RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 DPF3Q92784 378 aa12.99□□□□□ -0.33
COL4A6-205ENST00000468338 TMEM87BQ96K49 555 aa12.99□□□□□ -0.33
COL4A6-205ENST00000468338 RIOX1Q9H6W3 641 aa12.99□□□□□ -0.33
COL4A6-205ENST00000468338 H0YGN5 161 aa12.98□□□□□ -0.33
COL4A6-205ENST00000468338 SH2B2O14492 632 aaPredicted RBP12.98□□□□□ -0.33
COL4A6-205ENST00000468338 PRC1O43663 620 aa12.98□□□□□ -0.33
COL4A6-205ENST00000468338 CYTH3O43739 400 aa12.98□□□□□ -0.33
COL4A6-205ENST00000468338 ADAMTS4O75173 837 aa12.98□□□□□ -0.33
COL4A6-205ENST00000468338 RARBP10826 455 aa12.98□□□□□ -0.33
COL4A6-205ENST00000468338 RPS6P62753 249 aaKnown RBP12.98□□□□□ -0.33
COL4A6-205ENST00000468338 NKX3-2P78367 333 aa12.98□□□□□ -0.33
COL4A6-205ENST00000468338 GHRHRQ02643 423 aa12.98□□□□□ -0.33
COL4A6-205ENST00000468338 LRRC41Q15345 812 aa12.98□□□□□ -0.33
COL4A6-205ENST00000468338 ANO1Q5XXA6 986 aa12.98□□□□□ -0.33
COL4A6-205ENST00000468338 NSMFQ6X4W1 530 aa12.98□□□□□ -0.33
COL4A6-205ENST00000468338 TMTC2Q8N394 836 aa12.98□□□□□ -0.33
COL4A6-205ENST00000468338 NLRP7Q8WX94 980 aa12.98□□□□□ -0.33
COL4A6-205ENST00000468338 FAM184BQ9ULE4 1060 aa12.98□□□□□ -0.33
COL4A6-205ENST00000468338 ABCB11O95342 1321 aa12.97□□□□□ -0.33
COL4A6-205ENST00000468338 EPB41L2O43491 1005 aaKnown RBP12.97□□□□□ -0.33
COL4A6-205ENST00000468338 DUSP11O75319 330 aaKnown RBP12.97□□□□□ -0.33
COL4A6-205ENST00000468338 DDAH1O94760 285 aa12.97□□□□□ -0.33
COL4A6-205ENST00000468338 SMARCA1P28370 1054 aa12.97□□□□□ -0.33
COL4A6-205ENST00000468338 EXOSC10Q01780 885 aaKnown RBP12.97□□□□□ -0.33
COL4A6-205ENST00000468338 RNF207Q6ZRF8 634 aa12.97□□□□□ -0.33
COL4A6-205ENST00000468338 CATIPQ7Z7H3 387 aa12.97□□□□□ -0.33
COL4A6-205ENST00000468338 SGMS1Q86VZ5 419 aa12.97□□□□□ -0.33
COL4A6-205ENST00000468338 ZNF654Q8IZM8 581 aa12.97□□□□□ -0.33
COL4A6-205ENST00000468338 KLHDC9Q8NEP7 349 aa12.97□□□□□ -0.33
COL4A6-205ENST00000468338 PURBQ96QR8 312 aaKnown RBP12.97□□□□□ -0.33
COL4A6-205ENST00000468338 NR2E3Q9Y5X4 410 aa12.97□□□□□ -0.33
COL4A6-205ENST00000468338 ZBTB5O15062 677 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 ADCY6O43306 1168 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 PPP1R11O60927 126 aaPredicted RBP12.96□□□□□ -0.33
COL4A6-205ENST00000468338 EDNRBP24530 442 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 HSPA4P34932 840 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 PRSS12P56730 875 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 SNX17Q15036 470 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 ADCK5Q3MIX3 580 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 CCDC144BQ3MJ40 725 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 GJC2Q5T442 439 aaPredicted RBP12.96□□□□□ -0.33
COL4A6-205ENST00000468338 C1orf53Q5VUE5 145 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 MYSM1Q5VVJ2 828 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 CCSAPQ6IQ19 270 aaPredicted RBP12.96□□□□□ -0.33
COL4A6-205ENST00000468338 TAPT1Q6NXT6 567 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 SLC30A10Q6XR72 485 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 FBXO11Q86XK2 927 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 TTC13Q8NBP0 860 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 DNERQ8NFT8 737 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 TBC1D5Q92609 795 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 NEK1Q96PY6 1258 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 AMNQ9BXJ7 453 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 UPF3AQ9H1J1 476 aaKnown RBP12.96□□□□□ -0.33
COL4A6-205ENST00000468338 VAT1LQ9HCJ6 419 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 XPNPEP3Q9NQH7 507 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 ADD3Q9UEY8 706 aaKnown RBP12.96□□□□□ -0.33
COL4A6-205ENST00000468338 ZHX1Q9UKY1 873 aaPredicted RBP12.96□□□□□ -0.33
COL4A6-205ENST00000468338 PHF24Q9UPV7 400 aa12.96□□□□□ -0.33
COL4A6-205ENST00000468338 LRRC37A2A6NM11 1700 aa12.96□□□□□ -0.34
COL4A6-205ENST00000468338 PTPDC1A2A3K4 754 aa12.95□□□□□ -0.34
COL4A6-205ENST00000468338 OPLAHO14841 1288 aa12.95□□□□□ -0.34
COL4A6-205ENST00000468338 PGK1P00558 417 aa12.95□□□□□ -0.34
COL4A6-205ENST00000468338 CST5P28325 142 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-205ENST00000468338 CLK2P49760 499 aaKnown RBP12.95□□□□□ -0.34
COL4A6-205ENST00000468338 ALDH5A1P51649 535 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-205ENST00000468338 KRT32Q14532 448 aa12.95□□□□□ -0.34
COL4A6-205ENST00000468338 LRRC26Q2I0M4 334 aa12.95□□□□□ -0.34
COL4A6-205ENST00000468338 USH1GQ495M9 461 aa12.95□□□□□ -0.34
COL4A6-205ENST00000468338 DHX32Q7L7V1 743 aaKnown RBP12.95□□□□□ -0.34
COL4A6-205ENST00000468338 LENG1Q96BZ8 264 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-205ENST00000468338 TSEN34Q9BSV6 310 aaKnown RBP12.95□□□□□ -0.34
COL4A6-205ENST00000468338 SPZ1Q9BXG8 430 aa12.95□□□□□ -0.34
COL4A6-205ENST00000468338 SENP6Q9GZR1 1112 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-205ENST00000468338 PRO3102Q9H379 93 aa12.95□□□□□ -0.34
COL4A6-205ENST00000468338 VTA1Q9NP79 307 aa12.95□□□□□ -0.34
COL4A6-205ENST00000468338 GNEQ9Y223 722 aaKnown RBP12.95□□□□□ -0.34
COL4A6-205ENST00000468338 MRPL11Q9Y3B7 192 aaKnown RBP12.95□□□□□ -0.34
COL4A6-205ENST00000468338 DDX49Q9Y6V7 483 aaKnown RBP12.95□□□□□ -0.34
COL4A6-205ENST00000468338 SYNRGQ9UMZ2 1314 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 RBM47A0AV96 593 aaKnown RBP12.94□□□□□ -0.34
COL4A6-205ENST00000468338 KBTBD13C9JR72 458 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 CTAGE5O15320 804 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 REC8O95072 547 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 GJA9P57773 515 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 IQSEC1Q6DN90 963 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 RNF180Q86T96 592 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 MCF2L2Q86YR7 1114 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 SAMD3Q8N6K7 520 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 SYTL5Q8TDW5 730 aaPredicted RBP12.94□□□□□ -0.34
COL4A6-205ENST00000468338 PIGSQ96S52 555 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 MYL10Q9BUA6 226 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 MAP3K20Q9NYL2 800 aaKnown RBP12.94□□□□□ -0.34
COL4A6-205ENST00000468338 COL20A1Q9P218 1284 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 Q9Y3F1 56 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 TRIOBPQ9H2D6 2365 aa12.94□□□□□ -0.34
COL4A6-205ENST00000468338 PNMA6FA0A0J9YX94 578 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.93□□□□□ -0.34
COL4A6-205ENST00000468338 DHX16O60231 1041 aaKnown RBP12.93□□□□□ -0.34
COL4A6-205ENST00000468338 CALM1P0DP23 149 aa12.93□□□□□ -0.34
COL4A6-205ENST00000468338 CALM2P0DP24 149 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms