RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 FLT3LGP49771 235 aa17.56■□□□□ 0.4
SEC13-215ENST00000477547 CNTN2Q02246 1040 aa17.56■□□□□ 0.4
SEC13-215ENST00000477547 FCHSD1Q86WN1 690 aa17.56■□□□□ 0.4
SEC13-215ENST00000477547 FAM133AQ8N9E0 248 aa17.56■□□□□ 0.4
SEC13-215ENST00000477547 DAGLBQ8NCG7 672 aa17.56■□□□□ 0.4
SEC13-215ENST00000477547 SLC17A8Q8NDX2 589 aa17.56■□□□□ 0.4
SEC13-215ENST00000477547 BICD2Q8TD16 824 aa17.56■□□□□ 0.4
SEC13-215ENST00000477547 BRMS1Q9HCU9 246 aa17.56■□□□□ 0.4
SEC13-215ENST00000477547 SLC5A4Q9NY91 659 aa17.56■□□□□ 0.4
SEC13-215ENST00000477547 MAP3K20Q9NYL2 800 aaKnown RBP17.56■□□□□ 0.4
SEC13-215ENST00000477547 COL20A1Q9P218 1284 aa17.56■□□□□ 0.4
SEC13-215ENST00000477547 PCDHA4Q9UN74 947 aa17.56■□□□□ 0.4
SEC13-215ENST00000477547 FRMPD3Q5JV73 1810 aa17.56■□□□□ 0.4
SEC13-215ENST00000477547 RANBP2P49792 3224 aaKnown RBP17.56■□□□□ 0.4
SEC13-215ENST00000477547 COBLO75128 1261 aa17.55■□□□□ 0.4
SEC13-215ENST00000477547 MMP1P03956 469 aa17.55■□□□□ 0.4
SEC13-215ENST00000477547 CYP2B6P20813 491 aa17.55■□□□□ 0.4
SEC13-215ENST00000477547 NPY5RQ15761 445 aa17.55■□□□□ 0.4
SEC13-215ENST00000477547 GALNT17Q6IS24 598 aa17.55■□□□□ 0.4
SEC13-215ENST00000477547 TEX2Q8IWB9 1127 aa17.55■□□□□ 0.4
SEC13-215ENST00000477547 BLIDQ8IZY5 108 aa17.55■□□□□ 0.4
SEC13-215ENST00000477547 RASGRP4Q8TDF6 673 aa17.55■□□□□ 0.4
SEC13-215ENST00000477547 USP6NLQ92738 828 aa17.55■□□□□ 0.4
SEC13-215ENST00000477547 PURBQ96QR8 312 aaKnown RBP17.55■□□□□ 0.4
SEC13-215ENST00000477547 GJD2Q9UKL4 321 aa17.55■□□□□ 0.4
SEC13-215ENST00000477547 ASTN1O14525 1302 aa17.55■□□□□ 0.4
SEC13-215ENST00000477547 SPDYE3A6NKU9 549 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 H3BQV1 296 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 ADAMTS3O15072 1205 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 HOXC6P09630 235 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 PDCP20941 246 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 KRT2P35908 639 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 ALDH5A1P51649 535 aaPredicted RBP17.54■□□□□ 0.4
SEC13-215ENST00000477547 PRMT2P55345 433 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 AP3B2Q13367 1082 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 ZNF792Q3KQV3 632 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 FBXO18Q8NFZ0 1043 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 NPLOC4Q8TAT6 608 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 DPF3Q92784 378 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 PGBD1Q96JS3 809 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 FGD4Q96M96 766 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 TMEM260Q9NX78 707 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 BIN2Q9UBW5 565 aaPredicted RBP17.54■□□□□ 0.4
SEC13-215ENST00000477547 ADD3Q9UEY8 706 aaKnown RBP17.54■□□□□ 0.4
SEC13-215ENST00000477547 FRMPD4Q14CM0 1322 aa17.54■□□□□ 0.4
SEC13-215ENST00000477547 SOWAHBA6NEL2 793 aa17.53■□□□□ 0.4
SEC13-215ENST00000477547 CLK2P49760 499 aaKnown RBP17.53■□□□□ 0.4
SEC13-215ENST00000477547 SAFBQ15424 915 aaKnown RBP eCLIP17.53■□□□□ 0.46e-6■□□□□ 10.6
SEC13-215ENST00000477547 JAKMIP3Q5VZ66 844 aa17.53■□□□□ 0.4
SEC13-215ENST00000477547 DIS3L2Q8IYB7 885 aaKnown RBP17.53■□□□□ 0.4
SEC13-215ENST00000477547 RAET1EQ8TD07 263 aa17.53■□□□□ 0.4
SEC13-215ENST00000477547 MAML3Q96JK9 1138 aa17.53■□□□□ 0.4
SEC13-215ENST00000477547 TAAR1Q96RJ0 339 aa17.53■□□□□ 0.4
SEC13-215ENST00000477547 RMDN3Q96TC7 470 aa17.53■□□□□ 0.4
SEC13-215ENST00000477547 ANO3Q9BYT9 981 aa17.53■□□□□ 0.4
SEC13-215ENST00000477547 EHMT1Q9H9B1 1298 aa17.53■□□□□ 0.4
SEC13-215ENST00000477547 DOCK5Q9H7D0 1870 aa17.53■□□□□ 0.4
SEC13-215ENST00000477547 COL6A3P12111 3177 aa17.52■□□□□ 0.4
SEC13-215ENST00000477547 VPS37CA5D8V6 355 aaPredicted RBP17.52■□□□□ 0.4
SEC13-215ENST00000477547 EIF2AK2P19525 551 aaKnown RBP17.52■□□□□ 0.4
SEC13-215ENST00000477547 IRF5Q13568 498 aa17.52■□□□□ 0.4
SEC13-215ENST00000477547 MTFR1Q15390 333 aa17.52■□□□□ 0.4
SEC13-215ENST00000477547 LARP1BQ659C4 914 aaKnown RBP17.52■□□□□ 0.4
SEC13-215ENST00000477547 DNERQ8NFT8 737 aa17.52■□□□□ 0.4
SEC13-215ENST00000477547 OXER1Q8TDS5 423 aa17.52■□□□□ 0.4
SEC13-215ENST00000477547 PXMP2Q9NR77 195 aa17.52■□□□□ 0.4
SEC13-215ENST00000477547 DAXXQ9UER7 740 aaPredicted RBP17.52■□□□□ 0.4
SEC13-215ENST00000477547 DIS3Q9Y2L1 958 aaKnown RBP17.52■□□□□ 0.4
SEC13-215ENST00000477547 RPTORQ8N122 1335 aa17.52■□□□□ 0.4
SEC13-215ENST00000477547 FOSP01100 380 aaPredicted RBP17.51■□□□□ 0.39
SEC13-215ENST00000477547 XRCC5P13010 732 aaKnown RBP17.51■□□□□ 0.39
SEC13-215ENST00000477547 UBXN2AP68543 259 aa17.51■□□□□ 0.39
SEC13-215ENST00000477547 NR5A1Q13285 461 aa17.51■□□□□ 0.39
SEC13-215ENST00000477547 GNL2Q13823 731 aaKnown RBP17.51■□□□□ 0.39
SEC13-215ENST00000477547 CCL14Q16627 93 aa17.51■□□□□ 0.39
SEC13-215ENST00000477547 ARHGEF16Q5VV41 709 aa17.51■□□□□ 0.39
SEC13-215ENST00000477547 MCTP2Q6DN12 878 aa17.51■□□□□ 0.39
SEC13-215ENST00000477547 ZNF467Q7Z7K2 595 aaPredicted RBP17.51■□□□□ 0.39
SEC13-215ENST00000477547 NSUN6Q8TEA1 469 aaKnown RBP17.51■□□□□ 0.39
SEC13-215ENST00000477547 TRIB2Q92519 343 aa17.51■□□□□ 0.39
SEC13-215ENST00000477547 MPHOSPH6Q99547 160 aaKnown RBP17.51■□□□□ 0.39
SEC13-215ENST00000477547 PCDHA6Q9UN73 950 aa17.51■□□□□ 0.39
SEC13-215ENST00000477547 PCDHA8Q9Y5H6 950 aa17.51■□□□□ 0.39
SEC13-215ENST00000477547 CCDC194A0A1B0GVG4 234 aa17.5■□□□□ 0.39
SEC13-215ENST00000477547 M0R2N6 131 aa17.5■□□□□ 0.39
SEC13-215ENST00000477547 SYT1P21579 422 aa17.5■□□□□ 0.39
SEC13-215ENST00000477547 KRT25Q7Z3Z0 450 aa17.5■□□□□ 0.39
SEC13-215ENST00000477547 IL31RAQ8NI17 732 aa17.5■□□□□ 0.39
SEC13-215ENST00000477547 PDCD2LQ9BRP1 358 aa17.5■□□□□ 0.39
SEC13-215ENST00000477547 FLRT1Q9NZU1 646 aa17.5■□□□□ 0.39
SEC13-215ENST00000477547 A0A0C4DFX4 3053 aa17.5■□□□□ 0.39
SEC13-215ENST00000477547 LOC102724159A0A0B4J2E5 919 aa17.49■□□□□ 0.39
SEC13-215ENST00000477547 ASB14A6NK59 587 aa17.49■□□□□ 0.39
SEC13-215ENST00000477547 BTBD18B2RXH4 712 aa17.49■□□□□ 0.39
SEC13-215ENST00000477547 ADCY3O60266 1144 aa17.49■□□□□ 0.39
SEC13-215ENST00000477547 ELNP15502 786 aa17.49■□□□□ 0.39
SEC13-215ENST00000477547 PGM5Q15124 567 aa17.49■□□□□ 0.39
SEC13-215ENST00000477547 PWP2Q15269 919 aaKnown RBP17.49■□□□□ 0.39
SEC13-215ENST00000477547 OLFML2BQ68BL8 750 aa17.49■□□□□ 0.39
SEC13-215ENST00000477547 MCTP1Q6DN14 999 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms