RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 ALDH5A1P51649 535 aaPredicted RBP26.27■■□□□ 1.8
SREBF1-208ENST00000469356 IFFO2Q5TF58 517 aa26.27■■□□□ 1.8
SREBF1-208ENST00000469356 KRT40Q6A162 431 aa26.27■■□□□ 1.8
SREBF1-208ENST00000469356 TAAR1Q96RJ0 339 aa26.27■■□□□ 1.8
SREBF1-208ENST00000469356 TINF2Q9BSI4 451 aa26.27■■□□□ 1.8
SREBF1-208ENST00000469356 BIN2Q9UBW5 565 aaPredicted RBP26.27■■□□□ 1.8
SREBF1-208ENST00000469356 KCNJ14Q9UNX9 436 aa26.27■■□□□ 1.8
SREBF1-208ENST00000469356 PTCH2Q9Y6C5 1203 aa26.27■■□□□ 1.8
SREBF1-208ENST00000469356 SYNGAP1Q96PV0 1343 aa26.27■■□□□ 1.8
SREBF1-208ENST00000469356 SOWAHBA6NEL2 793 aa26.26■■□□□ 1.79
SREBF1-208ENST00000469356 DTNBO60941 627 aa26.26■■□□□ 1.79
SREBF1-208ENST00000469356 HMGCRP04035 888 aa26.26■■□□□ 1.79
SREBF1-208ENST00000469356 KRT2P35908 639 aa26.26■■□□□ 1.79
SREBF1-208ENST00000469356 UBE2SQ16763 222 aa26.26■■□□□ 1.79
SREBF1-208ENST00000469356 LARP1BQ659C4 914 aaKnown RBP26.26■■□□□ 1.79
SREBF1-208ENST00000469356 MAMDC4Q6UXC1 1216 aa26.26■■□□□ 1.79
SREBF1-208ENST00000469356 FBXO18Q8NFZ0 1043 aa26.26■■□□□ 1.79
SREBF1-208ENST00000469356 PXMP2Q9NR77 195 aa26.26■■□□□ 1.79
SREBF1-208ENST00000469356 PCDHA6Q9UN73 950 aa26.26■■□□□ 1.79
SREBF1-208ENST00000469356 PCDHA8Q9Y5H6 950 aa26.26■■□□□ 1.79
SREBF1-208ENST00000469356 MMP1P03956 469 aa26.25■■□□□ 1.79
SREBF1-208ENST00000469356 CLK2P49760 499 aaKnown RBP26.25■■□□□ 1.79
SREBF1-208ENST00000469356 UBXN2AP68543 259 aa26.25■■□□□ 1.79
SREBF1-208ENST00000469356 PDE4DQ08499 809 aa26.25■■□□□ 1.79
SREBF1-208ENST00000469356 GNL2Q13823 731 aaKnown RBP26.25■■□□□ 1.79
SREBF1-208ENST00000469356 XRRA1Q6P2D8 792 aa26.25■■□□□ 1.79
SREBF1-208ENST00000469356 CNPY2Q9Y2B0 182 aa26.25■■□□□ 1.79
SREBF1-208ENST00000469356 FOSBP53539 338 aa26.24■■□□□ 1.79
SREBF1-208ENST00000469356 SLC9C1Q4G0N8 1177 aa26.24■■□□□ 1.79
SREBF1-208ENST00000469356 JAKMIP3Q5VZ66 844 aa26.24■■□□□ 1.79
SREBF1-208ENST00000469356 KRT25Q7Z3Z0 450 aa26.24■■□□□ 1.79
SREBF1-208ENST00000469356 COL20A1Q9P218 1284 aa26.24■■□□□ 1.79
SREBF1-208ENST00000469356 NRBP1Q9UHY1 535 aa26.24■■□□□ 1.79
SREBF1-208ENST00000469356 EIF2AK2P19525 551 aaKnown RBP26.23■■□□□ 1.79
SREBF1-208ENST00000469356 CCND2P30279 289 aa26.23■■□□□ 1.79
SREBF1-208ENST00000469356 STXBP2Q15833 593 aa26.23■■□□□ 1.79
SREBF1-208ENST00000469356 ANO3Q9BYT9 981 aa26.23■■□□□ 1.79
SREBF1-208ENST00000469356 FOXD4L1Q9NU39 408 aa26.23■■□□□ 1.79
SREBF1-208ENST00000469356 CCDC194A0A1B0GVG4 234 aa26.22■■□□□ 1.79
SREBF1-208ENST00000469356 STAM2O75886 525 aa26.22■■□□□ 1.79
SREBF1-208ENST00000469356 NR3C2P08235 984 aa26.22■■□□□ 1.79
SREBF1-208ENST00000469356 CCL14Q16627 93 aa26.22■■□□□ 1.79
SREBF1-208ENST00000469356 ARMCX2Q7L311 632 aa26.22■■□□□ 1.79
SREBF1-208ENST00000469356 MORC4Q8TE76 937 aa26.22■■□□□ 1.79
SREBF1-208ENST00000469356 TRIB2Q92519 343 aa26.22■■□□□ 1.79
SREBF1-208ENST00000469356 PDCD2LQ9BRP1 358 aa26.22■■□□□ 1.79
SREBF1-208ENST00000469356 ABHD16BQ9H3Z7 469 aa26.22■■□□□ 1.79
SREBF1-208ENST00000469356 LCTP09848 1927 aa26.21■■□□□ 1.79
SREBF1-208ENST00000469356 ELNP15502 786 aa26.21■■□□□ 1.79
SREBF1-208ENST00000469356 GUCY1B3Q02153 619 aa26.21■■□□□ 1.79
SREBF1-208ENST00000469356 PGM5Q15124 567 aa26.21■■□□□ 1.79
SREBF1-208ENST00000469356 DIS3L2Q8IYB7 885 aaKnown RBP26.21■■□□□ 1.79
SREBF1-208ENST00000469356 SHISA4Q96DD7 197 aa26.21■■□□□ 1.79
SREBF1-208ENST00000469356 FGD4Q96M96 766 aa26.21■■□□□ 1.79
SREBF1-208ENST00000469356 PURBQ96QR8 312 aaKnown RBP26.21■■□□□ 1.79
SREBF1-208ENST00000469356 GJB4Q9NTQ9 266 aa26.21■■□□□ 1.79
SREBF1-208ENST00000469356 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.21■■□□□ 1.79
SREBF1-208ENST00000469356 FRMPD4Q14CM0 1322 aa26.2■■□□□ 1.79
SREBF1-208ENST00000469356 MYCLP12524 364 aaPredicted RBP26.2■■□□□ 1.79
SREBF1-208ENST00000469356 EDNRBP24530 442 aa26.2■■□□□ 1.79
SREBF1-208ENST00000469356 NONOQ15233 471 aaKnown RBP eCLIP26.2■■□□□ 1.79
SREBF1-208ENST00000469356 FOXP1Q9H334 677 aaPredicted RBP26.2■■□□□ 1.79
SREBF1-208ENST00000469356 VTA1Q9NP79 307 aa26.2■■□□□ 1.79
SREBF1-208ENST00000469356 TMEM260Q9NX78 707 aa26.2■■□□□ 1.79
SREBF1-208ENST00000469356 FLRT1Q9NZU1 646 aa26.2■■□□□ 1.79
SREBF1-208ENST00000469356 RPTORQ8N122 1335 aa26.2■■□□□ 1.78
SREBF1-208ENST00000469356 EIF3JO75822 258 aaKnown RBP26.19■■□□□ 1.78
SREBF1-208ENST00000469356 CYP2C19P33261 490 aa26.19■■□□□ 1.78
SREBF1-208ENST00000469356 PCNX4Q63HM2 1172 aa26.19■■□□□ 1.78
SREBF1-208ENST00000469356 MCM3APO60318 1980 aa26.19■■□□□ 1.78
SREBF1-208ENST00000469356 ZNF76P36508 570 aa26.18■■□□□ 1.78
SREBF1-208ENST00000469356 SREBF1P36956 1147 aa26.18■■□□□ 1.78
SREBF1-208ENST00000469356 NPY5RQ15761 445 aa26.18■■□□□ 1.78
SREBF1-208ENST00000469356 GNPTABQ3T906 1256 aa26.18■■□□□ 1.78
SREBF1-208ENST00000469356 VSIG10LQ86VR7 867 aa26.18■■□□□ 1.78
SREBF1-208ENST00000469356 RASGRP4Q8TDF6 673 aa26.18■■□□□ 1.78
SREBF1-208ENST00000469356 NAP1L4Q99733 375 aaKnown RBP26.18■■□□□ 1.78
SREBF1-208ENST00000469356 M0R2N6 131 aa26.17■■□□□ 1.78
SREBF1-208ENST00000469356 INHAP05111 366 aa26.17■■□□□ 1.78
SREBF1-208ENST00000469356 ACVR2BQ13705 512 aa26.17■■□□□ 1.78
SREBF1-208ENST00000469356 MCTP1Q6DN14 999 aa26.17■■□□□ 1.78
SREBF1-208ENST00000469356 NLRX1Q86UT6 975 aa26.17■■□□□ 1.78
SREBF1-208ENST00000469356 SPRYD3Q8NCJ5 442 aa26.17■■□□□ 1.78
SREBF1-208ENST00000469356 MCOLN1Q9GZU1 580 aa26.17■■□□□ 1.78
SREBF1-208ENST00000469356 ASTN1O14525 1302 aa26.17■■□□□ 1.78
SREBF1-208ENST00000469356 BTBD18B2RXH4 712 aa26.16■■□□□ 1.78
SREBF1-208ENST00000469356 SNAI1O95863 264 aaPredicted RBP26.16■■□□□ 1.78
SREBF1-208ENST00000469356 USP11P51784 963 aa26.16■■□□□ 1.78
SREBF1-208ENST00000469356 ARHGAP4P98171 946 aa26.16■■□□□ 1.78
SREBF1-208ENST00000469356 KCNV1Q6PIU1 500 aa26.16■■□□□ 1.78
SREBF1-208ENST00000469356 HMX1Q9NP08 348 aaPredicted RBP26.16■■□□□ 1.78
SREBF1-208ENST00000469356 ZHX1Q9UKY1 873 aaPredicted RBP26.16■■□□□ 1.78
SREBF1-208ENST00000469356 VPS37CA5D8V6 355 aaPredicted RBP26.15■■□□□ 1.78
SREBF1-208ENST00000469356 IGHA2P01877 340 aa26.15■■□□□ 1.78
SREBF1-208ENST00000469356 CYP3A4P08684 503 aa26.15■■□□□ 1.78
SREBF1-208ENST00000469356 PRKAR2AP13861 404 aaKnown RBP26.15■■□□□ 1.78
SREBF1-208ENST00000469356 CACNB2Q08289 660 aaPredicted RBP26.15■■□□□ 1.78
SREBF1-208ENST00000469356 SH3TC2Q8TF17 1288 aa26.15■■□□□ 1.78
SREBF1-208ENST00000469356 CDHR1Q96JP9 859 aa26.15■■□□□ 1.78
SREBF1-208ENST00000469356 PGBD1Q96JS3 809 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms