RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 MUC3AQ02505 3323 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 MICAL3Q7RTP6 2002 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 FAM86C2PA6NEL3 165 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 PLA2G6O60733 806 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 TXNP10599 105 aaKnown RBP7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 TAP1Q03518 808 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 BFSP2Q13515 415 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 PTGISQ16647 500 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 TMEM31Q5JXX7 168 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 FAM117BQ6P1L5 589 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 CHST3Q7LGC8 479 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 TMCO2Q7Z6W1 182 aaPredicted RBP7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 HERC6Q8IVU3 1022 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 CCDC155Q8N6L0 562 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 GDPD5Q8WTR4 605 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 SCFD2Q8WU76 684 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 DCAF4Q8WV16 495 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 COPS5Q92905 334 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 RANBP17Q9H2T7 1088 aaKnown RBP7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 EPHX3Q9H6B9 360 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 IL17RBQ9NRM6 502 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 COG5Q9UP83 839 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 CHD7Q9P2D1 2997 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 DOCK5Q9H7D0 1870 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 LAMA4Q16363 1823 aa7.87□□□□□ -1.15
RTFDC1-206ENST00000477485 TTC41PQ6P2S7 1318 aa7.86□□□□□ -1.15
RTFDC1-206ENST00000477485 B4DLN1 442 aa7.86□□□□□ -1.15
RTFDC1-206ENST00000477485 ARHGEF15O94989 841 aa7.86□□□□□ -1.15
RTFDC1-206ENST00000477485 IQCF3P0C7M6 154 aa7.86□□□□□ -1.15
RTFDC1-206ENST00000477485 MRPL12P52815 198 aaKnown RBP7.86□□□□□ -1.15
RTFDC1-206ENST00000477485 GRB10Q13322 594 aa7.86□□□□□ -1.15
RTFDC1-206ENST00000477485 MKRN4PQ13434 485 aaPredicted RBP7.86□□□□□ -1.15
RTFDC1-206ENST00000477485 ZMYM1Q5SVZ6 1142 aa7.86□□□□□ -1.15
RTFDC1-206ENST00000477485 SPRED2Q7Z698 418 aa7.86□□□□□ -1.15
RTFDC1-206ENST00000477485 PHOSPHO2Q8TCD6 241 aa7.86□□□□□ -1.15
RTFDC1-206ENST00000477485 ALG1Q9BT22 464 aa7.86□□□□□ -1.15
RTFDC1-206ENST00000477485 LRFN3Q9BTN0 628 aa7.86□□□□□ -1.15
RTFDC1-206ENST00000477485 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.86□□□□□ -1.15
RTFDC1-206ENST00000477485 LCHNA4D1U4 455 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 PITPNM1O00562 1244 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 NKRFO15226 690 aaKnown RBP eCLIP7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 DHX16O60231 1041 aaKnown RBP7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 KPNA6O60684 536 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 BAIAP3O94812 1187 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 TOP1P11387 765 aaKnown RBP7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 SSTR3P32745 418 aaPredicted RBP7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 HAND2P61296 217 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 WDR5P61964 334 aaKnown RBP7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 RPS6P62753 249 aaKnown RBP7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 VPS53Q5VIR6 699 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 NFRKBQ6P4R8 1299 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 EP400NLQ6ZTU2 488 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 SEPT14Q6ZU15 432 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 LRRC8DQ7L1W4 858 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 OTUD7AQ8TE49 926 aaPredicted RBP7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 MORC4Q8TE76 937 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 VWCEQ96DN2 955 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 UIMC1Q96RL1 719 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 TMEM47Q9BQJ4 181 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 DCTPP1Q9H773 170 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 KAT6AQ92794 2004 aa7.85□□□□□ -1.15
RTFDC1-206ENST00000477485 RALGAPA2Q2PPJ7 1873 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 RBM47A0AV96 593 aaKnown RBP7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 SORBS3O60504 671 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 ARIH2O95376 493 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 MMP3P08254 477 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 GOLGA8HP0CJ92 632 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 MX1P20591 662 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 DEFB103AP81534 67 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 PTPN11Q06124 597 aaPredicted RBP7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 LY6KQ17RY6 165 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 DIEXFQ68CQ4 756 aaKnown RBP7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 GDF6Q6KF10 455 aaPredicted RBP7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 C7orf31Q8N865 590 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 CAGE1Q8TC20 777 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 PI4K2BQ8TCG2 481 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 AFAP1L1Q8TED9 768 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 AFG1LQ8WV93 481 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 ZKSCAN3Q9BRR0 538 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 BRWD1Q9NSI6 2320 aa7.84□□□□□ -1.15
RTFDC1-206ENST00000477485 ATG2AQ2TAZ0 1938 aa7.84□□□□□ -1.16
RTFDC1-206ENST00000477485 XIRP2A4UGR9 3374 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 LOC102724159A0A0B4J2E5 919 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 A6NJR5 290 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 RBAK-RBAKDNI3L0D1 243 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 ORC4O43929 436 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 GH1P01241 217 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 ZNF286BP0CG31 522 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 PDHBP11177 359 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 SELPP16109 830 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 POU3F3P20264 500 aaPredicted RBP7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 CASTP20810 708 aaKnown RBP7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 KCNA5P22460 613 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 PWP2Q15269 919 aaKnown RBP7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 CSPP1Q1MSJ5 1256 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 CNKSR3Q6P9H4 555 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 BTNL9Q6UXG8 535 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 DHX37Q8IY37 1157 aaKnown RBP7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 DNERQ8NFT8 737 aa7.83□□□□□ -1.16
RTFDC1-206ENST00000477485 CLEC4DQ8WXI8 215 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms