RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 ANKRD13CQ8N6S4 541 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 C4orf32Q8N8J7 132 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 FAM133AQ8N9E0 248 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 LINC00301Q8NCQ3 95 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 DNERQ8NFT8 737 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 CHAMP1Q96JM3 812 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 SCAND2PQ9GZW5 306 aaPredicted RBP11.85□□□□□ -0.51
THBS3-206ENST00000469769 NOL7Q9UMY1 257 aaKnown RBP11.85□□□□□ -0.51
THBS3-206ENST00000469769 ZNF236Q9UL36 1845 aa11.85□□□□□ -0.51
THBS3-206ENST00000469769 BMP15O95972 392 aa11.84□□□□□ -0.51
THBS3-206ENST00000469769 GCFC2P16383 781 aaKnown RBP11.84□□□□□ -0.51
THBS3-206ENST00000469769 ARHGAP4P98171 946 aa11.84□□□□□ -0.51
THBS3-206ENST00000469769 SLC39A14Q15043 492 aa11.84□□□□□ -0.51
THBS3-206ENST00000469769 INF2Q27J81 1249 aa11.84□□□□□ -0.51
THBS3-206ENST00000469769 TTC38Q5R3I4 469 aa11.84□□□□□ -0.51
THBS3-206ENST00000469769 XRRA1Q6P2D8 792 aa11.84□□□□□ -0.51
THBS3-206ENST00000469769 SLC30A10Q6XR72 485 aa11.84□□□□□ -0.51
THBS3-206ENST00000469769 NCAPG2Q86XI2 1143 aa11.84□□□□□ -0.51
THBS3-206ENST00000469769 LEO1Q8WVC0 666 aaPredicted RBP11.84□□□□□ -0.51
THBS3-206ENST00000469769 GBP4Q96PP9 640 aa11.84□□□□□ -0.51
THBS3-206ENST00000469769 HOMER2Q9NSB8 354 aa11.84□□□□□ -0.51
THBS3-206ENST00000469769 PCDHB6Q9Y5E3 794 aa11.84□□□□□ -0.51
THBS3-206ENST00000469769 CLIC4Q9Y696 253 aa11.84□□□□□ -0.51
THBS3-206ENST00000469769 PPP6R2O75170 966 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 EDNRBP24530 442 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 MAPK4P31152 587 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 ATP2C1P98194 919 aaPredicted RBP11.83□□□□□ -0.52
THBS3-206ENST00000469769 GRB14Q14449 540 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 SF3A1Q15459 793 aaKnown RBP11.83□□□□□ -0.52
THBS3-206ENST00000469769 PCNX4Q63HM2 1172 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 PAXIP1Q6ZW49 1069 aaPredicted RBP11.83□□□□□ -0.52
THBS3-206ENST00000469769 LENG9Q96B70 501 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 FGD4Q96M96 766 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 TAAR1Q96RJ0 339 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 NAP1L4Q99733 375 aaKnown RBP11.83□□□□□ -0.52
THBS3-206ENST00000469769 FTOQ9C0B1 505 aaKnown RBP eCLIP11.83□□□□□ -0.52
THBS3-206ENST00000469769 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 PXMP2Q9NR77 195 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 TFIP11Q9UBB9 837 aaKnown RBP11.83□□□□□ -0.52
THBS3-206ENST00000469769 CPA4Q9UI42 421 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 CNPY2Q9Y2B0 182 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 PLXNB2O15031 1838 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 ASTN1O14525 1302 aa11.83□□□□□ -0.52
THBS3-206ENST00000469769 IGLV3-22A0A075B6J6 115 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 LAD1O00515 517 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 HSPA1AP0DMV8 641 aaKnown RBP11.82□□□□□ -0.52
THBS3-206ENST00000469769 HSPA1BP0DMV9 641 aaKnown RBP11.82□□□□□ -0.52
THBS3-206ENST00000469769 FCER1AP12319 257 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 PTPREP23469 700 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 MCM4P33991 863 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 NBR1Q14596 966 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 Q4G0T1 1027 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 ARL6IP4Q66PJ3 421 aaKnown RBP11.82□□□□□ -0.52
THBS3-206ENST00000469769 NSMFQ6X4W1 530 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 NIPA1Q7RTP0 329 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 GPR142Q7Z601 462 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 VSIG10LQ86VR7 867 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 FCHSD1Q86WN1 690 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 ANKRD35Q8N283 1001 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 KCNG4Q8TDN1 519 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 MORC4Q8TE76 937 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 NSUN6Q8TEA1 469 aaKnown RBP11.82□□□□□ -0.52
THBS3-206ENST00000469769 PGBD1Q96JS3 809 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 MTMR9Q96QG7 549 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 IWS1Q96ST2 819 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 RMDN3Q96TC7 470 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 PDCD2LQ9BRP1 358 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 EHMT1Q9H9B1 1298 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 CEP131Q9UPN4 1083 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 DIS3Q9Y2L1 958 aaKnown RBP11.82□□□□□ -0.52
THBS3-206ENST00000469769 MGAMO43451 1857 aa11.82□□□□□ -0.52
THBS3-206ENST00000469769 PLXNA1Q9UIW2 1896 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 SOWAHBA6NEL2 793 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 MEIS1O00470 390 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 STAM2O75886 525 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 IGHA2P01877 340 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 HOXC6P09630 235 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 PRPHP41219 470 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 MRPS9P82933 396 aaKnown RBP11.81□□□□□ -0.52
THBS3-206ENST00000469769 PTGDRQ13258 359 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 PGM5Q15124 567 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 ZNF174Q15697 407 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 CSPP1Q1MSJ5 1256 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 LETM2Q2VYF4 491 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 ZNF792Q3KQV3 632 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 FOXD4L6Q3SYB3 417 aaPredicted RBP11.81□□□□□ -0.52
THBS3-206ENST00000469769 MORN1Q5T089 497 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 FOXD4L3Q6VB84 417 aaPredicted RBP11.81□□□□□ -0.52
THBS3-206ENST00000469769 ZNF467Q7Z7K2 595 aaPredicted RBP11.81□□□□□ -0.52
THBS3-206ENST00000469769 USP6NLQ92738 828 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 PURBQ96QR8 312 aaKnown RBP11.81□□□□□ -0.52
THBS3-206ENST00000469769 MMP19Q99542 508 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 KCNMB3Q9NPA1 279 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 LMBRD1Q9NUN5 540 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 RNF186Q9NXI6 227 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 SAGE1Q9NXZ1 904 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 UBIAD1Q9Y5Z9 338 aa11.81□□□□□ -0.52
THBS3-206ENST00000469769 SLC15A5A6NIM6 579 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 FAM86B1E9PN63 330 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 POTEB2H3BUK9 544 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms