RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 RTN1Q16799 776 aa19.61■□□□□ 0.73
CDKN1A-207ENST00000478800 CMTR1Q8N1G2 835 aaKnown RBP19.61■□□□□ 0.73
CDKN1A-207ENST00000478800 CCDC82Q8N4S0 544 aa19.61■□□□□ 0.73
CDKN1A-207ENST00000478800 SCFD2Q8WU76 684 aa19.61■□□□□ 0.73
CDKN1A-207ENST00000478800 COLQQ9Y215 455 aaPredicted RBP19.61■□□□□ 0.73
CDKN1A-207ENST00000478800 GNEQ9Y223 722 aaKnown RBP19.61■□□□□ 0.73
CDKN1A-207ENST00000478800 MYADML2A6NDP7 307 aa19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 EIF5BO60841 1220 aaKnown RBP19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 ASGR1P07306 291 aa19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 CASTP20810 708 aaKnown RBP19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 HOXA13P31271 388 aaPredicted RBP19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 BEX3Q00994 111 aa19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 TRIM60Q495X7 471 aa19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 DUSP28Q4G0W2 176 aa19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 BRDTQ58F21 947 aaPredicted RBP19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 Q6ZUG5 572 aa19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 TMTC3Q6ZXV5 915 aa19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 CUL5Q93034 780 aa19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 PXMP2Q9NR77 195 aa19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 COL20A1Q9P218 1284 aa19.6■□□□□ 0.73
CDKN1A-207ENST00000478800 RBM47A0AV96 593 aaKnown RBP19.59■□□□□ 0.73
CDKN1A-207ENST00000478800 GOLGA8AA7E2F4 631 aa19.59■□□□□ 0.73
CDKN1A-207ENST00000478800 GOLGA8BA8MQT2 603 aa19.59■□□□□ 0.73
CDKN1A-207ENST00000478800 OPLAHO14841 1288 aa19.59■□□□□ 0.73
CDKN1A-207ENST00000478800 NKRFO15226 690 aaKnown RBP eCLIP19.59■□□□□ 0.733e-7■■■□□ 18.5
CDKN1A-207ENST00000478800 CPA1P15085 419 aa19.59■□□□□ 0.73
CDKN1A-207ENST00000478800 GHRHRQ02643 423 aa19.59■□□□□ 0.73
CDKN1A-207ENST00000478800 TTLL4Q14679 1199 aa19.59■□□□□ 0.73
CDKN1A-207ENST00000478800 FSCN1Q16658 493 aaKnown RBP19.59■□□□□ 0.73
CDKN1A-207ENST00000478800 C1orf53Q5VUE5 145 aa19.59■□□□□ 0.73
CDKN1A-207ENST00000478800 FCHSD1Q86WN1 690 aa19.59■□□□□ 0.73
CDKN1A-207ENST00000478800 BRPF3Q9ULD4 1205 aa19.59■□□□□ 0.73
CDKN1A-207ENST00000478800 SMCHD1A6NHR9 2005 aa19.59■□□□□ 0.73
CDKN1A-207ENST00000478800 ELP1O95163 1332 aa19.58■□□□□ 0.73
CDKN1A-207ENST00000478800 CCDC196A0A1B0GTZ2 297 aa19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 EIF3JO75822 258 aaKnown RBP19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 NR3C2P08235 984 aa19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 TXNP10599 105 aaKnown RBP19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 RPS6KB1P23443 525 aa19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 NKX3-2P78367 333 aa19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 IRX5P78411 483 aaPredicted RBP19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 SNX17Q15036 470 aa19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 CCSAPQ6IQ19 270 aaPredicted RBP19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 SEPT14Q6ZU15 432 aa19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 OR6J1Q8NGC5 347 aa19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 SMARCC2Q8TAQ2 1214 aa19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 BRF1Q92994 677 aa19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 LBHD1Q9BQE6 289 aaPredicted RBP19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 USP26Q9BXU7 913 aa19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 PRDM5Q9NQX1 630 aaPredicted RBP19.58■□□□□ 0.72
CDKN1A-207ENST00000478800 PQBP1O60828 265 aaKnown RBP19.57■□□□□ 0.72
CDKN1A-207ENST00000478800 CABYRO75952 493 aa19.57■□□□□ 0.72
CDKN1A-207ENST00000478800 MYCLP12524 364 aaPredicted RBP19.57■□□□□ 0.72
CDKN1A-207ENST00000478800 CPT1AP50416 773 aa19.57■□□□□ 0.72
CDKN1A-207ENST00000478800 METAP2P50579 478 aaKnown RBP eCLIP19.57■□□□□ 0.72
CDKN1A-207ENST00000478800 RCAN1P53805 252 aa19.57■□□□□ 0.72
CDKN1A-207ENST00000478800 MCM3APO60318 1980 aa19.57■□□□□ 0.72
CDKN1A-207ENST00000478800 hCG_1642624A0A1W2PR95 340 aa19.56■□□□□ 0.72
CDKN1A-207ENST00000478800 DCDC2CA8MYV0 355 aa19.56■□□□□ 0.72
CDKN1A-207ENST00000478800 TLE2Q04725 743 aa19.56■□□□□ 0.72
CDKN1A-207ENST00000478800 APOBRQ0VD83 1088 aa19.56■□□□□ 0.72
CDKN1A-207ENST00000478800 CXCL17Q6UXB2 119 aa19.56■□□□□ 0.72
CDKN1A-207ENST00000478800 HEATR3Q7Z4Q2 680 aa19.56■□□□□ 0.72
CDKN1A-207ENST00000478800 PDCD2LQ9BRP1 358 aa19.56■□□□□ 0.72
CDKN1A-207ENST00000478800 CYP46A1Q9Y6A2 500 aa19.56■□□□□ 0.72
CDKN1A-207ENST00000478800 MROH7Q68CQ1 1323 aa19.55■□□□□ 0.72
CDKN1A-207ENST00000478800 TRIOBPQ9H2D6 2365 aa19.55■□□□□ 0.72
CDKN1A-207ENST00000478800 A0A0U1RQG5 324 aaPredicted RBP19.55■□□□□ 0.72
CDKN1A-207ENST00000478800 CTAGE5O15320 804 aa19.55■□□□□ 0.72
CDKN1A-207ENST00000478800 PTGS1P23219 599 aa19.55■□□□□ 0.72
CDKN1A-207ENST00000478800 CCND2P30279 289 aa19.55■□□□□ 0.72
CDKN1A-207ENST00000478800 TMEM63BQ5T3F8 832 aa19.55■□□□□ 0.72
CDKN1A-207ENST00000478800 RUFY3Q7L099 469 aa19.55■□□□□ 0.72
CDKN1A-207ENST00000478800 PSTPIP2Q9H939 334 aa19.55■□□□□ 0.72
CDKN1A-207ENST00000478800 POLR3EQ9NVU0 708 aa19.55■□□□□ 0.72
CDKN1A-207ENST00000478800 RBM27Q9P2N5 1060 aaKnown RBP19.55■□□□□ 0.72
CDKN1A-207ENST00000478800 MAGEA10P43363 369 aaPredicted RBP19.54■□□□□ 0.72
CDKN1A-207ENST00000478800 PGM5Q15124 567 aa19.54■□□□□ 0.72
CDKN1A-207ENST00000478800 MRVI1Q9Y6F6 885 aa19.54■□□□□ 0.72
CDKN1A-207ENST00000478800 V9GY48 417 aaPredicted RBP19.54■□□□□ 0.72
CDKN1A-207ENST00000478800 RANBP2P49792 3224 aaKnown RBP19.54■□□□□ 0.72
CDKN1A-207ENST00000478800 LCTP09848 1927 aa19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 MYH6P13533 1939 aa19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 TLR3O15455 904 aaKnown RBP19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 GH1P01241 217 aa19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 MYL3P08590 195 aa19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 CLTBP09497 229 aa19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 FXR1P51114 621 aaKnown RBP eCLIP19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 MDM2Q00987 491 aaPredicted RBP19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 KCNV1Q6PIU1 500 aa19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 VSIG10LQ86VR7 867 aa19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 FBXL16Q8N461 479 aa19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 COPS5Q92905 334 aa19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 TM6SF1Q9BZW5 370 aa19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 UBE2OQ9C0C9 1292 aaKnown RBP19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 ZSWIM6Q9HCJ5 1215 aa19.53■□□□□ 0.72
CDKN1A-207ENST00000478800 CNTNAP5Q8WYK1 1306 aa19.52■□□□□ 0.72
CDKN1A-207ENST00000478800 SZT2Q5T011 3432 aa19.52■□□□□ 0.72
CDKN1A-207ENST00000478800 LRRC37A2A6NM11 1700 aa19.52■□□□□ 0.72
CDKN1A-207ENST00000478800 ARVCFO00192 962 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms