RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 CPVLQ9H3G5 476 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 CCDC171Q6TFL3 1326 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 LRRC37A2A6NM11 1700 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 TRIM6-TRIM34B2RNG4 842 aa14.37□□□□□ -0.11
COL5A1-207ENST00000469093 B4DLN1 442 aa14.37□□□□□ -0.11
COL5A1-207ENST00000469093 ARIH2O95376 493 aa14.37□□□□□ -0.11
COL5A1-207ENST00000469093 IQCF3P0C7M6 154 aa14.37□□□□□ -0.11
COL5A1-207ENST00000469093 MRPL12P52815 198 aaKnown RBP14.37□□□□□ -0.11
COL5A1-207ENST00000469093 USH1GQ495M9 461 aa14.37□□□□□ -0.11
COL5A1-207ENST00000469093 TMEM67Q5HYA8 995 aa14.37□□□□□ -0.11
COL5A1-207ENST00000469093 GPATCH4Q5T3I0 446 aaKnown RBP14.37□□□□□ -0.11
COL5A1-207ENST00000469093 CCDC62Q6P9F0 684 aa14.37□□□□□ -0.11
COL5A1-207ENST00000469093 RILPL2Q969X0 211 aa14.37□□□□□ -0.11
COL5A1-207ENST00000469093 PRRC2BQ5JSZ5 2229 aaKnown RBP14.36□□□□□ -0.11
COL5A1-207ENST00000469093 SDSP20132 328 aa14.36□□□□□ -0.11
COL5A1-207ENST00000469093 RFC2P35250 354 aa14.36□□□□□ -0.11
COL5A1-207ENST00000469093 PTPN11Q06124 597 aaPredicted RBP14.36□□□□□ -0.11
COL5A1-207ENST00000469093 RETREG2Q8NC44 543 aa14.36□□□□□ -0.11
COL5A1-207ENST00000469093 ADAMTS19Q8TE59 1207 aa14.36□□□□□ -0.11
COL5A1-207ENST00000469093 ESR2Q92731 530 aa14.36□□□□□ -0.11
COL5A1-207ENST00000469093 LNPKQ9C0E8 428 aa14.36□□□□□ -0.11
COL5A1-207ENST00000469093 RNF41Q9H4P4 317 aaPredicted RBP14.36□□□□□ -0.11
COL5A1-207ENST00000469093 SCN10AQ9Y5Y9 1956 aa14.36□□□□□ -0.11
COL5A1-207ENST00000469093 RAD50Q92878 1312 aa14.36□□□□□ -0.11
COL5A1-207ENST00000469093 RFXAPO00287 272 aa14.35□□□□□ -0.11
COL5A1-207ENST00000469093 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
COL5A1-207ENST00000469093 ZNF213O14771 459 aa14.35□□□□□ -0.11
COL5A1-207ENST00000469093 CA3P07451 260 aa14.35□□□□□ -0.11
COL5A1-207ENST00000469093 ACTN1P12814 892 aa14.35□□□□□ -0.11
COL5A1-207ENST00000469093 POU3F3P20264 500 aaPredicted RBP14.35□□□□□ -0.11
COL5A1-207ENST00000469093 PHOSPHO2Q8TCD6 241 aa14.35□□□□□ -0.11
COL5A1-207ENST00000469093 SYTL5Q8TDW5 730 aaPredicted RBP14.35□□□□□ -0.11
COL5A1-207ENST00000469093 AFG1LQ8WV93 481 aa14.35□□□□□ -0.11
COL5A1-207ENST00000469093 ANKS1AQ92625 1134 aa14.35□□□□□ -0.11
COL5A1-207ENST00000469093 TAAR1Q96RJ0 339 aa14.35□□□□□ -0.11
COL5A1-207ENST00000469093 NEDD4P46934 1319 aa14.35□□□□□ -0.11
COL5A1-207ENST00000469093 MFAP1P55081 439 aaKnown RBP14.34□□□□□ -0.11
COL5A1-207ENST00000469093 BFSP2Q13515 415 aa14.34□□□□□ -0.11
COL5A1-207ENST00000469093 GPNMBQ14956 572 aa14.34□□□□□ -0.11
COL5A1-207ENST00000469093 CDC37Q16543 378 aaPredicted RBP14.34□□□□□ -0.11
COL5A1-207ENST00000469093 PTGISQ16647 500 aa14.34□□□□□ -0.11
COL5A1-207ENST00000469093 LY6KQ17RY6 165 aa14.34□□□□□ -0.11
COL5A1-207ENST00000469093 SEPT14Q6ZU15 432 aa14.34□□□□□ -0.11
COL5A1-207ENST00000469093 ADGRF4Q8IZF3 695 aa14.34□□□□□ -0.11
COL5A1-207ENST00000469093 PNMA1Q8ND90 353 aa14.34□□□□□ -0.11
COL5A1-207ENST00000469093 NSUN6Q8TEA1 469 aaKnown RBP14.34□□□□□ -0.11
COL5A1-207ENST00000469093 CTAGE1Q96RT6 745 aa14.34□□□□□ -0.11
COL5A1-207ENST00000469093 SLC9A7Q96T83 725 aa14.34□□□□□ -0.11
COL5A1-207ENST00000469093 FTOQ9C0B1 505 aaKnown RBP eCLIP14.34□□□□□ -0.11
COL5A1-207ENST00000469093 MAF1Q9H063 256 aa14.34□□□□□ -0.11
COL5A1-207ENST00000469093 TSPYL2Q9H2G4 693 aaPredicted RBP14.34□□□□□ -0.11
COL5A1-207ENST00000469093 CERS4Q9HA82 394 aa14.34□□□□□ -0.11
COL5A1-207ENST00000469093 COL20A1Q9P218 1284 aa14.34□□□□□ -0.11
COL5A1-207ENST00000469093 CHD7Q9P2D1 2997 aa14.34□□□□□ -0.11
COL5A1-207ENST00000469093 GBF1Q92538 1859 aa14.33□□□□□ -0.11
COL5A1-207ENST00000469093 KDM4AO75164 1064 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 BMP1P13497 986 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 NT5C2P49902 561 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 CHMP4BP1P59074 171 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 ARHGAP1Q07960 439 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 CCDC178Q5BJE1 867 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 B4GALNT3Q6L9W6 998 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 CWC27Q6UX04 472 aaKnown RBP14.33□□□□□ -0.12
COL5A1-207ENST00000469093 SESTD1Q86VW0 696 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 IQCA1Q86XH1 822 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 PLEKHM2Q8IWE5 1019 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 SMC5Q8IY18 1101 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 MICALL1Q8N3F8 863 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 KAT2BQ92831 832 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 ZSCAN10Q96SZ4 725 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-207ENST00000469093 UHRF1Q96T88 793 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-207ENST00000469093 ZSWIM5Q9P217 1185 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 NOD1Q9Y239 953 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 MTCH2Q9Y6C9 303 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 ABCB11O95342 1321 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 TET1Q8NFU7 2136 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 MUC3AQ02505 3323 aa14.33□□□□□ -0.12
COL5A1-207ENST00000469093 SCN5AQ14524 2016 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 EPOPA6NHQ4 379 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 B4E1Z4 1266 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 ARHGEF15O94989 841 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 GH1P01241 217 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 MMP3P08254 477 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 TFF2Q03403 129 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 TAP1Q03518 808 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 STXBP2Q15833 593 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 QRICH1Q2TAL8 776 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 GDF6Q6KF10 455 aaPredicted RBP14.32□□□□□ -0.12
COL5A1-207ENST00000469093 MCF2L2Q86YR7 1114 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 HERC6Q8IVU3 1022 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 IWS1Q96ST2 819 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 RMDN3Q96TC7 470 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 OSBPL3Q9H4L5 887 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 KAT14Q9H8E8 782 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 VAT1LQ9HCJ6 419 aa14.32□□□□□ -0.12
COL5A1-207ENST00000469093 DDX41Q9UJV9 622 aaKnown RBP14.32□□□□□ -0.12
COL5A1-207ENST00000469093 KIF28PB7ZC32 967 aa14.31□□□□□ -0.12
COL5A1-207ENST00000469093 CASTP20810 708 aaKnown RBP14.31□□□□□ -0.12
COL5A1-207ENST00000469093 COL9A1P20849 921 aa14.31□□□□□ -0.12
COL5A1-207ENST00000469093 ASPRV1Q53RT3 343 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms