RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 TRIM32Q13049 653 aa15.09■□□□□ 0.01
TOP3A-205ENST00000477508 MTFR1Q15390 333 aa15.09■□□□□ 0.01
TOP3A-205ENST00000477508 PKN1Q16512 942 aa15.09■□□□□ 0.01
TOP3A-205ENST00000477508 ARHGEF16Q5VV41 709 aa15.09■□□□□ 0.01
TOP3A-205ENST00000477508 CCDC148Q8NFR7 591 aa15.09■□□□□ 0.01
TOP3A-205ENST00000477508 SMARCC2Q8TAQ2 1214 aa15.09■□□□□ 0.01
TOP3A-205ENST00000477508 WASF1Q92558 559 aa15.09■□□□□ 0.01
TOP3A-205ENST00000477508 GPKOWQ92917 476 aaPredicted RBP eCLIP15.09■□□□□ 0.01
TOP3A-205ENST00000477508 UNC93B1Q9H1C4 597 aa15.09■□□□□ 0.01
TOP3A-205ENST00000477508 RIC8AQ9NPQ8 531 aa15.09■□□□□ 0.01
TOP3A-205ENST00000477508 SMCO2A6NFE2 343 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 SEPT4O43236 478 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 XBP1P17861 261 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 EDNRBP24530 442 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 GNA11P29992 359 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 ADCY7P51828 1080 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 ACVR2BQ13705 512 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 NECAB1Q8N987 351 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 BICD2Q8TD16 824 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 TAAR1Q96RJ0 339 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 LLPHQ9BRT6 129 aaKnown RBP15.08■□□□□ 0
TOP3A-205ENST00000477508 EHMT1Q9H9B1 1298 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 C6orf50Q9HD87 102 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 VTA1Q9NP79 307 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 PXMP2Q9NR77 195 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 COL20A1Q9P218 1284 aa15.08■□□□□ 0
TOP3A-205ENST00000477508 SPDYE3A6NKU9 549 aa15.07■□□□□ 0
TOP3A-205ENST00000477508 MEIS2O14770 477 aa15.07■□□□□ 0
TOP3A-205ENST00000477508 SGPL1O95470 568 aa15.07■□□□□ 0
TOP3A-205ENST00000477508 FOSP01100 380 aaPredicted RBP15.07■□□□□ 0
TOP3A-205ENST00000477508 MYCP01106 439 aaPredicted RBP15.07■□□□□ 0
TOP3A-205ENST00000477508 CNGA1P29973 690 aa15.07■□□□□ 0
TOP3A-205ENST00000477508 CCND3P30281 292 aaPredicted RBP15.07■□□□□ 0
TOP3A-205ENST00000477508 HOXA13P31271 388 aaPredicted RBP15.07■□□□□ 0
TOP3A-205ENST00000477508 GJA8P48165 433 aa15.07■□□□□ 0
TOP3A-205ENST00000477508 STXBP2Q15833 593 aa15.07■□□□□ 0
TOP3A-205ENST00000477508 GALNT17Q6IS24 598 aa15.07■□□□□ 0
TOP3A-205ENST00000477508 XRRA1Q6P2D8 792 aa15.07■□□□□ 0
TOP3A-205ENST00000477508 FCHSD1Q86WN1 690 aa15.07■□□□□ 0
TOP3A-205ENST00000477508 PURBQ96QR8 312 aaKnown RBP15.07■□□□□ 0
TOP3A-205ENST00000477508 ZMYND12Q9H0C1 365 aa15.07■□□□□ 0
TOP3A-205ENST00000477508 RTN4Q9NQC3 1192 aaKnown RBP15.07■□□□□ 0
TOP3A-205ENST00000477508 DDX20Q9UHI6 824 aaKnown RBP15.07■□□□□ 0
TOP3A-205ENST00000477508 FAM184BQ9ULE4 1060 aa15.07■□□□□ 0
TOP3A-205ENST00000477508 ASTN1O14525 1302 aa15.07■□□□□ 0
TOP3A-205ENST00000477508 LCTP09848 1927 aa15.06■□□□□ 0
TOP3A-205ENST00000477508 MCM3APO60318 1980 aa15.06■□□□□ 0
TOP3A-205ENST00000477508 EIF3JO75822 258 aaKnown RBP15.06■□□□□ 0
TOP3A-205ENST00000477508 STAM2O75886 525 aa15.06■□□□□ 0
TOP3A-205ENST00000477508 LARGE1O95461 756 aa15.06■□□□□ 0
TOP3A-205ENST00000477508 ZNF865P0CJ78 1059 aaPredicted RBP15.06■□□□□ 0
TOP3A-205ENST00000477508 AKR1A1P14550 325 aa15.06■□□□□ 0
TOP3A-205ENST00000477508 PRAMEF19Q5SWL8 479 aa15.06■□□□□ 0
TOP3A-205ENST00000477508 IQSEC1Q6DN90 963 aa15.06■□□□□ 0
TOP3A-205ENST00000477508 USP17L6PQ6QN14 398 aa15.06■□□□□ 0
TOP3A-205ENST00000477508 TRPV1Q8NER1 839 aa15.06■□□□□ 0
TOP3A-205ENST00000477508 U2AF1L4Q8WU68 220 aaKnown RBP15.06■□□□□ 0
TOP3A-205ENST00000477508 DEFB118Q96PH6 123 aa15.06■□□□□ 0
TOP3A-205ENST00000477508 ORC3Q9UBD5 711 aaPredicted RBP15.06■□□□□ 0
TOP3A-205ENST00000477508 ZHX1Q9UKY1 873 aaPredicted RBP15.06■□□□□ 0
TOP3A-205ENST00000477508 CTDNEP1O95476 244 aa15.05■□□□□ -0
TOP3A-205ENST00000477508 NR3C2P08235 984 aa15.05■□□□□ -0
TOP3A-205ENST00000477508 RARBP10826 455 aa15.05■□□□□ -0
TOP3A-205ENST00000477508 EIF2AK2P19525 551 aaKnown RBP15.05■□□□□ -0
TOP3A-205ENST00000477508 CCND2P30279 289 aa15.05■□□□□ -0
TOP3A-205ENST00000477508 HMGN5P82970 282 aaKnown RBP15.05■□□□□ -0
TOP3A-205ENST00000477508 AP3B2Q13367 1082 aa15.05■□□□□ -0
TOP3A-205ENST00000477508 TYW1BQ6NUM6 668 aa15.05■□□□□ -0
TOP3A-205ENST00000477508 NSUN7Q8NE18 718 aaKnown RBP15.05■□□□□ -0
TOP3A-205ENST00000477508 PDCD2LQ9BRP1 358 aa15.05■□□□□ -0
TOP3A-205ENST00000477508 KATNBL1Q9H079 304 aa15.05■□□□□ -0
TOP3A-205ENST00000477508 CRISPLD2Q9H0B8 497 aa15.05■□□□□ -0
TOP3A-205ENST00000477508 FRMPD4Q14CM0 1322 aa15.05■□□□□ -0
TOP3A-205ENST00000477508 TFRCP02786 760 aaKnown RBP15.04■□□□□ -0
TOP3A-205ENST00000477508 NLRP5P59047 1200 aa15.04■□□□□ -0
TOP3A-205ENST00000477508 CCDC144BQ3MJ40 725 aa15.04■□□□□ -0
TOP3A-205ENST00000477508 LHX8Q68G74 356 aa15.04■□□□□ -0
TOP3A-205ENST00000477508 VSIG10LQ86VR7 867 aa15.04■□□□□ -0
TOP3A-205ENST00000477508 CCDC83Q8IWF9 413 aa15.04■□□□□ -0
TOP3A-205ENST00000477508 REXO1Q8N1G1 1221 aaKnown RBP15.04■□□□□ -0
TOP3A-205ENST00000477508 ANKLE1Q8NAG6 615 aa15.04■□□□□ -0
TOP3A-205ENST00000477508 SCFD2Q8WU76 684 aa15.04■□□□□ -0
TOP3A-205ENST00000477508 VPS54Q9P1Q0 977 aa15.04■□□□□ -0
TOP3A-205ENST00000477508 OGDHLQ9ULD0 1010 aa15.04■□□□□ -0
TOP3A-205ENST00000477508 KIF3AQ9Y496 699 aa15.04■□□□□ -0
TOP3A-205ENST00000477508 RBM47A0AV96 593 aaKnown RBP15.03■□□□□ -0
TOP3A-205ENST00000477508 PPFIA3O75145 1194 aa15.03■□□□□ -0
TOP3A-205ENST00000477508 DUSP11O75319 330 aaKnown RBP15.03■□□□□ -0
TOP3A-205ENST00000477508 CLK2P49760 499 aaKnown RBP15.03■□□□□ -0
TOP3A-205ENST00000477508 TNFAIP2Q03169 654 aa15.03■□□□□ -0
TOP3A-205ENST00000477508 PGM5Q15124 567 aa15.03■□□□□ -0
TOP3A-205ENST00000477508 UBE2SQ16763 222 aa15.03■□□□□ -0
TOP3A-205ENST00000477508 TAPT1Q6NXT6 567 aa15.03■□□□□ -0
TOP3A-205ENST00000477508 KCNV1Q6PIU1 500 aa15.03■□□□□ -0
TOP3A-205ENST00000477508 ARRDC4Q8NCT1 418 aa15.03■□□□□ -0
TOP3A-205ENST00000477508 TMX3Q96JJ7 454 aa15.03■□□□□ -0
TOP3A-205ENST00000477508 SPC25Q9HBM1 224 aa15.03■□□□□ -0
TOP3A-205ENST00000477508 PCDHA6Q9UN73 950 aa15.03■□□□□ -0
TOP3A-205ENST00000477508 PCDHA8Q9Y5H6 950 aa15.03■□□□□ -0
TOP3A-205ENST00000477508 POTEFA5A3E0 1075 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms