RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 NACA2Q9H009 215 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 PCMTD2Q9NV79 361 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 TUBGCP4Q9UGJ1 667 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 BAIAP2L1Q9UHR4 511 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 CFAP45Q9UL16 551 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 PAIP2BQ9ULR5 123 aaKnown RBP13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 ZNF532Q9HCE3 1301 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 A0A1B0GVL5 298 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 DNM1LO00429 736 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 PPP1R37O75864 691 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 FGAP02671 866 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 BCAMP50895 628 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 PSMC1P62191 440 aaKnown RBP13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 PDCLQ13371 301 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 C3orf67Q6ZVT6 689 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 APBB1IPQ7Z5R6 666 aaPredicted RBP13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 NME8Q8N427 588 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 NECAB1Q8N987 351 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 AIDAQ96BJ3 306 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 TRAPPC9Q96Q05 1148 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 PCDH18Q9HCL0 1135 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 MINPP1Q9UNW1 487 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 CASZ1Q86V15 1759 aa13.97□□□□□ -0.17
RTFDC1-207ENST00000477573 C4AP0C0L4 1744 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 TMEM232C9JQI7 657 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 ZNF213O14771 459 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 KRT38O76015 456 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 TMCC1O94876 653 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 TOP1P11387 765 aaKnown RBP13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 ALADP13716 330 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 PHEXP78562 749 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 CMPK2Q5EBM0 449 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 ALS2CLQ60I27 953 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 SYNE3Q6ZMZ3 975 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 CCDC73Q6ZRK6 1079 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 STOX1Q6ZVD7 989 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 VPS37DQ86XT2 251 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 MTA3Q9BTC8 594 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 SELENOOQ9BVL4 669 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 TRAIPQ9BWF2 469 aa13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 DMAP1Q9NPF5 467 aaPredicted RBP13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 LUC7LQ9NQ29 371 aaKnown RBP13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 BZW2Q9Y6E2 419 aaKnown RBP13.96□□□□□ -0.17
RTFDC1-207ENST00000477573 SNAP23O00161 211 aa13.96□□□□□ -0.18
RTFDC1-207ENST00000477573 CCND1P24385 295 aa13.96□□□□□ -0.18
RTFDC1-207ENST00000477573 TMEM62Q0P6H9 643 aa13.96□□□□□ -0.18
RTFDC1-207ENST00000477573 SEPT14Q6ZU15 432 aa13.96□□□□□ -0.18
RTFDC1-207ENST00000477573 CDC37L1Q7L3B6 337 aa13.96□□□□□ -0.18
RTFDC1-207ENST00000477573 OSBPL7Q9BZF2 842 aa13.96□□□□□ -0.18
RTFDC1-207ENST00000477573 LAMA4Q16363 1823 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 DOCK2Q92608 1830 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 TCRBV5S4A2TA0A5A2 114 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 DPPA5A6NC42 116 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 N4BP3O15049 544 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 SH3BGRP55822 239 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 BTG3Q14201 252 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 ZBTB8BQ8NAP8 495 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 CELF1Q92879 486 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 LRRC4BQ9NT99 713 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 WWC3Q9ULE0 1092 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 FAM184BQ9ULE4 1060 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 ZNF804BA4D1E1 1349 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 CFAP73A6NFT4 308 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 ABL2P42684 1182 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 NLRP5P59047 1200 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 EXOSC10Q01780 885 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 FAM160A1Q05DH4 1040 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 ADCY1Q08828 1119 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 ZNF772Q68DY9 489 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 RALYLQ86SE5 291 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 STAG2Q8N3U4 1231 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 FBXL16Q8N461 479 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 MAGEB6Q8N7X4 407 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 CNBD1Q8NA66 436 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 BRF1Q92994 677 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 AGXT2Q9BYV1 514 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 GPCPD1Q9NPB8 672 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 TUBA8Q9NY65 449 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 LRP2BPQ9P2M1 347 aa13.95□□□□□ -0.18
RTFDC1-207ENST00000477573 PALM3A6NDB9 673 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 OPLAHO14841 1288 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 SEMA3EO15041 775 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 GSTA1P08263 222 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 GNAT2P19087 354 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 APBA1Q02410 837 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 COL9A3Q14050 684 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 SEPT2Q15019 361 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 CLPPQ16740 277 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 TMEM110Q86TL2 294 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 AMIGO3Q86WK7 504 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 SLF2Q8IX21 1173 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 NOA1Q8NC60 698 aaKnown RBP13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 NCOA7Q8NI08 942 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 DYDC1Q8WWB3 177 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 BHMTQ93088 406 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 PPP2R3CQ969Q6 453 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 NAPGQ99747 312 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 TBC1D7Q9P0N9 293 aa13.94□□□□□ -0.18
RTFDC1-207ENST00000477573 DENND2AQ9ULE3 1009 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms