RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 SH3GLB2Q9NR46 395 aa23.9■■□□□ 1.42
TOP3A-204ENST00000472959 ESYT2A0FGR8 921 aa23.89■■□□□ 1.41
TOP3A-204ENST00000472959 SMCO2A6NFE2 343 aa23.89■■□□□ 1.41
TOP3A-204ENST00000472959 SEPT4O43236 478 aa23.89■■□□□ 1.41
TOP3A-204ENST00000472959 ZNF865P0CJ78 1059 aaPredicted RBP23.89■■□□□ 1.41
TOP3A-204ENST00000472959 CNGA1P29973 690 aa23.89■■□□□ 1.41
TOP3A-204ENST00000472959 PDE4DQ08499 809 aa23.89■■□□□ 1.41
TOP3A-204ENST00000472959 USP17L6PQ6QN14 398 aa23.89■■□□□ 1.41
TOP3A-204ENST00000472959 FCHSD1Q86WN1 690 aa23.89■■□□□ 1.41
TOP3A-204ENST00000472959 FAM177A1Q8N128 213 aaPredicted RBP23.89■■□□□ 1.41
TOP3A-204ENST00000472959 DEFB118Q96PH6 123 aa23.89■■□□□ 1.41
TOP3A-204ENST00000472959 PXMP2Q9NR77 195 aa23.89■■□□□ 1.41
TOP3A-204ENST00000472959 CTDNEP1O95476 244 aa23.88■■□□□ 1.41
TOP3A-204ENST00000472959 GJA8P48165 433 aa23.88■■□□□ 1.41
TOP3A-204ENST00000472959 ADCY7P51828 1080 aa23.88■■□□□ 1.41
TOP3A-204ENST00000472959 CCDC148Q8NFR7 591 aa23.88■■□□□ 1.41
TOP3A-204ENST00000472959 U2AF1L4Q8WU68 220 aaKnown RBP23.88■■□□□ 1.41
TOP3A-204ENST00000472959 KATNBL1Q9H079 304 aa23.88■■□□□ 1.41
TOP3A-204ENST00000472959 ZMYND12Q9H0C1 365 aa23.88■■□□□ 1.41
TOP3A-204ENST00000472959 VTA1Q9NP79 307 aa23.88■■□□□ 1.41
TOP3A-204ENST00000472959 DDX20Q9UHI6 824 aaKnown RBP23.88■■□□□ 1.41
TOP3A-204ENST00000472959 ZHX1Q9UKY1 873 aaPredicted RBP23.88■■□□□ 1.41
TOP3A-204ENST00000472959 PLXNA1Q9UIW2 1896 aa23.87■■□□□ 1.41
TOP3A-204ENST00000472959 SGPL1O95470 568 aa23.87■■□□□ 1.41
TOP3A-204ENST00000472959 WASF1Q92558 559 aa23.87■■□□□ 1.41
TOP3A-204ENST00000472959 LLPHQ9BRT6 129 aaKnown RBP23.87■■□□□ 1.41
TOP3A-204ENST00000472959 C6orf50Q9HD87 102 aa23.87■■□□□ 1.41
TOP3A-204ENST00000472959 FAM184BQ9ULE4 1060 aa23.87■■□□□ 1.41
TOP3A-204ENST00000472959 AKR1A1P14550 325 aa23.86■■□□□ 1.41
TOP3A-204ENST00000472959 EIF2AK2P19525 551 aaKnown RBP23.86■■□□□ 1.41
TOP3A-204ENST00000472959 GNA11P29992 359 aa23.86■■□□□ 1.41
TOP3A-204ENST00000472959 STXBP2Q15833 593 aa23.86■■□□□ 1.41
TOP3A-204ENST00000472959 PDCD2LQ9BRP1 358 aa23.86■■□□□ 1.41
TOP3A-204ENST00000472959 CRISPLD2Q9H0B8 497 aa23.86■■□□□ 1.41
TOP3A-204ENST00000472959 ORC3Q9UBD5 711 aaPredicted RBP23.86■■□□□ 1.41
TOP3A-204ENST00000472959 POTEFA5A3E0 1075 aa23.85■■□□□ 1.41
TOP3A-204ENST00000472959 SPDYE3A6NKU9 549 aa23.85■■□□□ 1.41
TOP3A-204ENST00000472959 FOSP01100 380 aaPredicted RBP23.85■■□□□ 1.41
TOP3A-204ENST00000472959 NR3C2P08235 984 aa23.85■■□□□ 1.41
TOP3A-204ENST00000472959 SOX10P56693 466 aa23.85■■□□□ 1.41
TOP3A-204ENST00000472959 LHX8Q68G74 356 aa23.85■■□□□ 1.41
TOP3A-204ENST00000472959 MCTP2Q6DN12 878 aa23.85■■□□□ 1.41
TOP3A-204ENST00000472959 NSUN7Q8NE18 718 aaKnown RBP23.85■■□□□ 1.41
TOP3A-204ENST00000472959 BICD2Q8TD16 824 aa23.85■■□□□ 1.41
TOP3A-204ENST00000472959 DDX49Q9Y6V7 483 aaKnown RBP23.85■■□□□ 1.41
TOP3A-204ENST00000472959 FRMPD4Q14CM0 1322 aa23.84■■□□□ 1.41
TOP3A-204ENST00000472959 CENPFP49454 3210 aa23.84■■□□□ 1.41
TOP3A-204ENST00000472959 EIF3JO75822 258 aaKnown RBP23.84■■□□□ 1.41
TOP3A-204ENST00000472959 TFRCP02786 760 aaKnown RBP23.84■■□□□ 1.41
TOP3A-204ENST00000472959 ST3GAL1Q11201 340 aa23.84■■□□□ 1.41
TOP3A-204ENST00000472959 UBE2SQ16763 222 aa23.84■■□□□ 1.41
TOP3A-204ENST00000472959 CCDC144BQ3MJ40 725 aa23.84■■□□□ 1.41
TOP3A-204ENST00000472959 CCDC83Q8IWF9 413 aa23.84■■□□□ 1.41
TOP3A-204ENST00000472959 VPS54Q9P1Q0 977 aa23.84■■□□□ 1.41
TOP3A-204ENST00000472959 RARBP10826 455 aa23.83■■□□□ 1.41
TOP3A-204ENST00000472959 XBP1P17861 261 aa23.83■■□□□ 1.41
TOP3A-204ENST00000472959 CCND2P30279 289 aa23.83■■□□□ 1.41
TOP3A-204ENST00000472959 AP3B2Q13367 1082 aa23.83■■□□□ 1.41
TOP3A-204ENST00000472959 PGM5Q15124 567 aa23.83■■□□□ 1.41
TOP3A-204ENST00000472959 IQSEC1Q6DN90 963 aa23.83■■□□□ 1.41
TOP3A-204ENST00000472959 TAPT1Q6NXT6 567 aa23.83■■□□□ 1.41
TOP3A-204ENST00000472959 XRRA1Q6P2D8 792 aa23.83■■□□□ 1.41
TOP3A-204ENST00000472959 EEPD1Q7L9B9 569 aa23.83■■□□□ 1.41
TOP3A-204ENST00000472959 VSIG10LQ86VR7 867 aa23.83■■□□□ 1.41
TOP3A-204ENST00000472959 FBXO16Q8IX29 292 aaPredicted RBP23.83■■□□□ 1.41
TOP3A-204ENST00000472959 EHMT1Q9H9B1 1298 aa23.83■■□□□ 1.41
TOP3A-204ENST00000472959 OGDHLQ9ULD0 1010 aa23.83■■□□□ 1.41
TOP3A-204ENST00000472959 RBBP6Q7Z6E9 1792 aaKnown RBP23.83■■□□□ 1.4
TOP3A-204ENST00000472959 RBM47A0AV96 593 aaKnown RBP23.82■■□□□ 1.4
TOP3A-204ENST00000472959 CD2BP2O95400 341 aaKnown RBP23.82■■□□□ 1.4
TOP3A-204ENST00000472959 FDPSP14324 419 aaKnown RBP23.82■■□□□ 1.4
TOP3A-204ENST00000472959 NLRP5P59047 1200 aa23.82■■□□□ 1.4
TOP3A-204ENST00000472959 GALNT17Q6IS24 598 aa23.82■■□□□ 1.4
TOP3A-204ENST00000472959 TMX3Q96JJ7 454 aa23.82■■□□□ 1.4
TOP3A-204ENST00000472959 PCDHA6Q9UN73 950 aa23.82■■□□□ 1.4
TOP3A-204ENST00000472959 PCDHA8Q9Y5H6 950 aa23.82■■□□□ 1.4
TOP3A-204ENST00000472959 LCTP09848 1927 aa23.82■■□□□ 1.4
TOP3A-204ENST00000472959 DUSP11O75319 330 aaKnown RBP23.81■■□□□ 1.4
TOP3A-204ENST00000472959 STAM2O75886 525 aa23.81■■□□□ 1.4
TOP3A-204ENST00000472959 MYCLP12524 364 aaPredicted RBP23.81■■□□□ 1.4
TOP3A-204ENST00000472959 EN2P19622 333 aaPredicted RBP23.81■■□□□ 1.4
TOP3A-204ENST00000472959 CLK2P49760 499 aaKnown RBP23.81■■□□□ 1.4
TOP3A-204ENST00000472959 TNFAIP2Q03169 654 aa23.81■■□□□ 1.4
TOP3A-204ENST00000472959 REXO1Q8N1G1 1221 aaKnown RBP23.81■■□□□ 1.4
TOP3A-204ENST00000472959 ANKLE1Q8NAG6 615 aa23.81■■□□□ 1.4
TOP3A-204ENST00000472959 SCFD2Q8WU76 684 aa23.81■■□□□ 1.4
TOP3A-204ENST00000472959 AIFM3Q96NN9 605 aa23.81■■□□□ 1.4
TOP3A-204ENST00000472959 PDGFCQ9NRA1 345 aa23.81■■□□□ 1.4
TOP3A-204ENST00000472959 KIAA0100Q14667 2235 aaKnown RBP23.81■■□□□ 1.4
TOP3A-204ENST00000472959 JAK2O60674 1132 aa23.8■■□□□ 1.4
TOP3A-204ENST00000472959 ADCYAP1R1P41586 468 aa23.8■■□□□ 1.4
TOP3A-204ENST00000472959 HMGN5P82970 282 aaKnown RBP23.8■■□□□ 1.4
TOP3A-204ENST00000472959 PCNX4Q63HM2 1172 aa23.8■■□□□ 1.4
TOP3A-204ENST00000472959 IL31RAQ8NI17 732 aa23.8■■□□□ 1.4
TOP3A-204ENST00000472959 SHISA4Q96DD7 197 aa23.8■■□□□ 1.4
TOP3A-204ENST00000472959 ALG1Q9BT22 464 aa23.8■■□□□ 1.4
TOP3A-204ENST00000472959 ANO1Q5XXA6 986 aa23.79■■□□□ 1.4
TOP3A-204ENST00000472959 ARRDC4Q8NCT1 418 aa23.79■■□□□ 1.4
TOP3A-204ENST00000472959 WDR11Q9BZH6 1224 aa23.79■■□□□ 1.4
TOP3A-204ENST00000472959 PCDHA4Q9UN74 947 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms