RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 AKAP17AQ02040 695 aaKnown RBP9.15□□□□□ -0.94
DDX39B-218ENST00000478365 TNFAIP2Q03169 654 aa9.15□□□□□ -0.94
DDX39B-218ENST00000478365 TTLL4Q14679 1199 aa9.15□□□□□ -0.94
DDX39B-218ENST00000478365 LRRC41Q15345 812 aa9.15□□□□□ -0.94
DDX39B-218ENST00000478365 STXBP2Q15833 593 aa9.15□□□□□ -0.94
DDX39B-218ENST00000478365 CCDC144BQ3MJ40 725 aa9.15□□□□□ -0.94
DDX39B-218ENST00000478365 ARHGEF16Q5VV41 709 aa9.15□□□□□ -0.94
DDX39B-218ENST00000478365 Q6ZUG5 572 aa9.15□□□□□ -0.94
DDX39B-218ENST00000478365 NOL8Q76FK4 1167 aaKnown RBP9.15□□□□□ -0.94
DDX39B-218ENST00000478365 DPF3Q92784 378 aa9.15□□□□□ -0.94
DDX39B-218ENST00000478365 BRF1Q92994 677 aa9.15□□□□□ -0.94
DDX39B-218ENST00000478365 RMDN3Q96TC7 470 aa9.15□□□□□ -0.94
DDX39B-218ENST00000478365 LRRC2Q9BYS8 371 aa9.15□□□□□ -0.94
DDX39B-218ENST00000478365 AP5M1Q9H0R1 490 aa9.15□□□□□ -0.94
DDX39B-218ENST00000478365 PHF24Q9UPV7 400 aa9.15□□□□□ -0.94
DDX39B-218ENST00000478365 MKI67P46013 3256 aaKnown RBP9.14□□□□□ -0.95
DDX39B-218ENST00000478365 ELP1O95163 1332 aa9.14□□□□□ -0.95
DDX39B-218ENST00000478365 MROH7Q68CQ1 1323 aa9.14□□□□□ -0.95
DDX39B-218ENST00000478365 RBM47A0AV96 593 aaKnown RBP9.14□□□□□ -0.95
DDX39B-218ENST00000478365 RRP9O43818 475 aaKnown RBP9.14□□□□□ -0.95
DDX39B-218ENST00000478365 KPNA6O60684 536 aa9.14□□□□□ -0.95
DDX39B-218ENST00000478365 EIF3JO75822 258 aaKnown RBP9.14□□□□□ -0.95
DDX39B-218ENST00000478365 CPT1AP50416 773 aa9.14□□□□□ -0.95
DDX39B-218ENST00000478365 GNPTABQ3T906 1256 aa9.14□□□□□ -0.95
DDX39B-218ENST00000478365 DUSP28Q4G0W2 176 aa9.14□□□□□ -0.95
DDX39B-218ENST00000478365 PRAMEF19Q5SWL8 479 aa9.14□□□□□ -0.95
DDX39B-218ENST00000478365 C1orf53Q5VUE5 145 aa9.14□□□□□ -0.95
DDX39B-218ENST00000478365 SRBD1Q8N5C6 995 aaKnown RBP9.14□□□□□ -0.95
DDX39B-218ENST00000478365 IL17RAQ96F46 866 aa9.14□□□□□ -0.95
DDX39B-218ENST00000478365 ZNF274Q96GC6 653 aaPredicted RBP9.14□□□□□ -0.95
DDX39B-218ENST00000478365 MYL10Q9BUA6 226 aa9.14□□□□□ -0.95
DDX39B-218ENST00000478365 KATNBL1Q9H079 304 aa9.14□□□□□ -0.95
DDX39B-218ENST00000478365 ALDH8A1Q9H2A2 487 aaPredicted RBP9.14□□□□□ -0.95
DDX39B-218ENST00000478365 UPF2Q9HAU5 1272 aaKnown RBP9.14□□□□□ -0.95
DDX39B-218ENST00000478365 GPHNQ9NQX3 736 aaPredicted RBP9.14□□□□□ -0.95
DDX39B-218ENST00000478365 NAP1L2Q9ULW6 460 aaPredicted RBP9.14□□□□□ -0.95
DDX39B-218ENST00000478365 KIAA1217Q5T5P2 1943 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 CNTNAP5Q8WYK1 1306 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 SYNRGQ9UMZ2 1314 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 PPP1R11O60927 126 aaPredicted RBP9.13□□□□□ -0.95
DDX39B-218ENST00000478365 ADAMTS4O75173 837 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 CDKL5O76039 1030 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 PLEKHA8P1O95397 391 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 FOSP01100 380 aaPredicted RBP9.13□□□□□ -0.95
DDX39B-218ENST00000478365 NR3C2P08235 984 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 C6orf222P0C671 652 aaPredicted RBP9.13□□□□□ -0.95
DDX39B-218ENST00000478365 TGFB3P10600 412 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 TAL1P17542 331 aaPredicted RBP9.13□□□□□ -0.95
DDX39B-218ENST00000478365 CCND2P30279 289 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 MNX1P50219 401 aaPredicted RBP9.13□□□□□ -0.95
DDX39B-218ENST00000478365 SLC35G1Q2M3R5 365 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 TLK2Q86UE8 772 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 FBXO16Q8IX29 292 aaPredicted RBP9.13□□□□□ -0.95
DDX39B-218ENST00000478365 TRIM22Q8IYM9 498 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 KLHDC9Q8NEP7 349 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 CCDC148Q8NFR7 591 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 SMARCC2Q8TAQ2 1214 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 GLT1D1Q96MS3 346 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 RNF26Q9BY78 433 aaPredicted RBP9.13□□□□□ -0.95
DDX39B-218ENST00000478365 WDR11Q9BZH6 1224 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 PSTPIP2Q9H939 334 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 PXMP2Q9NR77 195 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 PDRG1Q9NUG6 133 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 POLR3EQ9NVU0 708 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 PRKAG2Q9UGJ0 569 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 BRPF3Q9ULD4 1205 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 TRIOBPQ9H2D6 2365 aa9.13□□□□□ -0.95
DDX39B-218ENST00000478365 ASTN1O14525 1302 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 FRMPD4Q14CM0 1322 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 ESYT2A0FGR8 921 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 SPDYE3A6NKU9 549 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 CPLX1O14810 134 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 IFNAR1P17181 557 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 RXRAP19793 462 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 ADCYAP1R1P41586 468 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 RBM10P98175 930 aaKnown RBP9.12□□□□□ -0.95
DDX39B-218ENST00000478365 APOBRQ0VD83 1088 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 AP3B2Q13367 1082 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 SNX17Q15036 470 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 FSCN1Q16658 493 aaKnown RBP9.12□□□□□ -0.95
DDX39B-218ENST00000478365 GNASQ5JWF2 1037 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 GJC2Q5T442 439 aaPredicted RBP9.12□□□□□ -0.95
DDX39B-218ENST00000478365 TAPT1Q6NXT6 567 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 HEATR3Q7Z4Q2 680 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 BICD2Q8TD16 824 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 DIS3LQ8TF46 1054 aaKnown RBP9.12□□□□□ -0.95
DDX39B-218ENST00000478365 CDHR1Q96JP9 859 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 TCEANC2Q96MN5 208 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 PDCD2LQ9BRP1 358 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 SENP6Q9GZR1 1112 aaPredicted RBP9.12□□□□□ -0.95
DDX39B-218ENST00000478365 STARD7Q9NQZ5 370 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 BARHL2Q9NY43 387 aa9.12□□□□□ -0.95
DDX39B-218ENST00000478365 GNEQ9Y223 722 aaKnown RBP9.12□□□□□ -0.95
DDX39B-218ENST00000478365 A0A0U1RQG5 324 aaPredicted RBP9.11□□□□□ -0.95
DDX39B-218ENST00000478365 A0A1W2PQ45 241 aaPredicted RBP9.11□□□□□ -0.95
DDX39B-218ENST00000478365 A0A1W2PQY0 241 aa9.11□□□□□ -0.95
DDX39B-218ENST00000478365 OPLAHO14841 1288 aa9.11□□□□□ -0.95
DDX39B-218ENST00000478365 PRPF3O43395 683 aaKnown RBP9.11□□□□□ -0.95
DDX39B-218ENST00000478365 PGK1P00558 417 aa9.11□□□□□ -0.95
DDX39B-218ENST00000478365 GH1P01241 217 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms