RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 RAD51AP2Q09MP3 1159 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 ZSCAN26Q16670 478 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 RC3H1Q5TC82 1133 aaKnown RBP12.2□□□□□ -0.46
C9orf3-214ENST00000473778 CENPPQ6IPU0 288 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 ILDR2Q71H61 639 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 DYMQ7RTS9 669 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 TXLNBQ8N3L3 684 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 MSL3Q8N5Y2 521 aaKnown RBP12.2□□□□□ -0.46
C9orf3-214ENST00000473778 CCDC155Q8N6L0 562 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 NEDD1Q8NHV4 660 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 COA7Q96BR5 231 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 ERGIC2Q96RQ1 377 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 EIF3CQ99613 913 aaKnown RBP12.2□□□□□ -0.46
C9orf3-214ENST00000473778 CUEDC2Q9H467 287 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 LRWD1Q9UFC0 647 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 SIK3Q9Y2K2 1263 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 ECM1Q16610 540 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 RIN2Q8WYP3 895 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-214ENST00000473778 EFCC1Q9HA90 598 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 FAM207AQ9NSI2 230 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-214ENST00000473778 SALL4Q9UJQ4 1053 aa12.2□□□□□ -0.46
C9orf3-214ENST00000473778 LTBP4Q8N2S1 1624 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 NHSQ6T4R5 1651 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 GPR75-ASB3A0A0A6YYF3 556 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 KRT86O43790 486 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 SYF2O95926 243 aaKnown RBP12.19□□□□□ -0.46
C9orf3-214ENST00000473778 PDHBP11177 359 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 EZH2Q15910 746 aaKnown RBP12.19□□□□□ -0.46
C9orf3-214ENST00000473778 MUM1L1Q5H9M0 696 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 NOC3LQ8WTT2 800 aaKnown RBP12.19□□□□□ -0.46
C9orf3-214ENST00000473778 YY1AP1Q9H869 796 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 MLXIPQ9HAP2 919 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 MAGEF1Q9HAY2 307 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 CD209Q9NNX6 404 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 PSD3Q9NYI0 1048 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 LCMT1Q9UIC8 334 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 LEMD3Q9Y2U8 911 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-214ENST00000473778 RTCBQ9Y3I0 505 aaKnown RBP12.19□□□□□ -0.46
C9orf3-214ENST00000473778 MYH7BA7E2Y1 1941 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 BICDL2A1A5D9 508 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 UBAP1LF5GYI3 381 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 TNNT3P45378 269 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-214ENST00000473778 NOVP48745 357 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 KRT83P78385 493 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 MRPS25P82663 173 aaKnown RBP12.19□□□□□ -0.46
C9orf3-214ENST00000473778 C2orf54Q08AI8 447 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 TSR1Q2NL82 804 aaKnown RBP12.19□□□□□ -0.46
C9orf3-214ENST00000473778 FOXR1Q6PIV2 292 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 TEX11Q8IYF3 940 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 REXO1Q8N1G1 1221 aaKnown RBP12.19□□□□□ -0.46
C9orf3-214ENST00000473778 RETREG2Q8NC44 543 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 COG1Q8WTW3 980 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 HDAC7Q8WUI4 952 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 CCDC102AQ96A19 550 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 RRP36Q96EU6 259 aaKnown RBP12.19□□□□□ -0.46
C9orf3-214ENST00000473778 PCMTD1Q96MG8 357 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-214ENST00000473778 LZTS2Q9BRK4 669 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 RIOX1Q9H6W3 641 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 C6orf50Q9HD87 102 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 CCNL1Q9UK58 526 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-214ENST00000473778 PLAGL2Q9UPG8 496 aa12.19□□□□□ -0.46
C9orf3-214ENST00000473778 FOCADQ5VW36 1801 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 SLURP2P0DP57 97 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 IDEP14735 1019 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 CYLC1P35663 651 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-214ENST00000473778 VAV2P52735 878 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 EIF6P56537 245 aaKnown RBP12.18□□□□□ -0.46
C9orf3-214ENST00000473778 TUBB4BP68371 445 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 GSTO1P78417 241 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 LRRC41Q15345 812 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 FIGNQ5HY92 759 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 C2CD5Q86YS7 1000 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 CREG2Q8IUH2 290 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 AMOTL1Q8IY63 956 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 CCDC170Q8IYT3 715 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 LRRC47Q8N1G4 583 aaKnown RBP12.18□□□□□ -0.46
C9orf3-214ENST00000473778 NUP58Q9BVL2 599 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 FGFBP2Q9BYJ0 223 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 NDST4Q9H3R1 872 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 SMARCAL1Q9NZC9 954 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 A0A1W2PQJ5 194 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 PPP1R11O60927 126 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-214ENST00000473778 GNA11P29992 359 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 SEMA3FQ13275 785 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 VWA3BQ502W6 1294 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 COBLL1Q53SF7 1204 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 LRRC55Q6ZSA7 311 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 ZNF804AQ7Z570 1209 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 UIMC1Q96RL1 719 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 EHD2Q9NZN4 543 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 HPCAL4Q9UM19 191 aa12.18□□□□□ -0.46
C9orf3-214ENST00000473778 ARFGEF1Q9Y6D6 1849 aa12.17□□□□□ -0.46
C9orf3-214ENST00000473778 UFL1O94874 794 aa12.17□□□□□ -0.46
C9orf3-214ENST00000473778 HNRNPH3P31942 346 aaKnown RBP12.17□□□□□ -0.46
C9orf3-214ENST00000473778 CDK17Q00537 523 aa12.17□□□□□ -0.46
C9orf3-214ENST00000473778 EHHADHQ08426 723 aa12.17□□□□□ -0.46
C9orf3-214ENST00000473778 GPS2Q13227 327 aa12.17□□□□□ -0.46
C9orf3-214ENST00000473778 CALCRLQ16602 461 aa12.17□□□□□ -0.46
C9orf3-214ENST00000473778 CNNM4Q6P4Q7 775 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms