RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 HDAC7Q8WUI4 952 aa22.74■■□□□ 1.23
FSCN1-205ENST00000473330 LRRC1Q9BTT6 524 aa22.74■■□□□ 1.23
FSCN1-205ENST00000473330 PLEKHA4Q9H4M7 779 aa22.74■■□□□ 1.23
FSCN1-205ENST00000473330 FAM207AQ9NSI2 230 aaPredicted RBP22.74■■□□□ 1.23
FSCN1-205ENST00000473330 EIF4A3P38919 411 aaKnown RBP22.73■■□□□ 1.23
FSCN1-205ENST00000473330 ITIH3Q06033 890 aa22.73■■□□□ 1.23
FSCN1-205ENST00000473330 CCDC24Q8N4L8 307 aa22.73■■□□□ 1.23
FSCN1-205ENST00000473330 TGFBRAP1Q8WUH2 860 aa22.73■■□□□ 1.23
FSCN1-205ENST00000473330 SMARCC1Q92922 1105 aaPredicted RBP22.73■■□□□ 1.23
FSCN1-205ENST00000473330 DRC1Q96MC2 740 aa22.73■■□□□ 1.23
FSCN1-205ENST00000473330 C6orf50Q9HD87 102 aa22.73■■□□□ 1.23
FSCN1-205ENST00000473330 VGLL3A8MV65 326 aa22.73■■□□□ 1.23
FSCN1-205ENST00000473330 LDHBP07195 334 aaKnown RBP22.73■■□□□ 1.23
FSCN1-205ENST00000473330 DIXDC1Q155Q3 683 aa22.73■■□□□ 1.23
FSCN1-205ENST00000473330 CCDC70Q6NSX1 233 aa22.73■■□□□ 1.23
FSCN1-205ENST00000473330 POTEDQ86YR6 584 aa22.73■■□□□ 1.23
FSCN1-205ENST00000473330 AMOTL1Q8IY63 956 aa22.73■■□□□ 1.23
FSCN1-205ENST00000473330 TBCKQ8TEA7 893 aa22.73■■□□□ 1.23
FSCN1-205ENST00000473330 CALML4Q96GE6 196 aa22.73■■□□□ 1.23
FSCN1-205ENST00000473330 BLOC1S4Q9NUP1 217 aa22.73■■□□□ 1.23
FSCN1-205ENST00000473330 DMGDHQ9UI17 866 aaKnown RBP22.73■■□□□ 1.23
FSCN1-205ENST00000473330 PPFIA4O75335 1185 aa22.72■■□□□ 1.23
FSCN1-205ENST00000473330 GNA11P29992 359 aa22.72■■□□□ 1.23
FSCN1-205ENST00000473330 KCNQ4P56696 695 aa22.72■■□□□ 1.23
FSCN1-205ENST00000473330 GRB10Q13322 594 aa22.72■■□□□ 1.23
FSCN1-205ENST00000473330 GRIK5Q16478 980 aa22.72■■□□□ 1.23
FSCN1-205ENST00000473330 SV2BQ7L1I2 683 aa22.72■■□□□ 1.23
FSCN1-205ENST00000473330 SPATA4Q8NEY3 305 aa22.72■■□□□ 1.23
FSCN1-205ENST00000473330 OSBPL9Q96SU4 736 aa22.72■■□□□ 1.23
FSCN1-205ENST00000473330 MYMKA6NI61 221 aa22.72■■□□□ 1.23
FSCN1-205ENST00000473330 THRAP3Q9Y2W1 955 aaKnown RBP22.72■■□□□ 1.23
FSCN1-205ENST00000473330 GOLGA6BA6NDN3 693 aa22.71■■□□□ 1.23
FSCN1-205ENST00000473330 MAN2A1Q16706 1144 aa22.71■■□□□ 1.23
FSCN1-205ENST00000473330 NFRKBQ6P4R8 1299 aa22.71■■□□□ 1.23
FSCN1-205ENST00000473330 MMRN2Q9H8L6 949 aa22.71■■□□□ 1.23
FSCN1-205ENST00000473330 SAP30BPQ9UHR5 308 aaKnown RBP22.71■■□□□ 1.23
FSCN1-205ENST00000473330 LRRC53A6NM62 1247 aa22.7■■□□□ 1.23
FSCN1-205ENST00000473330 SHOX2O60902 331 aaPredicted RBP22.7■■□□□ 1.23
FSCN1-205ENST00000473330 TXKP42681 527 aa22.7■■□□□ 1.23
FSCN1-205ENST00000473330 USP17L2Q6R6M4 530 aa22.7■■□□□ 1.23
FSCN1-205ENST00000473330 UNC13DQ70J99 1090 aa22.7■■□□□ 1.23
FSCN1-205ENST00000473330 MAPKAPK5Q8IW41 473 aa22.7■■□□□ 1.23
FSCN1-205ENST00000473330 RRP36Q96EU6 259 aaKnown RBP22.7■■□□□ 1.23
FSCN1-205ENST00000473330 PNMA5Q96PV4 448 aa22.7■■□□□ 1.23
FSCN1-205ENST00000473330 DEF6Q9H4E7 631 aa22.7■■□□□ 1.23
FSCN1-205ENST00000473330 BIN2Q9UBW5 565 aaPredicted RBP22.7■■□□□ 1.23
FSCN1-205ENST00000473330 PPP4CP60510 307 aa22.7■■□□□ 1.22
FSCN1-205ENST00000473330 SND1Q7KZF4 910 aaKnown RBP eCLIP22.7■■□□□ 1.22
FSCN1-205ENST00000473330 GPIHBP1Q8IV16 184 aa22.7■■□□□ 1.22
FSCN1-205ENST00000473330 NAV1Q8NEY1 1877 aa22.7■■□□□ 1.22
FSCN1-205ENST00000473330 NYXQ9GZU5 481 aa22.7■■□□□ 1.22
FSCN1-205ENST00000473330 SALL4Q9UJQ4 1053 aa22.7■■□□□ 1.22
FSCN1-205ENST00000473330 MYH10P35580 1976 aa22.7■■□□□ 1.22
FSCN1-205ENST00000473330 PVALEFA0A1B0GWK0 134 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 AKR1B10O60218 316 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 BAG3O95817 575 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 TM4SF1P30408 202 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 MRPS25P82663 173 aaKnown RBP22.69■■□□□ 1.22
FSCN1-205ENST00000473330 RRAGAQ7L523 313 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 FAM76AQ8TAV0 307 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 WDR66Q8TBY9 1149 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 BAP1Q92560 729 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 RUBCNQ92622 972 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 MTMR9Q96QG7 549 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 VAT1LQ9HCJ6 419 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 TMEM260Q9NX78 707 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 SMARCAL1Q9NZC9 954 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 HYOU1Q9Y4L1 999 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 TCP1P17987 556 aaKnown RBP22.69■■□□□ 1.22
FSCN1-205ENST00000473330 CXCR5P32302 372 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 SLC7A5Q01650 507 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 SOGA3Q5TF21 947 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 DYMQ7RTS9 669 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 CCDC84Q86UT8 332 aaPredicted RBP22.69■■□□□ 1.22
FSCN1-205ENST00000473330 SLC51AQ86UW1 340 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 NBPF5PQ86XG9 351 aaPredicted RBP22.69■■□□□ 1.22
FSCN1-205ENST00000473330 GUF1Q8N442 669 aaKnown RBP22.69■■□□□ 1.22
FSCN1-205ENST00000473330 PIGSQ96S52 555 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 EHD2Q9NZN4 543 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 ABCB11O95342 1321 aa22.69■■□□□ 1.22
FSCN1-205ENST00000473330 SNED1Q8TER0 1413 aa22.68■■□□□ 1.22
FSCN1-205ENST00000473330 GOLGA6CA6NDK9 693 aa22.68■■□□□ 1.22
FSCN1-205ENST00000473330 PJA2O43164 708 aa22.68■■□□□ 1.22
FSCN1-205ENST00000473330 GOLGA6DP0CG33 693 aa22.68■■□□□ 1.22
FSCN1-205ENST00000473330 MATR3P43243 847 aaKnown RBP eCLIP22.68■■□□□ 1.22
FSCN1-205ENST00000473330 LARP4BQ92615 738 aaKnown RBP22.68■■□□□ 1.22
FSCN1-205ENST00000473330 ALS2CR12Q96Q35 445 aa22.68■■□□□ 1.22
FSCN1-205ENST00000473330 PSMB7Q99436 277 aa22.68■■□□□ 1.22
FSCN1-205ENST00000473330 GOLGA6AQ9NYA3 693 aa22.68■■□□□ 1.22
FSCN1-205ENST00000473330 STK17AQ9UEE5 414 aa22.68■■□□□ 1.22
FSCN1-205ENST00000473330 MAGEA1P43355 309 aa22.67■■□□□ 1.22
FSCN1-205ENST00000473330 MAGEA9P43362 315 aa22.67■■□□□ 1.22
FSCN1-205ENST00000473330 CORO7P57737 925 aa22.67■■□□□ 1.22
FSCN1-205ENST00000473330 ATP2B2Q01814 1243 aa22.67■■□□□ 1.22
FSCN1-205ENST00000473330 ORC2Q13416 577 aaPredicted RBP22.67■■□□□ 1.22
FSCN1-205ENST00000473330 ASTE1Q2TB18 679 aaPredicted RBP22.67■■□□□ 1.22
FSCN1-205ENST00000473330 SETDB2Q96T68 719 aa22.67■■□□□ 1.22
FSCN1-205ENST00000473330 EYA3Q99504 573 aa22.67■■□□□ 1.22
FSCN1-205ENST00000473330 SEC63Q9UGP8 760 aaKnown RBP22.67■■□□□ 1.22
FSCN1-205ENST00000473330 SRP68Q9UHB9 627 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms