RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 COPS5Q92905 334 aa16.46■□□□□ 0.23
CCDC78-209ENST00000474647 FAM227BQ96M60 508 aa16.46■□□□□ 0.23
CCDC78-209ENST00000474647 NECAB3Q96P71 396 aaPredicted RBP16.46■□□□□ 0.23
CCDC78-209ENST00000474647 FTOQ9C0B1 505 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCDC78-209ENST00000474647 HELLSQ9NRZ9 838 aa16.46■□□□□ 0.23
CCDC78-209ENST00000474647 RAPGEFL1Q9UHV5 662 aa16.46■□□□□ 0.23
CCDC78-209ENST00000474647 NOD1Q9Y239 953 aa16.46■□□□□ 0.23
CCDC78-209ENST00000474647 A0A0D9SFI3 127 aa16.45■□□□□ 0.22
CCDC78-209ENST00000474647 GTPBP6O43824 516 aaPredicted RBP16.45■□□□□ 0.22
CCDC78-209ENST00000474647 FGAP02671 866 aa16.45■□□□□ 0.22
CCDC78-209ENST00000474647 RPS6P62753 249 aaKnown RBP16.45■□□□□ 0.22
CCDC78-209ENST00000474647 ANKRD45Q5TZF3 282 aa16.45■□□□□ 0.22
CCDC78-209ENST00000474647 RETREG2Q8NC44 543 aa16.45■□□□□ 0.22
CCDC78-209ENST00000474647 SCFD2Q8WU76 684 aa16.45■□□□□ 0.22
CCDC78-209ENST00000474647 SLC9A7Q96T83 725 aa16.45■□□□□ 0.22
CCDC78-209ENST00000474647 NKRFO15226 690 aaKnown RBP eCLIP16.44■□□□□ 0.22
CCDC78-209ENST00000474647 FGRP09769 529 aa16.44■□□□□ 0.22
CCDC78-209ENST00000474647 TXNP10599 105 aaKnown RBP16.44■□□□□ 0.22
CCDC78-209ENST00000474647 RFC2P35250 354 aa16.44■□□□□ 0.22
CCDC78-209ENST00000474647 ZNF543Q08ER8 600 aa16.44■□□□□ 0.22
CCDC78-209ENST00000474647 ALX1Q15699 326 aa16.44■□□□□ 0.22
CCDC78-209ENST00000474647 MCMDC2Q4G0Z9 681 aa16.44■□□□□ 0.22
CCDC78-209ENST00000474647 NFRKBQ6P4R8 1299 aa16.44■□□□□ 0.22
CCDC78-209ENST00000474647 PNMA2Q9UL42 364 aa16.44■□□□□ 0.22
CCDC78-209ENST00000474647 PITPNM1O00562 1244 aa16.43■□□□□ 0.22
CCDC78-209ENST00000474647 IQCF3P0C7M6 154 aa16.43■□□□□ 0.22
CCDC78-209ENST00000474647 GOLGA8HP0CJ92 632 aa16.43■□□□□ 0.22
CCDC78-209ENST00000474647 KCNQ1P51787 676 aa16.43■□□□□ 0.22
CCDC78-209ENST00000474647 BFSP2Q13515 415 aa16.43■□□□□ 0.22
CCDC78-209ENST00000474647 MFSD6Q6ZSS7 791 aa16.43■□□□□ 0.22
CCDC78-209ENST00000474647 DNERQ8NFT8 737 aa16.43■□□□□ 0.22
CCDC78-209ENST00000474647 ARNTL2Q8WYA1 636 aa16.43■□□□□ 0.22
CCDC78-209ENST00000474647 ZKSCAN3Q9BRR0 538 aa16.43■□□□□ 0.22
CCDC78-209ENST00000474647 TCP11L1Q9NUJ3 509 aa16.43■□□□□ 0.22
CCDC78-209ENST00000474647 KAT6AQ92794 2004 aa16.43■□□□□ 0.22
CCDC78-209ENST00000474647 WDR19Q8NEZ3 1342 aa16.43■□□□□ 0.22
CCDC78-209ENST00000474647 EPOPA6NHQ4 379 aa16.42■□□□□ 0.22
CCDC78-209ENST00000474647 A6NJR5 290 aa16.42■□□□□ 0.22
CCDC78-209ENST00000474647 B4DLN1 442 aa16.42■□□□□ 0.22
CCDC78-209ENST00000474647 KPNA6O60684 536 aa16.42■□□□□ 0.22
CCDC78-209ENST00000474647 ARIH2O95376 493 aa16.42■□□□□ 0.22
CCDC78-209ENST00000474647 HSPD1P10809 573 aaKnown RBP16.42■□□□□ 0.22
CCDC78-209ENST00000474647 EDNRBP24530 442 aa16.42■□□□□ 0.22
CCDC78-209ENST00000474647 MRPL12P52815 198 aaKnown RBP16.42■□□□□ 0.22
CCDC78-209ENST00000474647 NMIQ13287 307 aaPredicted RBP16.42■□□□□ 0.22
CCDC78-209ENST00000474647 AAK1Q2M2I8 961 aa16.42■□□□□ 0.22
CCDC78-209ENST00000474647 KRT40Q6A162 431 aa16.42■□□□□ 0.22
CCDC78-209ENST00000474647 ZNF589Q86UQ0 364 aaPredicted RBP16.42■□□□□ 0.22
CCDC78-209ENST00000474647 CPVLQ9H3G5 476 aa16.42■□□□□ 0.22
CCDC78-209ENST00000474647 MTCH2Q9Y6C9 303 aa16.42■□□□□ 0.22
CCDC78-209ENST00000474647 BRWD1Q9NSI6 2320 aa16.42■□□□□ 0.22
CCDC78-209ENST00000474647 ZMYM6O95789 1325 aa16.42■□□□□ 0.22
CCDC78-209ENST00000474647 TRIM6-TRIM34B2RNG4 842 aa16.41■□□□□ 0.22
CCDC78-209ENST00000474647 PDE1AP54750 535 aa16.41■□□□□ 0.22
CCDC78-209ENST00000474647 PTPN11Q06124 597 aaPredicted RBP16.41■□□□□ 0.22
CCDC78-209ENST00000474647 PTGISQ16647 500 aa16.41■□□□□ 0.22
CCDC78-209ENST00000474647 CHST3Q7LGC8 479 aa16.41■□□□□ 0.22
CCDC78-209ENST00000474647 TBC1D10CQ8IV04 446 aa16.41■□□□□ 0.22
CCDC78-209ENST00000474647 HERC6Q8IVU3 1022 aa16.41■□□□□ 0.22
CCDC78-209ENST00000474647 CCDC155Q8N6L0 562 aa16.41■□□□□ 0.22
CCDC78-209ENST00000474647 NEDD4P46934 1319 aa16.41■□□□□ 0.22
CCDC78-209ENST00000474647 CCDC171Q6TFL3 1326 aa16.41■□□□□ 0.22
CCDC78-209ENST00000474647 BAZ2BQ9UIF8 2168 aaKnown RBP16.4■□□□□ 0.22
CCDC78-209ENST00000474647 KIF28PB7ZC32 967 aa16.4■□□□□ 0.22
CCDC78-209ENST00000474647 ARHGEF15O94989 841 aa16.4■□□□□ 0.22
CCDC78-209ENST00000474647 KCNJ6P48051 423 aa16.4■□□□□ 0.22
CCDC78-209ENST00000474647 TAP1Q03518 808 aa16.4■□□□□ 0.22
CCDC78-209ENST00000474647 CDC37Q16543 378 aaPredicted RBP16.4■□□□□ 0.22
CCDC78-209ENST00000474647 SEPT14Q6ZU15 432 aa16.4■□□□□ 0.22
CCDC78-209ENST00000474647 PHOSPHO2Q8TCD6 241 aa16.4■□□□□ 0.22
CCDC78-209ENST00000474647 RILPL2Q969X0 211 aa16.4■□□□□ 0.22
CCDC78-209ENST00000474647 TTC14Q96N46 770 aa16.4■□□□□ 0.22
CCDC78-209ENST00000474647 TLL1O43897 1013 aa16.39■□□□□ 0.21
CCDC78-209ENST00000474647 DHX16O60231 1041 aaKnown RBP16.39■□□□□ 0.21
CCDC78-209ENST00000474647 MMP3P08254 477 aa16.39■□□□□ 0.21
CCDC78-209ENST00000474647 SNHG28P0DPA3 235 aa16.39■□□□□ 0.21
CCDC78-209ENST00000474647 BMP1P13497 986 aa16.39■□□□□ 0.21
CCDC78-209ENST00000474647 LY6KQ17RY6 165 aa16.39■□□□□ 0.21
CCDC78-209ENST00000474647 GPATCH4Q5T3I0 446 aaKnown RBP16.39■□□□□ 0.21
CCDC78-209ENST00000474647 AFG1LQ8WV93 481 aa16.39■□□□□ 0.21
CCDC78-209ENST00000474647 UBA5Q9GZZ9 404 aa16.39■□□□□ 0.21
CCDC78-209ENST00000474647 RNF41Q9H4P4 317 aaPredicted RBP16.39■□□□□ 0.21
CCDC78-209ENST00000474647 ATG2AQ2TAZ0 1938 aa16.39■□□□□ 0.21
CCDC78-209ENST00000474647 RALGAPA2Q2PPJ7 1873 aa16.38■□□□□ 0.21
CCDC78-209ENST00000474647 BAIAP3O94812 1187 aa16.38■□□□□ 0.21
CCDC78-209ENST00000474647 GH1P01241 217 aa16.38■□□□□ 0.21
CCDC78-209ENST00000474647 PCP11498 1178 aaKnown RBP16.38■□□□□ 0.21
CCDC78-209ENST00000474647 GDF6Q6KF10 455 aaPredicted RBP16.38■□□□□ 0.21
CCDC78-209ENST00000474647 SPRED2Q7Z698 418 aa16.38■□□□□ 0.21
CCDC78-209ENST00000474647 TMCO2Q7Z6W1 182 aaPredicted RBP16.38■□□□□ 0.21
CCDC78-209ENST00000474647 CAGE1Q8TC20 777 aa16.38■□□□□ 0.21
CCDC78-209ENST00000474647 AFAP1L1Q8TED9 768 aa16.38■□□□□ 0.21
CCDC78-209ENST00000474647 ESR2Q92731 530 aa16.38■□□□□ 0.21
CCDC78-209ENST00000474647 ZBED2Q9BTP6 218 aa16.38■□□□□ 0.21
CCDC78-209ENST00000474647 ABCB11O95342 1321 aa16.38■□□□□ 0.21
CCDC78-209ENST00000474647 POU3F3P20264 500 aaPredicted RBP16.37■□□□□ 0.21
CCDC78-209ENST00000474647 RRP1P56182 461 aaKnown RBP16.37■□□□□ 0.21
CCDC78-209ENST00000474647 WDR5P61964 334 aaKnown RBP16.37■□□□□ 0.21
CCDC78-209ENST00000474647 ARHGAP1Q07960 439 aa16.37■□□□□ 0.21
CCDC78-209ENST00000474647 LRRC8DQ7L1W4 858 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms