RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 CD320Q9NPF0 282 aa23.39■■□□□ 1.33
CCDC78-208ENST00000471861 GPHNQ9NQX3 736 aaPredicted RBP23.39■■□□□ 1.33
CCDC78-208ENST00000471861 FAM86C2PA6NEL3 165 aa23.38■■□□□ 1.33
CCDC78-208ENST00000471861 BAIAP3O94812 1187 aa23.38■■□□□ 1.33
CCDC78-208ENST00000471861 PPP2R5BQ15173 497 aa23.38■■□□□ 1.33
CCDC78-208ENST00000471861 SYDE2Q5VT97 1194 aa23.38■■□□□ 1.33
CCDC78-208ENST00000471861 GDPD5Q8WTR4 605 aa23.38■■□□□ 1.33
CCDC78-208ENST00000471861 DCTPP1Q9H773 170 aa23.38■■□□□ 1.33
CCDC78-208ENST00000471861 BRWD1Q9NSI6 2320 aa23.38■■□□□ 1.33
CCDC78-208ENST00000471861 FRMPD2Q68DX3 1309 aaPredicted RBP23.37■■□□□ 1.33
CCDC78-208ENST00000471861 ARIH2O95376 493 aa23.37■■□□□ 1.33
CCDC78-208ENST00000471861 CALML3P27482 149 aa23.37■■□□□ 1.33
CCDC78-208ENST00000471861 WDR5P61964 334 aaKnown RBP23.37■■□□□ 1.33
CCDC78-208ENST00000471861 PTPN11Q06124 597 aaPredicted RBP23.37■■□□□ 1.33
CCDC78-208ENST00000471861 RETREG2Q8NC44 543 aa23.37■■□□□ 1.33
CCDC78-208ENST00000471861 KIF28PB7ZC32 967 aa23.36■■□□□ 1.33
CCDC78-208ENST00000471861 NKRFO15226 690 aaKnown RBP eCLIP23.36■■□□□ 1.33
CCDC78-208ENST00000471861 DEFB103AP81534 67 aa23.36■■□□□ 1.33
CCDC78-208ENST00000471861 TCTN1Q2MV58 587 aa23.36■■□□□ 1.33
CCDC78-208ENST00000471861 OTUD7AQ8TE49 926 aaPredicted RBP23.36■■□□□ 1.33
CCDC78-208ENST00000471861 FSD1Q9BTV5 496 aa23.36■■□□□ 1.33
CCDC78-208ENST00000471861 RAD50Q92878 1312 aa23.35■■□□□ 1.33
CCDC78-208ENST00000471861 GPR37L1O60883 481 aa23.35■■□□□ 1.33
CCDC78-208ENST00000471861 RPS6P62753 249 aaKnown RBP23.35■■□□□ 1.33
CCDC78-208ENST00000471861 BFSP2Q13515 415 aa23.35■■□□□ 1.33
CCDC78-208ENST00000471861 LRRFIP1Q32MZ4 808 aaKnown RBP23.35■■□□□ 1.33
CCDC78-208ENST00000471861 SCFD2Q8WU76 684 aa23.35■■□□□ 1.33
CCDC78-208ENST00000471861 DHX38Q92620 1227 aaKnown RBP23.35■■□□□ 1.33
CCDC78-208ENST00000471861 GPCPD1Q9NPB8 672 aa23.35■■□□□ 1.33
CCDC78-208ENST00000471861 RANBP6O60518 1105 aaKnown RBP23.34■■□□□ 1.33
CCDC78-208ENST00000471861 PDE4DQ08499 809 aa23.34■■□□□ 1.33
CCDC78-208ENST00000471861 BRDTQ58F21 947 aaPredicted RBP23.34■■□□□ 1.33
CCDC78-208ENST00000471861 VPS53Q5VIR6 699 aa23.34■■□□□ 1.33
CCDC78-208ENST00000471861 RNF207Q6ZRF8 634 aa23.34■■□□□ 1.33
CCDC78-208ENST00000471861 ANAPC4Q9UJX5 808 aa23.34■■□□□ 1.33
CCDC78-208ENST00000471861 TTC41PQ6P2S7 1318 aa23.33■■□□□ 1.33
CCDC78-208ENST00000471861 TRIP12Q14669 1992 aaPredicted RBP23.33■■□□□ 1.33
CCDC78-208ENST00000471861 ORC4O43929 436 aa23.33■■□□□ 1.33
CCDC78-208ENST00000471861 KPNA6O60684 536 aa23.33■■□□□ 1.33
CCDC78-208ENST00000471861 FGRP09769 529 aa23.33■■□□□ 1.33
CCDC78-208ENST00000471861 TXNP10599 105 aaKnown RBP23.33■■□□□ 1.33
CCDC78-208ENST00000471861 KCNJ6P48051 423 aa23.33■■□□□ 1.33
CCDC78-208ENST00000471861 PTGISQ16647 500 aa23.33■■□□□ 1.33
CCDC78-208ENST00000471861 GDF6Q6KF10 455 aaPredicted RBP23.33■■□□□ 1.33
CCDC78-208ENST00000471861 TMEM47Q9BQJ4 181 aa23.33■■□□□ 1.33
CCDC78-208ENST00000471861 NOD1Q9Y239 953 aa23.33■■□□□ 1.33
CCDC78-208ENST00000471861 MIER1Q8N108 512 aa23.32■■□□□ 1.32
CCDC78-208ENST00000471861 CAGE1Q8TC20 777 aa23.32■■□□□ 1.32
CCDC78-208ENST00000471861 AFAP1L1Q8TED9 768 aa23.32■■□□□ 1.32
CCDC78-208ENST00000471861 PI4K2BG5E9Z4 385 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 NBNO60934 754 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 PDHBP11177 359 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 CHMP4BP1P59074 171 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 RBL2Q08999 1139 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 CCDC62Q6P9F0 684 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 SESTD1Q86VW0 696 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 DNERQ8NFT8 737 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 AFG1LQ8WV93 481 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 KAT2BQ92831 832 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 SUGCTQ9HAC7 445 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 LMCD1Q9NZU5 365 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 MTUS1Q9ULD2 1270 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 WDR19Q8NEZ3 1342 aa23.31■■□□□ 1.32
CCDC78-208ENST00000471861 CXCL10P02778 98 aa23.3■■□□□ 1.32
CCDC78-208ENST00000471861 MMP3P08254 477 aa23.3■■□□□ 1.32
CCDC78-208ENST00000471861 TOP1P11387 765 aaKnown RBP23.3■■□□□ 1.32
CCDC78-208ENST00000471861 LRRC8DQ7L1W4 858 aa23.3■■□□□ 1.32
CCDC78-208ENST00000471861 UBE2ZQ9H832 354 aaPredicted RBP23.3■■□□□ 1.32
CCDC78-208ENST00000471861 RCAN3Q9UKA8 241 aa23.3■■□□□ 1.32
CCDC78-208ENST00000471861 SIP14410 1827 aa23.29■■□□□ 1.32
CCDC78-208ENST00000471861 MUC6Q6W4X9 2439 aa23.29■■□□□ 1.32
CCDC78-208ENST00000471861 GJB5O95377 273 aa23.29■■□□□ 1.32
CCDC78-208ENST00000471861 SELPP16109 830 aa23.29■■□□□ 1.32
CCDC78-208ENST00000471861 ARHGAP1Q07960 439 aa23.29■■□□□ 1.32
CCDC78-208ENST00000471861 CNKSR3Q6P9H4 555 aa23.29■■□□□ 1.32
CCDC78-208ENST00000471861 CCDC155Q8N6L0 562 aa23.29■■□□□ 1.32
CCDC78-208ENST00000471861 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.28■■□□□ 1.32
CCDC78-208ENST00000471861 LINC01553A4QN01 128 aa23.28■■□□□ 1.32
CCDC78-208ENST00000471861 SNHG28P0DPA3 235 aa23.28■■□□□ 1.32
CCDC78-208ENST00000471861 ERVK-21P61565 698 aa23.28■■□□□ 1.32
CCDC78-208ENST00000471861 ZNF543Q08ER8 600 aa23.28■■□□□ 1.32
CCDC78-208ENST00000471861 TRAF7Q6Q0C0 670 aa23.28■■□□□ 1.32
CCDC78-208ENST00000471861 CKBP12277 381 aa23.27■■□□□ 1.32
CCDC78-208ENST00000471861 LY6KQ17RY6 165 aa23.27■■□□□ 1.32
CCDC78-208ENST00000471861 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.27■■□□□ 1.32
CCDC78-208ENST00000471861 WNT8BQ93098 351 aa23.27■■□□□ 1.32
CCDC78-208ENST00000471861 ZBED2Q9BTP6 218 aa23.27■■□□□ 1.32
CCDC78-208ENST00000471861 TCP11L1Q9NUJ3 509 aa23.27■■□□□ 1.32
CCDC78-208ENST00000471861 GTF2IRD1Q9UHL9 959 aa23.27■■□□□ 1.32
CCDC78-208ENST00000471861 PIEZO1Q92508 2521 aa23.27■■□□□ 1.32
CCDC78-208ENST00000471861 MBTPS1Q14703 1052 aa23.26■■□□□ 1.31
CCDC78-208ENST00000471861 RRP12Q5JTH9 1297 aaKnown RBP23.26■■□□□ 1.31
CCDC78-208ENST00000471861 FAM178BQ8IXR5 827 aa23.26■■□□□ 1.31
CCDC78-208ENST00000471861 TGS1Q96RS0 853 aaKnown RBP23.26■■□□□ 1.31
CCDC78-208ENST00000471861 MPHOSPH6Q99547 160 aaKnown RBP23.26■■□□□ 1.31
CCDC78-208ENST00000471861 RAD9AQ99638 391 aa23.26■■□□□ 1.31
CCDC78-208ENST00000471861 TOMM22Q9NS69 142 aa23.26■■□□□ 1.31
CCDC78-208ENST00000471861 COL20A1Q9P218 1284 aa23.26■■□□□ 1.31
CCDC78-208ENST00000471861 SALL3Q9BXA9 1300 aa23.26■■□□□ 1.31
CCDC78-208ENST00000471861 ALX1Q15699 326 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms