RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 LLPHQ9BRT6 129 aaKnown RBP13.21□□□□□ -0.3
CBWD3-206ENST00000478048 ACAD9Q9H845 621 aa13.21□□□□□ -0.3
CBWD3-206ENST00000478048 ABCB11O95342 1321 aa13.21□□□□□ -0.3
CBWD3-206ENST00000478048 STK36Q9NRP7 1315 aa13.21□□□□□ -0.3
CBWD3-206ENST00000478048 COPB2P35606 906 aa13.2□□□□□ -0.3
CBWD3-206ENST00000478048 FCGRTP55899 365 aa13.2□□□□□ -0.3
CBWD3-206ENST00000478048 KIF22Q14807 665 aa13.2□□□□□ -0.3
CBWD3-206ENST00000478048 NSMFQ6X4W1 530 aa13.2□□□□□ -0.3
CBWD3-206ENST00000478048 ERO1AQ96HE7 468 aa13.2□□□□□ -0.3
CBWD3-206ENST00000478048 MMP19Q99542 508 aa13.2□□□□□ -0.3
CBWD3-206ENST00000478048 EPAS1Q99814 870 aa13.2□□□□□ -0.3
CBWD3-206ENST00000478048 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
CBWD3-206ENST00000478048 A1CFQ9NQ94 594 aaKnown RBP13.2□□□□□ -0.3
CBWD3-206ENST00000478048 GJB4Q9NTQ9 266 aa13.2□□□□□ -0.3
CBWD3-206ENST00000478048 BARHL2Q9NY43 387 aa13.2□□□□□ -0.3
CBWD3-206ENST00000478048 VPS54Q9P1Q0 977 aa13.2□□□□□ -0.3
CBWD3-206ENST00000478048 RBM27Q9P2N5 1060 aaKnown RBP13.2□□□□□ -0.3
CBWD3-206ENST00000478048 PNMA2Q9UL42 364 aa13.2□□□□□ -0.3
CBWD3-206ENST00000478048 GABRQQ9UN88 632 aa13.2□□□□□ -0.3
CBWD3-206ENST00000478048 MRPL11Q9Y3B7 192 aaKnown RBP13.2□□□□□ -0.3
CBWD3-206ENST00000478048 PGK2P07205 417 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 NAPAP54920 295 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 PURBQ96QR8 312 aaKnown RBP13.19□□□□□ -0.3
CBWD3-206ENST00000478048 TSHZ2Q9NRE2 1034 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 FBXO40Q9UH90 709 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 GJD2Q9UKL4 321 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 LCTP09848 1927 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 ADAMTS3O15072 1205 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 FCER1AP12319 257 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 ADORA2AP29274 412 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 GRB14Q14449 540 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 KCTD2Q14681 263 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 MORN1Q5T089 497 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 SLC30A10Q6XR72 485 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.19□□□□□ -0.3
CBWD3-206ENST00000478048 ANKRD35Q8N283 1001 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 ALG1Q9BT22 464 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 CYP39A1Q9NYL5 469 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 IVNS1ABPQ9Y6Y0 642 aa13.19□□□□□ -0.3
CBWD3-206ENST00000478048 STRNO43815 780 aa13.18□□□□□ -0.3
CBWD3-206ENST00000478048 COBLO75128 1261 aa13.18□□□□□ -0.3
CBWD3-206ENST00000478048 CFBP00751 764 aa13.18□□□□□ -0.3
CBWD3-206ENST00000478048 RPS6P62753 249 aaKnown RBP13.18□□□□□ -0.3
CBWD3-206ENST00000478048 PRKCZQ05513 592 aa13.18□□□□□ -0.3
CBWD3-206ENST00000478048 TRAF1Q13077 416 aa13.18□□□□□ -0.3
CBWD3-206ENST00000478048 BAATQ14032 418 aaPredicted RBP13.18□□□□□ -0.3
CBWD3-206ENST00000478048 OTOP1Q7RTM1 612 aa13.18□□□□□ -0.3
CBWD3-206ENST00000478048 RBBP6Q7Z6E9 1792 aaKnown RBP13.18□□□□□ -0.3
CBWD3-206ENST00000478048 SMCO2A6NFE2 343 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 SLC15A5A6NIM6 579 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 hCG_1984214I3L0E3 225 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 GJB2P29033 226 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 HOXA13P31271 388 aaPredicted RBP13.17□□□□□ -0.3
CBWD3-206ENST00000478048 FLT3LGP49771 235 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 HMGN5P82970 282 aaKnown RBP13.17□□□□□ -0.3
CBWD3-206ENST00000478048 CNTN2Q02246 1040 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 USP17L6PQ6QN14 398 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 RNF207Q6ZRF8 634 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 ABRAQ8N0Z2 381 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 ZNF713Q8N859 430 aaPredicted RBP13.17□□□□□ -0.3
CBWD3-206ENST00000478048 USP6NLQ92738 828 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 NUDT12Q9BQG2 462 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 COL20A1Q9P218 1284 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 KCNJ14Q9UNX9 436 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 TRIM17Q9Y577 477 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.17□□□□□ -0.3
CBWD3-206ENST00000478048 PLXNA1Q9UIW2 1896 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 ASTN1O14525 1302 aa13.17□□□□□ -0.3
CBWD3-206ENST00000478048 DNAJC25-GNG10A0A024R161 153 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 MEIS2O14770 477 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 CYP2B6P20813 491 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 COL9A1P20849 921 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 CALML3P27482 149 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 MAP2K5Q13163 448 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 UBE2SQ16763 222 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 PPP1R18Q6NYC8 613 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 MCF2L2Q86YR7 1114 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 SPRYD3Q8NCJ5 442 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 NPLOC4Q8TAT6 608 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 SYTL5Q8TDW5 730 aaPredicted RBP13.16□□□□□ -0.3
CBWD3-206ENST00000478048 WASF1Q92558 559 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 ZMYND12Q9H0C1 365 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 PSTPIP2Q9H939 334 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 SRRDQ9UH36 339 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 SMC3Q9UQE7 1217 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 ZNF236Q9UL36 1845 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 HTTP42858 3142 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 HSD17B4P51659 736 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 GUCY1B3Q02153 619 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 GHRHRQ02643 423 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 NPY5RQ15761 445 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 PROX2Q3B8N5 592 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 DPP9Q86TI2 863 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 LAPTM4BQ86VI4 370 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 FAM133AQ8N9E0 248 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 FAM184AQ8NB25 1140 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 RGS22Q8NE09 1264 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 SOCS4Q8WXH5 440 aa13.16□□□□□ -0.3
CBWD3-206ENST00000478048 INTS4Q96HW7 963 aaKnown RBP13.16□□□□□ -0.3
CBWD3-206ENST00000478048 FGD4Q96M96 766 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms