RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 GJC2Q5T442 439 aaPredicted RBP18.71■□□□□ 0.59
SRM-204ENST00000475189 ARHGEF16Q5VV41 709 aa18.71■□□□□ 0.59
SRM-204ENST00000475189 WWC2Q6AWC2 1192 aa18.71■□□□□ 0.59
SRM-204ENST00000475189 HEATR3Q7Z4Q2 680 aa18.71■□□□□ 0.59
SRM-204ENST00000475189 IWS1Q96ST2 819 aa18.71■□□□□ 0.59
SRM-204ENST00000475189 PXMP2Q9NR77 195 aa18.71■□□□□ 0.59
SRM-204ENST00000475189 RBM47A0AV96 593 aaKnown RBP18.7■□□□□ 0.58
SRM-204ENST00000475189 MEIS2O14770 477 aa18.7■□□□□ 0.58
SRM-204ENST00000475189 ADAMTS4O75173 837 aa18.7■□□□□ 0.58
SRM-204ENST00000475189 PGK1P00558 417 aa18.7■□□□□ 0.58
SRM-204ENST00000475189 COL6A1P12109 1028 aa18.7■□□□□ 0.58
SRM-204ENST00000475189 AK2P54819 239 aa18.7■□□□□ 0.58
SRM-204ENST00000475189 TNFAIP2Q03169 654 aa18.7■□□□□ 0.58
SRM-204ENST00000475189 IQSEC1Q6DN90 963 aa18.7■□□□□ 0.58
SRM-204ENST00000475189 FCHSD1Q86WN1 690 aa18.7■□□□□ 0.58
SRM-204ENST00000475189 C11orf49Q9H6J7 331 aa18.7■□□□□ 0.58
SRM-204ENST00000475189 SYNRGQ9UMZ2 1314 aa18.7■□□□□ 0.58
SRM-204ENST00000475189 PIK3CDO00329 1044 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 DNM1LO00429 736 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 PRPF3O43395 683 aaKnown RBP18.69■□□□□ 0.58
SRM-204ENST00000475189 NR3C2P08235 984 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 IFNAR1P17181 557 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 SMPD1P17405 629 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 NEK4P51957 841 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 STK3Q13188 491 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 TMEM63BQ5T3F8 832 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 TYW1BQ6NUM6 668 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 USP17L6PQ6QN14 398 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 PHKBQ93100 1093 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 PDCD2LQ9BRP1 358 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 C22orf23Q9BZE7 217 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 UPF3AQ9H1J1 476 aaKnown RBP18.69■□□□□ 0.58
SRM-204ENST00000475189 PSTPIP2Q9H939 334 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 TPCN1Q9ULQ1 816 aa18.69■□□□□ 0.58
SRM-204ENST00000475189 GNEQ9Y223 722 aaKnown RBP18.69■□□□□ 0.58
SRM-204ENST00000475189 KBTBD13C9JR72 458 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 hCG_1984214I3L0E3 225 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 STXBP3O00186 592 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 MYCNP04198 464 aaPredicted RBP18.68■□□□□ 0.58
SRM-204ENST00000475189 GJA9P57773 515 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 IRX5P78411 483 aaPredicted RBP18.68■□□□□ 0.58
SRM-204ENST00000475189 PGM5Q15124 567 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 ANKRD1Q15327 319 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 STXBP2Q15833 593 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 PKN1Q16512 942 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 PFKFB3Q16875 520 aaPredicted RBP18.68■□□□□ 0.58
SRM-204ENST00000475189 RNF180Q86T96 592 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 ZNF713Q8N859 430 aaPredicted RBP18.68■□□□□ 0.58
SRM-204ENST00000475189 KLHDC9Q8NEP7 349 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 CUL5Q93034 780 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 KIF2CQ99661 725 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 HTATIP2Q9BUP3 242 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 WDR11Q9BZH6 1224 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 BARHL2Q9NY43 387 aa18.68■□□□□ 0.58
SRM-204ENST00000475189 PPFIA3O75145 1194 aa18.67■□□□□ 0.58
SRM-204ENST00000475189 SCG2P13521 617 aa18.67■□□□□ 0.58
SRM-204ENST00000475189 PTGS1P23219 599 aa18.67■□□□□ 0.58
SRM-204ENST00000475189 RBM25P49756 843 aaKnown RBP18.67■□□□□ 0.58
SRM-204ENST00000475189 NAPAP54920 295 aa18.67■□□□□ 0.58
SRM-204ENST00000475189 PPP1R18Q6NYC8 613 aa18.67■□□□□ 0.58
SRM-204ENST00000475189 NOL8Q76FK4 1167 aaKnown RBP18.67■□□□□ 0.58
SRM-204ENST00000475189 IL31RAQ8NI17 732 aa18.67■□□□□ 0.58
SRM-204ENST00000475189 SMARCC2Q8TAQ2 1214 aa18.67■□□□□ 0.58
SRM-204ENST00000475189 RNF26Q9BY78 433 aaPredicted RBP18.67■□□□□ 0.58
SRM-204ENST00000475189 RBM27Q9P2N5 1060 aaKnown RBP18.67■□□□□ 0.58
SRM-204ENST00000475189 FRMPD4Q14CM0 1322 aa18.67■□□□□ 0.58
SRM-204ENST00000475189 MYH7BA7E2Y1 1941 aa18.66■□□□□ 0.58
SRM-204ENST00000475189 MYADML2A6NDP7 307 aa18.66■□□□□ 0.58
SRM-204ENST00000475189 CTAGE5O15320 804 aa18.66■□□□□ 0.58
SRM-204ENST00000475189 PFKFB2O60825 505 aa18.66■□□□□ 0.58
SRM-204ENST00000475189 EIF3JO75822 258 aaKnown RBP18.66■□□□□ 0.58
SRM-204ENST00000475189 MYCLP12524 364 aaPredicted RBP18.66■□□□□ 0.58
SRM-204ENST00000475189 NKX3-2P78367 333 aa18.66■□□□□ 0.58
SRM-204ENST00000475189 DUSP28Q4G0W2 176 aa18.66■□□□□ 0.58
SRM-204ENST00000475189 CCSAPQ6IQ19 270 aaPredicted RBP18.66■□□□□ 0.58
SRM-204ENST00000475189 VSIG10LQ86VR7 867 aa18.66■□□□□ 0.58
SRM-204ENST00000475189 SCFD2Q8WU76 684 aa18.66■□□□□ 0.58
SRM-204ENST00000475189 SLC26A6Q9BXS9 759 aa18.66■□□□□ 0.58
SRM-204ENST00000475189 SENP6Q9GZR1 1112 aaPredicted RBP18.66■□□□□ 0.58
SRM-204ENST00000475189 Q9Y3F1 56 aa18.66■□□□□ 0.58
SRM-204ENST00000475189 DYNC1LI2O43237 492 aaPredicted RBP18.65■□□□□ 0.58
SRM-204ENST00000475189 C6orf222P0C671 652 aaPredicted RBP18.65■□□□□ 0.58
SRM-204ENST00000475189 CST5P28325 142 aaPredicted RBP18.65■□□□□ 0.58
SRM-204ENST00000475189 AKAP17AQ02040 695 aaKnown RBP18.65■□□□□ 0.58
SRM-204ENST00000475189 SCRN1Q12765 414 aa18.65■□□□□ 0.58
SRM-204ENST00000475189 UBE2SQ16763 222 aa18.65■□□□□ 0.58
SRM-204ENST00000475189 TLK2Q86UE8 772 aa18.65■□□□□ 0.58
SRM-204ENST00000475189 TSEN34Q9BSV6 310 aaKnown RBP18.65■□□□□ 0.58
SRM-204ENST00000475189 SLKQ9H2G2 1235 aaPredicted RBP18.65■□□□□ 0.58
SRM-204ENST00000475189 SPC25Q9HBM1 224 aa18.65■□□□□ 0.58
SRM-204ENST00000475189 RIC8AQ9NPQ8 531 aa18.65■□□□□ 0.58
SRM-204ENST00000475189 PHF24Q9UPV7 400 aa18.65■□□□□ 0.58
SRM-204ENST00000475189 SMCO2A6NFE2 343 aa18.64■□□□□ 0.57
SRM-204ENST00000475189 CPLX1O14810 134 aa18.64■□□□□ 0.57
SRM-204ENST00000475189 RGS20O76081 388 aa18.64■□□□□ 0.57
SRM-204ENST00000475189 ARIH2O95376 493 aa18.64■□□□□ 0.57
SRM-204ENST00000475189 CCND2P30279 289 aa18.64■□□□□ 0.57
SRM-204ENST00000475189 SSRP1Q08945 709 aaKnown RBP18.64■□□□□ 0.57
SRM-204ENST00000475189 KCNA10Q16322 511 aa18.64■□□□□ 0.57
SRM-204ENST00000475189 CCDC62Q6P9F0 684 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms