDC42EP5Q6NZY7 148 aa21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 GPR161Q8N6U8 529 aaKnown RBP21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 DNAJC7Q99615 494 aa21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 DUSP9Q99956 384 aaKnown RBP21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 CAPN11Q9UMQ6 739 aa21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 MYH4Q9Y623 1939 aa21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 SASH3O75995 380 aa21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 ADGRF4Q8IZF3 695 aa21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 CUL5Q93034 780 aa21.35■■□□□ 1.01
TNFRSF8-204ENST00000479933 CLGNO14967 610 aa21.34■■□□□ 1.01
TNFRSF8-204ENST00000479933 MSL3Q8N5Y2 521 aaKnown RBP21.34■■□□□ 1.01
TNFRSF8-204ENST00000479933 IQCDQ96DY2 449 aa21.34■■□□□ 1.01
TNFRSF8-204ENST00000479933 TUBGCP2Q9BSJ2 902 aa21.34■■□□□ 1.01
TNFRSF8-204ENST00000479933 MRIQ9BWK5 157 aa21.34■■□□□ 1.01
TNFRSF8-204ENST00000479933 JRKLQ9Y4A0 524 aa21.34■■□□□ 1.01
TNFRSF8-204ENST00000479933 GCFC2P16383 781 aaKnown RBP21.34■■□□□ 1.01
TNFRSF8-204ENST00000479933 GRB10Q13322 594 aa21.34■■□□□ 1.01
TNFRSF8-204ENST00000479933 TTC31Q49AM3 519 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF8-204ENST00000479933 RABGGTAQ92696 567 aa21.34■■□□□ 1.01
TNFRSF8-204ENST00000479933 TTC26A0AVF1 554 aa21.33■■□□□ 1.01
TNFRSF8-204ENST00000479933 PES1O00541 588 aaKnown RBP21.33■■□□□ 1.01
TNFRSF8-204ENST00000479933 EIF6P56537 245 aaKnown RBP21.33■■□□□ 1.01
TNFRSF8-204ENST00000479933 STK4Q13043 487 aa21.33■■□□□ 1.01
TNFRSF8-204ENST00000479933 KRT79Q5XKE5 535 aa21.33■■□□□ 1.01
TNFRSF8-204ENST00000479933 UNC13DQ70J99 1090 aa21.33■■□□□ 1.01
TNFRSF8-204ENST00000479933 RSRC2Q7L4I2 434 aaKnown RBP21.33■■□□□ 1.01
TNFRSF8-204ENST00000479933 GOLGA1Q92805 767 aa21.33■■□□□ 1.01
TNFRSF8-204ENST00000479933 MASTLQ96GX5 879 aa21.33■■□□□ 1.01
TNFRSF8-204ENST00000479933 CTAGE9A4FU28 777 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 RNF225M0QZC1 329 aaPredicted RBP21.32■■□□□ 1
TNFRSF8-204ENST00000479933 ZBTB5O15062 677 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 HSPA1LP34931 641 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 CLK2P49760 499 aaKnown RBP21.32■■□□□ 1
TNFRSF8-204ENST00000479933 DOK7Q18PE1 504 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 ZNF569Q5MCW4 686 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 ANKRD40Q6AI12 368 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 APOBEC3HQ6NTF7 200 aaKnown RBP21.32■■□□□ 1
TNFRSF8-204ENST00000479933 PODNQ7Z5L7 613 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 PROM2Q8N271 834 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 FLAD1Q8NFF5 587 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 LARP4BQ92615 738 aaKnown RBP21.32■■□□□ 1
TNFRSF8-204ENST00000479933 MTMR8Q96EF0 704 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 DHX36Q9H2U1 1008 aaKnown RBP21.32■■□□□ 1
TNFRSF8-204ENST00000479933 FGFR1OPO95684 399 aaKnown RBP21.32■■□□□ 1
TNFRSF8-204ENST00000479933 SCNN1DP51172 638 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 FKBP1AP62942 108 aaKnown RBP21.32■■□□□ 1
TNFRSF8-204ENST00000479933 CCDC96Q2M329 555 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 CEP112Q8N8E3 955 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 ACRBPQ8NEB7 543 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 CNOT6LQ96LI5 555 aaKnown RBP21.32■■□□□ 1
TNFRSF8-204ENST00000479933 PNMA5Q96PV4 448 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 BLOC1S4Q9NUP1 217 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 CDC23Q9UJX2 597 aa21.32■■□□□ 1
TNFRSF8-204ENST00000479933 EPN1Q9Y6I3 576 aaPredicted RBP21.32■■□□□ 1
TNFRSF8-204ENST00000479933 MPHOSPH10O00566 681 aaKnown RBP21.31■■□□□ 1
TNFRSF8-204ENST00000479933 SLC37A4O43826 429 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 TDP2O95551 362 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 TNNI2P48788 182 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 GYS2P54840 703 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 SUGP1Q8IWZ8 645 aaKnown RBP21.31■■□□□ 1
TNFRSF8-204ENST00000479933 ZBTB9Q96C00 473 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 ZDHHC15Q96MV8 337 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 IRX2Q9BZI1 471 aaPredicted RBP21.31■■□□□ 1
TNFRSF8-204ENST00000479933 ADAM21Q9UKJ8 722 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 SLC26A4O43511 780 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 NDUFA10O95299 355 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 CRKP46108 304 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 MTIF2P46199 727 aaKnown RBP21.31■■□□□ 1
TNFRSF8-204ENST00000479933 HDLBPQ00341 1268 aaKnown RBP21.31■■□□□ 1
TNFRSF8-204ENST00000479933 PSMD2Q13200 908 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 CENPPQ6IPU0 288 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 FOXR2Q6PJQ5 311 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 RAD54LQ92698 747 aa21.31■■□□□ 1
TNFRSF8-204ENST00000479933 ZNHIT6Q9NWK9 470 aaKnown RBP21.31■■□□□ 1
TNFRSF8-204ENST00000479933 COL11A2P13942 1736 aaPredicted RBP21.3■■□□□ 1
TNFRSF8-204ENST00000479933 ADAMTSL1Q8N6G6 1762 aa21.3■■□□□ 1
TNFRSF8-204ENST00000479933 SEC31AO94979 1220 aaKnown RBP21.3■■□□□ 1
TNFRSF8-204ENST00000479933 TBC1D8BQ0IIM8 1120 aa21.3■■□□□ 1
TNFRSF8-204ENST00000479933 SEPT2Q15019 361 aa21.3■■□□□ 1
TNFRSF8-204ENST00000479933 TMEM119Q4V9L6 283 aa21.3■■□□□ 1
TNFRSF8-204ENST00000479933 FIGNQ5HY92 759 aa21.3■■□□□ 1
TNFRSF8-204ENST00000479933 LEKR1Q6ZMV7 388 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms