RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 SLC12A7Q9Y666 1083 aa23.73■■□□□ 1.39
SNX13-206ENST00000474067 ADCY6O43306 1168 aa23.72■■□□□ 1.39
SNX13-206ENST00000474067 ANTXR2P58335 489 aa23.72■■□□□ 1.39
SNX13-206ENST00000474067 KCNV1Q6PIU1 500 aa23.72■■□□□ 1.39
SNX13-206ENST00000474067 NEK1Q96PY6 1258 aa23.72■■□□□ 1.39
SNX13-206ENST00000474067 PURBQ96QR8 312 aaKnown RBP23.72■■□□□ 1.39
SNX13-206ENST00000474067 PDGFCQ9NRA1 345 aa23.72■■□□□ 1.39
SNX13-206ENST00000474067 LCTP09848 1927 aa23.72■■□□□ 1.39
SNX13-206ENST00000474067 MYADML2A6NDP7 307 aa23.71■■□□□ 1.39
SNX13-206ENST00000474067 GCOM1H8Y6P7 765 aaPredicted RBP23.71■■□□□ 1.39
SNX13-206ENST00000474067 SH2B2O14492 632 aaPredicted RBP23.71■■□□□ 1.39
SNX13-206ENST00000474067 KIAA0355O15063 1070 aa23.71■■□□□ 1.39
SNX13-206ENST00000474067 REC8O95072 547 aa23.71■■□□□ 1.39
SNX13-206ENST00000474067 POLR2MP0CAP2 368 aa23.71■■□□□ 1.39
SNX13-206ENST00000474067 HSD17B4P51659 736 aa23.71■■□□□ 1.39
SNX13-206ENST00000474067 OR6J1Q8NGC5 347 aa23.71■■□□□ 1.39
SNX13-206ENST00000474067 EIF3JO75822 258 aaKnown RBP23.7■■□□□ 1.38
SNX13-206ENST00000474067 CENPBP07199 599 aaPredicted RBP23.7■■□□□ 1.38
SNX13-206ENST00000474067 TXNP10599 105 aaKnown RBP23.7■■□□□ 1.38
SNX13-206ENST00000474067 TSGA10IPQ3SY00 556 aa23.7■■□□□ 1.38
SNX13-206ENST00000474067 CUL5Q93034 780 aa23.7■■□□□ 1.38
SNX13-206ENST00000474067 PIGSQ96S52 555 aa23.7■■□□□ 1.38
SNX13-206ENST00000474067 TAF6LQ9Y6J9 622 aa23.7■■□□□ 1.38
SNX13-206ENST00000474067 BEX3Q00994 111 aa23.69■■□□□ 1.38
SNX13-206ENST00000474067 EPB41L2O43491 1005 aaKnown RBP23.68■■□□□ 1.38
SNX13-206ENST00000474067 CDK7P50613 346 aa23.68■■□□□ 1.38
SNX13-206ENST00000474067 ITGA7Q13683 1181 aa23.68■■□□□ 1.38
SNX13-206ENST00000474067 CXCL17Q6UXB2 119 aa23.68■■□□□ 1.38
SNX13-206ENST00000474067 SGMS1Q86VZ5 419 aa23.68■■□□□ 1.38
SNX13-206ENST00000474067 TAAR1Q96RJ0 339 aa23.68■■□□□ 1.38
SNX13-206ENST00000474067 PXMP2Q9NR77 195 aa23.68■■□□□ 1.38
SNX13-206ENST00000474067 RBM28Q9NW13 759 aaKnown RBP23.68■■□□□ 1.38
SNX13-206ENST00000474067 CTAGE5O15320 804 aa23.67■■□□□ 1.38
SNX13-206ENST00000474067 STAM2O75886 525 aa23.67■■□□□ 1.38
SNX13-206ENST00000474067 NR3C2P08235 984 aa23.67■■□□□ 1.38
SNX13-206ENST00000474067 SUPT20HL2P0C7V6 817 aa23.67■■□□□ 1.38
SNX13-206ENST00000474067 FGD1P98174 961 aa23.67■■□□□ 1.38
SNX13-206ENST00000474067 FAAP100Q0VG06 881 aa23.67■■□□□ 1.38
SNX13-206ENST00000474067 DHX32Q7L7V1 743 aaKnown RBP23.67■■□□□ 1.38
SNX13-206ENST00000474067 TEX2Q8IWB9 1127 aa23.67■■□□□ 1.38
SNX13-206ENST00000474067 BADQ92934 168 aa23.67■■□□□ 1.38
SNX13-206ENST00000474067 MTG1Q9BT17 334 aaPredicted RBP23.67■■□□□ 1.38
SNX13-206ENST00000474067 LTBP2Q14767 1821 aa23.67■■□□□ 1.38
SNX13-206ENST00000474067 TRIM43BA6NCK2 446 aa23.66■■□□□ 1.38
SNX13-206ENST00000474067 GH1P01241 217 aa23.66■■□□□ 1.38
SNX13-206ENST00000474067 EIF2AK2P19525 551 aaKnown RBP23.66■■□□□ 1.38
SNX13-206ENST00000474067 FPGSQ05932 587 aa23.66■■□□□ 1.38
SNX13-206ENST00000474067 TMEM199Q8N511 208 aa23.66■■□□□ 1.38
SNX13-206ENST00000474067 TRIM43Q96BQ3 446 aaPredicted RBP23.66■■□□□ 1.38
SNX13-206ENST00000474067 SENP2Q9HC62 589 aa23.66■■□□□ 1.38
SNX13-206ENST00000474067 TRIOBPQ9H2D6 2365 aa23.66■■□□□ 1.38
SNX13-206ENST00000474067 CYTH3O43739 400 aa23.65■■□□□ 1.38
SNX13-206ENST00000474067 TIMP1P01033 207 aa23.65■■□□□ 1.38
SNX13-206ENST00000474067 CCND2P30279 289 aa23.65■■□□□ 1.38
SNX13-206ENST00000474067 RCAN1P53805 252 aa23.65■■□□□ 1.38
SNX13-206ENST00000474067 SEPT14Q6ZU15 432 aa23.65■■□□□ 1.38
SNX13-206ENST00000474067 FAM126BQ8IXS8 530 aa23.65■■□□□ 1.38
SNX13-206ENST00000474067 SLC43A3Q8NBI5 491 aa23.65■■□□□ 1.38
SNX13-206ENST00000474067 TBC1D5Q92609 795 aa23.65■■□□□ 1.38
SNX13-206ENST00000474067 MRVI1Q9Y6F6 885 aa23.65■■□□□ 1.38
SNX13-206ENST00000474067 A6NJR5 290 aa23.64■■□□□ 1.37
SNX13-206ENST00000474067 EIF5BO60841 1220 aaKnown RBP23.64■■□□□ 1.37
SNX13-206ENST00000474067 TGFB3P10600 412 aa23.64■■□□□ 1.37
SNX13-206ENST00000474067 PPIGQ13427 754 aaKnown RBP eCLIP23.64■■□□□ 1.37
SNX13-206ENST00000474067 GNPTABQ3T906 1256 aa23.64■■□□□ 1.37
SNX13-206ENST00000474067 FANCBQ8NB91 859 aa23.64■■□□□ 1.37
SNX13-206ENST00000474067 SMARCC2Q8TAQ2 1214 aa23.64■■□□□ 1.37
SNX13-206ENST00000474067 COL20A1Q9P218 1284 aa23.64■■□□□ 1.37
SNX13-206ENST00000474067 TBX21Q9UL17 535 aa23.64■■□□□ 1.37
SNX13-206ENST00000474067 PPP1R11O60927 126 aaPredicted RBP23.63■■□□□ 1.37
SNX13-206ENST00000474067 MYL3P08590 195 aa23.63■■□□□ 1.37
SNX13-206ENST00000474067 PSMA5P28066 241 aa23.63■■□□□ 1.37
SNX13-206ENST00000474067 PURAQ00577 322 aaKnown RBP23.63■■□□□ 1.37
SNX13-206ENST00000474067 PTPN11Q06124 597 aaPredicted RBP23.63■■□□□ 1.37
SNX13-206ENST00000474067 MFSD5Q6N075 450 aa23.63■■□□□ 1.37
SNX13-206ENST00000474067 XRRA1Q6P2D8 792 aa23.63■■□□□ 1.37
SNX13-206ENST00000474067 SH3RF1Q7Z6J0 888 aa23.63■■□□□ 1.37
SNX13-206ENST00000474067 PDCD2LQ9BRP1 358 aa23.63■■□□□ 1.37
SNX13-206ENST00000474067 PPP4R2Q9NY27 417 aa23.63■■□□□ 1.37
SNX13-206ENST00000474067 DDX49Q9Y6V7 483 aaKnown RBP23.63■■□□□ 1.37
SNX13-206ENST00000474067 CCDC196A0A1B0GTZ2 297 aa23.62■■□□□ 1.37
SNX13-206ENST00000474067 CASTP20810 708 aaKnown RBP23.62■■□□□ 1.37
SNX13-206ENST00000474067 LAMC2Q13753 1193 aa23.62■■□□□ 1.37
SNX13-206ENST00000474067 CCDC62Q6P9F0 684 aa23.62■■□□□ 1.37
SNX13-206ENST00000474067 MICU3Q86XE3 530 aa23.62■■□□□ 1.37
SNX13-206ENST00000474067 MYL10Q9BUA6 226 aa23.62■■□□□ 1.37
SNX13-206ENST00000474067 KATNAL1Q9BW62 490 aa23.62■■□□□ 1.37
SNX13-206ENST00000474067 EHMT1Q9H9B1 1298 aa23.62■■□□□ 1.37
SNX13-206ENST00000474067 hCG_1984214I3L0E3 225 aa23.61■■□□□ 1.37
SNX13-206ENST00000474067 PIK3CDO00329 1044 aa23.61■■□□□ 1.37
SNX13-206ENST00000474067 OPLAHO14841 1288 aa23.61■■□□□ 1.37
SNX13-206ENST00000474067 ZBTB43O43298 467 aa23.61■■□□□ 1.37
SNX13-206ENST00000474067 CD4P01730 458 aa23.61■■□□□ 1.37
SNX13-206ENST00000474067 MYCLP12524 364 aaPredicted RBP23.61■■□□□ 1.37
SNX13-206ENST00000474067 IRX5P78411 483 aaPredicted RBP23.61■■□□□ 1.37
SNX13-206ENST00000474067 PGM5Q15124 567 aa23.61■■□□□ 1.37
SNX13-206ENST00000474067 DGKDQ16760 1214 aa23.61■■□□□ 1.37
SNX13-206ENST00000474067 NFRKBQ6P4R8 1299 aa23.61■■□□□ 1.37
SNX13-206ENST00000474067 APOA5Q6Q788 366 aa23.61■■□□□ 1.37
SNX13-206ENST00000474067 FCHSD1Q86WN1 690 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms