RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 DEFB103AP81534 67 aa14.91□□□□□ -0.02
TRAF4-209ENST00000473421 DCAF4Q8WV16 495 aa14.91□□□□□ -0.02
TRAF4-209ENST00000473421 GPATCH3Q96I76 525 aa14.91□□□□□ -0.02
TRAF4-209ENST00000473421 FTOQ9C0B1 505 aaKnown RBP eCLIP14.91□□□□□ -0.02
TRAF4-209ENST00000473421 SLC3A2P08195 630 aaKnown RBP14.9□□□□□ -0.02
TRAF4-209ENST00000473421 FGRP09769 529 aa14.9□□□□□ -0.02
TRAF4-209ENST00000473421 CPT1AP50416 773 aa14.9□□□□□ -0.02
TRAF4-209ENST00000473421 GDF6Q6KF10 455 aaPredicted RBP14.9□□□□□ -0.02
TRAF4-209ENST00000473421 RNF207Q6ZRF8 634 aa14.9□□□□□ -0.02
TRAF4-209ENST00000473421 GDPD5Q8WTR4 605 aa14.9□□□□□ -0.02
TRAF4-209ENST00000473421 KAT2BQ92831 832 aa14.9□□□□□ -0.02
TRAF4-209ENST00000473421 SLC9A7Q96T83 725 aa14.9□□□□□ -0.02
TRAF4-209ENST00000473421 C1QTNF1Q9BXJ1 281 aa14.9□□□□□ -0.02
TRAF4-209ENST00000473421 ANAPC4Q9UJX5 808 aa14.9□□□□□ -0.02
TRAF4-209ENST00000473421 PITPNM1O00562 1244 aa14.89□□□□□ -0.03
TRAF4-209ENST00000473421 GTPBP6O43824 516 aaPredicted RBP14.89□□□□□ -0.03
TRAF4-209ENST00000473421 ORC4O43929 436 aa14.89□□□□□ -0.03
TRAF4-209ENST00000473421 TXNP10599 105 aaKnown RBP14.89□□□□□ -0.03
TRAF4-209ENST00000473421 PDHBP11177 359 aa14.89□□□□□ -0.03
TRAF4-209ENST00000473421 PPP2R5BQ15173 497 aa14.89□□□□□ -0.03
TRAF4-209ENST00000473421 AAK1Q2M2I8 961 aa14.89□□□□□ -0.03
TRAF4-209ENST00000473421 RRP12Q5JTH9 1297 aaKnown RBP14.89□□□□□ -0.03
TRAF4-209ENST00000473421 NFRKBQ6P4R8 1299 aa14.89□□□□□ -0.03
TRAF4-209ENST00000473421 CCDC62Q6P9F0 684 aa14.89□□□□□ -0.03
TRAF4-209ENST00000473421 PHOSPHO2Q8TCD6 241 aa14.89□□□□□ -0.03
TRAF4-209ENST00000473421 AFG1LQ8WV93 481 aa14.89□□□□□ -0.03
TRAF4-209ENST00000473421 WNT8BQ93098 351 aa14.89□□□□□ -0.03
TRAF4-209ENST00000473421 GPHNQ9NQX3 736 aaPredicted RBP14.89□□□□□ -0.03
TRAF4-209ENST00000473421 COL20A1Q9P218 1284 aa14.89□□□□□ -0.03
TRAF4-209ENST00000473421 ADD3Q9UEY8 706 aaKnown RBP14.89□□□□□ -0.03
TRAF4-209ENST00000473421 SALL3Q9BXA9 1300 aa14.89□□□□□ -0.03
TRAF4-209ENST00000473421 NBNO60934 754 aa14.88□□□□□ -0.03
TRAF4-209ENST00000473421 GOLGA8HP0CJ92 632 aa14.88□□□□□ -0.03
TRAF4-209ENST00000473421 ACTN1P12814 892 aa14.88□□□□□ -0.03
TRAF4-209ENST00000473421 WDR5P61964 334 aaKnown RBP14.88□□□□□ -0.03
TRAF4-209ENST00000473421 PDE4DQ08499 809 aa14.88□□□□□ -0.03
TRAF4-209ENST00000473421 HIC1Q14526 733 aa14.88□□□□□ -0.03
TRAF4-209ENST00000473421 PTGISQ16647 500 aa14.88□□□□□ -0.03
TRAF4-209ENST00000473421 LY6KQ17RY6 165 aa14.88□□□□□ -0.03
TRAF4-209ENST00000473421 RETREG2Q8NC44 543 aa14.88□□□□□ -0.03
TRAF4-209ENST00000473421 HLA-CQ95604 372 aa14.88□□□□□ -0.03
TRAF4-209ENST00000473421 FAM227BQ96M60 508 aa14.88□□□□□ -0.03
TRAF4-209ENST00000473421 CHMP4BQ9H444 224 aaKnown RBP14.88□□□□□ -0.03
TRAF4-209ENST00000473421 MTUS1Q9ULD2 1270 aa14.88□□□□□ -0.03
TRAF4-209ENST00000473421 TTC41PQ6P2S7 1318 aa14.88□□□□□ -0.03
TRAF4-209ENST00000473421 FGAP02671 866 aa14.87□□□□□ -0.03
TRAF4-209ENST00000473421 TOP1P11387 765 aaKnown RBP14.87□□□□□ -0.03
TRAF4-209ENST00000473421 RFC2P35250 354 aa14.87□□□□□ -0.03
TRAF4-209ENST00000473421 HAND2P61296 217 aa14.87□□□□□ -0.03
TRAF4-209ENST00000473421 ZNF543Q08ER8 600 aa14.87□□□□□ -0.03
TRAF4-209ENST00000473421 TRAF7Q6Q0C0 670 aa14.87□□□□□ -0.03
TRAF4-209ENST00000473421 SCFD2Q8WU76 684 aa14.87□□□□□ -0.03
TRAF4-209ENST00000473421 TAAR1Q96RJ0 339 aa14.87□□□□□ -0.03
TRAF4-209ENST00000473421 UBA5Q9GZZ9 404 aa14.87□□□□□ -0.03
TRAF4-209ENST00000473421 SUGCTQ9HAC7 445 aa14.87□□□□□ -0.03
TRAF4-209ENST00000473421 COG5Q9UP83 839 aa14.87□□□□□ -0.03
TRAF4-209ENST00000473421 A0A0D9SFI3 127 aa14.86□□□□□ -0.03
TRAF4-209ENST00000473421 MX1P20591 662 aa14.86□□□□□ -0.03
TRAF4-209ENST00000473421 ZNF200P98182 395 aaPredicted RBP14.86□□□□□ -0.03
TRAF4-209ENST00000473421 ARHGAP1Q07960 439 aa14.86□□□□□ -0.03
TRAF4-209ENST00000473421 MBTPS1Q14703 1052 aa14.86□□□□□ -0.03
TRAF4-209ENST00000473421 USH1GQ495M9 461 aa14.86□□□□□ -0.03
TRAF4-209ENST00000473421 CHST3Q7LGC8 479 aa14.86□□□□□ -0.03
TRAF4-209ENST00000473421 ZNF589Q86UQ0 364 aaPredicted RBP14.86□□□□□ -0.03
TRAF4-209ENST00000473421 TOMM22Q9NS69 142 aa14.86□□□□□ -0.03
TRAF4-209ENST00000473421 MMP3P08254 477 aa14.85□□□□□ -0.03
TRAF4-209ENST00000473421 SNHG28P0DPA3 235 aa14.85□□□□□ -0.03
TRAF4-209ENST00000473421 BFSP2Q13515 415 aa14.85□□□□□ -0.03
TRAF4-209ENST00000473421 ALX1Q15699 326 aa14.85□□□□□ -0.03
TRAF4-209ENST00000473421 TMEM31Q5JXX7 168 aa14.85□□□□□ -0.03
TRAF4-209ENST00000473421 FAM117BQ6P1L5 589 aa14.85□□□□□ -0.03
TRAF4-209ENST00000473421 SEPT14Q6ZU15 432 aa14.85□□□□□ -0.03
TRAF4-209ENST00000473421 TBC1D10CQ8IV04 446 aa14.85□□□□□ -0.03
TRAF4-209ENST00000473421 ZKSCAN3Q9BRR0 538 aa14.85□□□□□ -0.03
TRAF4-209ENST00000473421 OSBPL7Q9BZF2 842 aa14.85□□□□□ -0.03
TRAF4-209ENST00000473421 HDAC6Q9UBN7 1215 aa14.85□□□□□ -0.03
TRAF4-209ENST00000473421 LOC102724159A0A0B4J2E5 919 aa14.84□□□□□ -0.03
TRAF4-209ENST00000473421 LINC01553A4QN01 128 aa14.84□□□□□ -0.03
TRAF4-209ENST00000473421 KIF28PB7ZC32 967 aa14.84□□□□□ -0.03
TRAF4-209ENST00000473421 NKRFO15226 690 aaKnown RBP eCLIP14.84□□□□□ -0.032e-7■■□□□ 13.2
TRAF4-209ENST00000473421 KPNA6O60684 536 aa14.84□□□□□ -0.03
TRAF4-209ENST00000473421 CKBP12277 381 aa14.84□□□□□ -0.03
TRAF4-209ENST00000473421 PTPN11Q06124 597 aaPredicted RBP14.84□□□□□ -0.03
TRAF4-209ENST00000473421 PWP2Q15269 919 aaKnown RBP14.84□□□□□ -0.03
TRAF4-209ENST00000473421 TRIM71Q2Q1W2 868 aaKnown RBP14.84□□□□□ -0.03
TRAF4-209ENST00000473421 LRRFIP1Q32MZ4 808 aaKnown RBP14.84□□□□□ -0.03
TRAF4-209ENST00000473421 PPP4R3BQ5MIZ7 849 aa14.84□□□□□ -0.03
TRAF4-209ENST00000473421 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.84□□□□□ -0.03
TRAF4-209ENST00000473421 LRRC8DQ7L1W4 858 aa14.84□□□□□ -0.03
TRAF4-209ENST00000473421 TCP11L1Q9NUJ3 509 aa14.84□□□□□ -0.03
TRAF4-209ENST00000473421 NOD1Q9Y239 953 aa14.84□□□□□ -0.03
TRAF4-209ENST00000473421 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.83□□□□□ -0.04
TRAF4-209ENST00000473421 SORBS3O60504 671 aa14.83□□□□□ -0.04
TRAF4-209ENST00000473421 BAIAP3O94812 1187 aa14.83□□□□□ -0.04
TRAF4-209ENST00000473421 CXCL10P02778 98 aa14.83□□□□□ -0.04
TRAF4-209ENST00000473421 HSPD1P10809 573 aaKnown RBP14.83□□□□□ -0.04
TRAF4-209ENST00000473421 SELPP16109 830 aa14.83□□□□□ -0.04
TRAF4-209ENST00000473421 KCNJ6P48051 423 aa14.83□□□□□ -0.04
TRAF4-209ENST00000473421 SESTD1Q86VW0 696 aa14.83□□□□□ -0.04
TRAF4-209ENST00000473421 DNERQ8NFT8 737 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms