RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 TRMT44Q8IYL2 757 aaKnown RBP19.23■□□□□ 0.67
CCM2-205ENST00000472223 FAM133AQ8N9E0 248 aa19.23■□□□□ 0.67
CCM2-205ENST00000472223 RASGRP4Q8TDF6 673 aa19.23■□□□□ 0.67
CCM2-205ENST00000472223 OXER1Q8TDS5 423 aa19.23■□□□□ 0.67
CCM2-205ENST00000472223 SHISA4Q96DD7 197 aa19.23■□□□□ 0.67
CCM2-205ENST00000472223 ARHGAP39Q9C0H5 1083 aa19.23■□□□□ 0.67
CCM2-205ENST00000472223 PXMP2Q9NR77 195 aa19.23■□□□□ 0.67
CCM2-205ENST00000472223 MTMR6Q9Y217 621 aa19.23■□□□□ 0.67
CCM2-205ENST00000472223 DNAJC25-GNG10A0A024R161 153 aa19.22■□□□□ 0.67
CCM2-205ENST00000472223 EIF2AK2P19525 551 aaKnown RBP19.22■□□□□ 0.67
CCM2-205ENST00000472223 CYP2B6P20813 491 aa19.22■□□□□ 0.67
CCM2-205ENST00000472223 U2AF2P26368 475 aaKnown RBP eCLIP19.22■□□□□ 0.67
CCM2-205ENST00000472223 CCND2P30279 289 aa19.22■□□□□ 0.67
CCM2-205ENST00000472223 CNTN2Q02246 1040 aa19.22■□□□□ 0.67
CCM2-205ENST00000472223 PDE4DQ08499 809 aa19.22■□□□□ 0.67
CCM2-205ENST00000472223 XRRA1Q6P2D8 792 aa19.22■□□□□ 0.67
CCM2-205ENST00000472223 ZNF467Q7Z7K2 595 aaPredicted RBP19.22■□□□□ 0.67
CCM2-205ENST00000472223 RAET1EQ8TD07 263 aa19.22■□□□□ 0.67
CCM2-205ENST00000472223 APBA2Q99767 749 aa19.22■□□□□ 0.67
CCM2-205ENST00000472223 CHMP5Q9NZZ3 219 aa19.22■□□□□ 0.67
CCM2-205ENST00000472223 M0R2N6 131 aa19.21■□□□□ 0.67
CCM2-205ENST00000472223 MYCLP12524 364 aaPredicted RBP19.21■□□□□ 0.67
CCM2-205ENST00000472223 ALDH5A1P51649 535 aaPredicted RBP19.21■□□□□ 0.67
CCM2-205ENST00000472223 NPY5RQ15761 445 aa19.21■□□□□ 0.67
CCM2-205ENST00000472223 STXBP2Q15833 593 aa19.21■□□□□ 0.67
CCM2-205ENST00000472223 ZNF792Q3KQV3 632 aa19.21■□□□□ 0.67
CCM2-205ENST00000472223 FOXD4L5Q5VV16 416 aaPredicted RBP19.21■□□□□ 0.67
CCM2-205ENST00000472223 FERMT3Q86UX7 667 aa19.21■□□□□ 0.67
CCM2-205ENST00000472223 MSL3Q8N5Y2 521 aaKnown RBP19.21■□□□□ 0.67
CCM2-205ENST00000472223 TBCKQ8TEA7 893 aa19.21■□□□□ 0.67
CCM2-205ENST00000472223 FOXD4L4Q8WXT5 416 aaPredicted RBP19.21■□□□□ 0.67
CCM2-205ENST00000472223 SRRDQ9UH36 339 aa19.21■□□□□ 0.67
CCM2-205ENST00000472223 ZNF236Q9UL36 1845 aa19.21■□□□□ 0.67
CCM2-205ENST00000472223 PLXNA1Q9UIW2 1896 aa19.2■□□□□ 0.66
CCM2-205ENST00000472223 COBLO75128 1261 aa19.2■□□□□ 0.66
CCM2-205ENST00000472223 STAM2O75886 525 aa19.2■□□□□ 0.66
CCM2-205ENST00000472223 HOXC6P09630 235 aa19.2■□□□□ 0.66
CCM2-205ENST00000472223 XRCC5P13010 732 aaKnown RBP19.2■□□□□ 0.66
CCM2-205ENST00000472223 SREBF1P36956 1147 aa19.2■□□□□ 0.66
CCM2-205ENST00000472223 FLT3LGP49771 235 aa19.2■□□□□ 0.66
CCM2-205ENST00000472223 USP11P51784 963 aa19.2■□□□□ 0.66
CCM2-205ENST00000472223 RILPL1Q5EBL4 403 aa19.2■□□□□ 0.66
CCM2-205ENST00000472223 NEK8Q86SG6 692 aa19.2■□□□□ 0.66
CCM2-205ENST00000472223 PGBD1Q96JS3 809 aa19.2■□□□□ 0.66
CCM2-205ENST00000472223 COL20A1Q9P218 1284 aa19.2■□□□□ 0.66
CCM2-205ENST00000472223 GJD2Q9UKL4 321 aa19.2■□□□□ 0.66
CCM2-205ENST00000472223 TRIM17Q9Y577 477 aa19.2■□□□□ 0.66
CCM2-205ENST00000472223 DOCK3Q8IZD9 2030 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 SOWAHBA6NEL2 793 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 FOXN1O15353 648 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 F13A1P00488 732 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 NR3C2P08235 984 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 CTGFP29279 349 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 TRAPPC10P48553 1259 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 ARHGAP4P98171 946 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 PRKCZQ05513 592 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 PGM5Q15124 567 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 INF2Q27J81 1249 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 PCNX4Q63HM2 1172 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 MAML3Q96JK9 1138 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 PDCD2LQ9BRP1 358 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 CEP350Q5VT06 3117 aa19.19■□□□□ 0.66
CCM2-205ENST00000472223 BRD1O95696 1058 aa19.18■□□□□ 0.66
CCM2-205ENST00000472223 HSPA8P11142 646 aaKnown RBP19.18■□□□□ 0.66
CCM2-205ENST00000472223 ATP2B1P20020 1258 aa19.18■□□□□ 0.66
CCM2-205ENST00000472223 UBXN2AP68543 259 aa19.18■□□□□ 0.66
CCM2-205ENST00000472223 IRF5Q13568 498 aa19.18■□□□□ 0.66
CCM2-205ENST00000472223 LETM2Q2VYF4 491 aa19.18■□□□□ 0.66
CCM2-205ENST00000472223 GNPTABQ3T906 1256 aa19.18■□□□□ 0.66
CCM2-205ENST00000472223 MFSD14CQ5VZR4 134 aa19.18■□□□□ 0.66
CCM2-205ENST00000472223 NLRX1Q86UT6 975 aa19.18■□□□□ 0.66
CCM2-205ENST00000472223 USP6NLQ92738 828 aa19.18■□□□□ 0.66
CCM2-205ENST00000472223 TNFRSF25Q93038 417 aa19.18■□□□□ 0.66
CCM2-205ENST00000472223 ZNF396Q96N95 335 aaPredicted RBP19.18■□□□□ 0.66
CCM2-205ENST00000472223 PURBQ96QR8 312 aaKnown RBP19.18■□□□□ 0.66
CCM2-205ENST00000472223 GABRQQ9UN88 632 aa19.18■□□□□ 0.66
CCM2-205ENST00000472223 CNPY2Q9Y2B0 182 aa19.18■□□□□ 0.66
CCM2-205ENST00000472223 KIF28PB7ZC32 967 aa19.17■□□□□ 0.66
CCM2-205ENST00000472223 MARCH6O60337 910 aa19.17■□□□□ 0.66
CCM2-205ENST00000472223 CCNT1O60563 726 aaKnown RBP19.17■□□□□ 0.66
CCM2-205ENST00000472223 EIF3JO75822 258 aaKnown RBP19.17■□□□□ 0.66
CCM2-205ENST00000472223 GCFC2P16383 781 aaKnown RBP19.17■□□□□ 0.66
CCM2-205ENST00000472223 LBX1P52954 281 aa19.17■□□□□ 0.66
CCM2-205ENST00000472223 OLFML2BQ68BL8 750 aa19.17■□□□□ 0.66
CCM2-205ENST00000472223 NPLOC4Q8TAT6 608 aa19.17■□□□□ 0.66
CCM2-205ENST00000472223 TINF2Q9BSI4 451 aa19.17■□□□□ 0.66
CCM2-205ENST00000472223 RPTORQ8N122 1335 aa19.17■□□□□ 0.66
CCM2-205ENST00000472223 SYNGAP1Q96PV0 1343 aa19.17■□□□□ 0.66
CCM2-205ENST00000472223 ADAMTS3O15072 1205 aa19.16■□□□□ 0.66
CCM2-205ENST00000472223 CYP3A4P08684 503 aa19.16■□□□□ 0.66
CCM2-205ENST00000472223 RESTQ13127 1097 aa19.16■□□□□ 0.66
CCM2-205ENST00000472223 MAMDC4Q6UXC1 1216 aa19.16■□□□□ 0.66
CCM2-205ENST00000472223 VSIG10LQ86VR7 867 aa19.16■□□□□ 0.66
CCM2-205ENST00000472223 CDHR1Q96JP9 859 aa19.16■□□□□ 0.66
CCM2-205ENST00000472223 CEP131Q9UPN4 1083 aa19.16■□□□□ 0.66
CCM2-205ENST00000472223 FRMPD4Q14CM0 1322 aa19.16■□□□□ 0.66
CCM2-205ENST00000472223 PCNTO95613 3336 aa19.16■□□□□ 0.66
CCM2-205ENST00000472223 CASP8AP2Q9UKL3 1982 aa19.15■□□□□ 0.66
CCM2-205ENST00000472223 ADCY3O60266 1144 aa19.15■□□□□ 0.66
CCM2-205ENST00000472223 DDIT3P35638 169 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms