RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 PCDHB15Q9Y5E8 787 aa12.98□□□□□ -0.33
HDLBP-237ENST00000479169 SALL3Q9BXA9 1300 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 LOC102724159A0A0B4J2E5 919 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 ARIH2O95376 493 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 FGRP09769 529 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 PDHBP11177 359 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 ACTN1P12814 892 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 POU3F3P20264 500 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-237ENST00000479169 EDNRBP24530 442 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 RFC2P35250 354 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 PLA2G5P39877 138 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 PWP2Q15269 919 aaKnown RBP12.97□□□□□ -0.33
HDLBP-237ENST00000479169 AAK1Q2M2I8 961 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 NFRKBQ6P4R8 1299 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 HERC6Q8IVU3 1022 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 RETREG2Q8NC44 543 aa12.97□□□□□ -0.33
HDLBP-237ENST00000479169 RAD50Q92878 1312 aa12.96□□□□□ -0.33
HDLBP-237ENST00000479169 A6NJR5 290 aa12.96□□□□□ -0.33
HDLBP-237ENST00000479169 NKRFO15226 690 aaKnown RBP eCLIP12.96□□□□□ -0.33
HDLBP-237ENST00000479169 HAND2P61296 217 aa12.96□□□□□ -0.33
HDLBP-237ENST00000479169 ZNF543Q08ER8 600 aa12.96□□□□□ -0.33
HDLBP-237ENST00000479169 ALX1Q15699 326 aa12.96□□□□□ -0.33
HDLBP-237ENST00000479169 BRDTQ58F21 947 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-237ENST00000479169 TMCO2Q7Z6W1 182 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-237ENST00000479169 SCFD2Q8WU76 684 aa12.96□□□□□ -0.33
HDLBP-237ENST00000479169 FAM227BQ96M60 508 aa12.96□□□□□ -0.33
HDLBP-237ENST00000479169 SIP14410 1827 aa12.95□□□□□ -0.34
HDLBP-237ENST00000479169 A0A0D9SFI3 127 aa12.95□□□□□ -0.34
HDLBP-237ENST00000479169 LCHNA4D1U4 455 aa12.95□□□□□ -0.34
HDLBP-237ENST00000479169 FGAP02671 866 aa12.95□□□□□ -0.34
HDLBP-237ENST00000479169 TXNP10599 105 aaKnown RBP12.95□□□□□ -0.34
HDLBP-237ENST00000479169 GRB10Q13322 594 aa12.95□□□□□ -0.34
HDLBP-237ENST00000479169 BFSP2Q13515 415 aa12.95□□□□□ -0.34
HDLBP-237ENST00000479169 USH1GQ495M9 461 aa12.95□□□□□ -0.34
HDLBP-237ENST00000479169 PHOSPHO2Q8TCD6 241 aa12.95□□□□□ -0.34
HDLBP-237ENST00000479169 CTAGE1Q96RT6 745 aa12.95□□□□□ -0.34
HDLBP-237ENST00000479169 CPVLQ9H3G5 476 aa12.95□□□□□ -0.34
HDLBP-237ENST00000479169 EPHX3Q9H6B9 360 aa12.95□□□□□ -0.34
HDLBP-237ENST00000479169 NOD1Q9Y239 953 aa12.95□□□□□ -0.34
HDLBP-237ENST00000479169 LAMA4Q16363 1823 aa12.95□□□□□ -0.34
HDLBP-237ENST00000479169 WDR19Q8NEZ3 1342 aa12.94□□□□□ -0.34
HDLBP-237ENST00000479169 TLL1O43897 1013 aa12.94□□□□□ -0.34
HDLBP-237ENST00000479169 KPNA6O60684 536 aa12.94□□□□□ -0.34
HDLBP-237ENST00000479169 LPXNO60711 386 aa12.94□□□□□ -0.34
HDLBP-237ENST00000479169 WDR5P61964 334 aaKnown RBP12.94□□□□□ -0.34
HDLBP-237ENST00000479169 PTPN11Q06124 597 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-237ENST00000479169 GPNMBQ14956 572 aa12.94□□□□□ -0.34
HDLBP-237ENST00000479169 PTGISQ16647 500 aa12.94□□□□□ -0.34
HDLBP-237ENST00000479169 GDF6Q6KF10 455 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-237ENST00000479169 ZNF589Q86UQ0 364 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-237ENST00000479169 DNERQ8NFT8 737 aa12.94□□□□□ -0.34
HDLBP-237ENST00000479169 AFG1LQ8WV93 481 aa12.94□□□□□ -0.34
HDLBP-237ENST00000479169 TBC1D5Q92609 795 aa12.94□□□□□ -0.34
HDLBP-237ENST00000479169 FAM122AQ96E09 287 aa12.94□□□□□ -0.34
HDLBP-237ENST00000479169 C1QTNF1Q9BXJ1 281 aa12.94□□□□□ -0.34
HDLBP-237ENST00000479169 TCP11L1Q9NUJ3 509 aa12.94□□□□□ -0.34
HDLBP-237ENST00000479169 MICAL3Q7RTP6 2002 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 KIF28PB7ZC32 967 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 BAIAP3O94812 1187 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 MMP3P08254 477 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 GOLGA8HP0CJ92 632 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 SNHG28P0DPA3 235 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 DEFB103AP81534 67 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 LY6KQ17RY6 165 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 TCTN1Q2MV58 587 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 CCDC62Q6P9F0 684 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 SEPT14Q6ZU15 432 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 TBC1D10CQ8IV04 446 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 GDPD5Q8WTR4 605 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 DHX38Q92620 1227 aaKnown RBP12.93□□□□□ -0.34
HDLBP-237ENST00000479169 KHSRPQ92945 711 aaKnown RBP eCLIP12.93□□□□□ -0.34
HDLBP-237ENST00000479169 EVI5LQ96CN4 794 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 MPHOSPH6Q99547 160 aaKnown RBP12.93□□□□□ -0.34
HDLBP-237ENST00000479169 UBA5Q9GZZ9 404 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 HELLSQ9NRZ9 838 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 COG5Q9UP83 839 aa12.93□□□□□ -0.34
HDLBP-237ENST00000479169 MYO7AQ13402 2215 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 HSPD1P10809 573 aaKnown RBP12.92□□□□□ -0.34
HDLBP-237ENST00000479169 KCNJ6P48051 423 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 ARHGAP1Q07960 439 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 ANKRD45Q5TZF3 282 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 LRRC8DQ7L1W4 858 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 CHST3Q7LGC8 479 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 CAGE1Q8TC20 777 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 AFAP1L1Q8TED9 768 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 KAT2BQ92831 832 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 HLA-CQ95604 372 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 TAAR1Q96RJ0 339 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 ZKSCAN3Q9BRR0 538 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 LRFN3Q9BTN0 628 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 COL20A1Q9P218 1284 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 PNMA2Q9UL42 364 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 MTUS1Q9ULD2 1270 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 MUC6Q6W4X9 2439 aa12.92□□□□□ -0.34
HDLBP-237ENST00000479169 NEDD4P46934 1319 aa12.91□□□□□ -0.34
HDLBP-237ENST00000479169 NBNO60934 754 aa12.91□□□□□ -0.34
HDLBP-237ENST00000479169 GH1P01241 217 aa12.91□□□□□ -0.34
HDLBP-237ENST00000479169 SELPP16109 830 aa12.91□□□□□ -0.34
HDLBP-237ENST00000479169 PDE1AP54750 535 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms