RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 MSL3Q8N5Y2 521 aaKnown RBP17.4■□□□□ 0.38
SNIP1-202ENST00000468040 FOXP1Q9H334 677 aaPredicted RBP17.4■□□□□ 0.38
SNIP1-202ENST00000468040 BIN2Q9UBW5 565 aaPredicted RBP17.4■□□□□ 0.38
SNIP1-202ENST00000468040 PCDHA6Q9UN73 950 aa17.4■□□□□ 0.38
SNIP1-202ENST00000468040 GABRQQ9UN88 632 aa17.4■□□□□ 0.38
SNIP1-202ENST00000468040 PCDHA8Q9Y5H6 950 aa17.4■□□□□ 0.38
SNIP1-202ENST00000468040 ZNFX1Q9P2E3 1918 aaKnown RBP17.4■□□□□ 0.38
SNIP1-202ENST00000468040 CASP8AP2Q9UKL3 1982 aa17.4■□□□□ 0.38
SNIP1-202ENST00000468040 SOWAHBA6NEL2 793 aa17.39■□□□□ 0.37
SNIP1-202ENST00000468040 ALDH5A1P51649 535 aaPredicted RBP17.39■□□□□ 0.37
SNIP1-202ENST00000468040 GNL2Q13823 731 aaKnown RBP17.39■□□□□ 0.37
SNIP1-202ENST00000468040 ARHGEF16Q5VV41 709 aa17.39■□□□□ 0.37
SNIP1-202ENST00000468040 JAKMIP3Q5VZ66 844 aa17.39■□□□□ 0.37
SNIP1-202ENST00000468040 KRT25Q7Z3Z0 450 aa17.39■□□□□ 0.37
SNIP1-202ENST00000468040 TRMT44Q8IYL2 757 aaKnown RBP17.39■□□□□ 0.37
SNIP1-202ENST00000468040 MAML3Q96JK9 1138 aa17.39■□□□□ 0.37
SNIP1-202ENST00000468040 PURBQ96QR8 312 aaKnown RBP17.39■□□□□ 0.37
SNIP1-202ENST00000468040 TAAR1Q96RJ0 339 aa17.39■□□□□ 0.37
SNIP1-202ENST00000468040 IWS1Q96ST2 819 aa17.39■□□□□ 0.37
SNIP1-202ENST00000468040 ANO3Q9BYT9 981 aa17.39■□□□□ 0.37
SNIP1-202ENST00000468040 PXMP2Q9NR77 195 aa17.39■□□□□ 0.37
SNIP1-202ENST00000468040 TMEM260Q9NX78 707 aa17.39■□□□□ 0.37
SNIP1-202ENST00000468040 FRMPD4Q14CM0 1322 aa17.39■□□□□ 0.37
SNIP1-202ENST00000468040 PLXNA1Q9UIW2 1896 aa17.39■□□□□ 0.37
SNIP1-202ENST00000468040 DOCK3Q8IZD9 2030 aa17.38■□□□□ 0.37
SNIP1-202ENST00000468040 CCDC194A0A1B0GVG4 234 aa17.38■□□□□ 0.37
SNIP1-202ENST00000468040 VPS37CA5D8V6 355 aaPredicted RBP17.38■□□□□ 0.37
SNIP1-202ENST00000468040 ASB14A6NK59 587 aa17.38■□□□□ 0.37
SNIP1-202ENST00000468040 BTBD18B2RXH4 712 aa17.38■□□□□ 0.37
SNIP1-202ENST00000468040 STX6O43752 255 aa17.38■□□□□ 0.37
SNIP1-202ENST00000468040 NPLOC4Q8TAT6 608 aa17.38■□□□□ 0.37
SNIP1-202ENST00000468040 RAET1EQ8TD07 263 aa17.38■□□□□ 0.37
SNIP1-202ENST00000468040 RASGRP4Q8TDF6 673 aa17.38■□□□□ 0.37
SNIP1-202ENST00000468040 OXER1Q8TDS5 423 aa17.38■□□□□ 0.37
SNIP1-202ENST00000468040 FGD4Q96M96 766 aa17.38■□□□□ 0.37
SNIP1-202ENST00000468040 LCTP09848 1927 aa17.38■□□□□ 0.37
SNIP1-202ENST00000468040 RPTORQ8N122 1335 aa17.38■□□□□ 0.37
SNIP1-202ENST00000468040 ADAMTS3O15072 1205 aa17.37■□□□□ 0.37
SNIP1-202ENST00000468040 EIF2AK2P19525 551 aaKnown RBP17.37■□□□□ 0.37
SNIP1-202ENST00000468040 SREBF1P36956 1147 aa17.37■□□□□ 0.37
SNIP1-202ENST00000468040 NR5A1Q13285 461 aa17.37■□□□□ 0.37
SNIP1-202ENST00000468040 NONOQ15233 471 aaKnown RBP eCLIP17.37■□□□□ 0.37
SNIP1-202ENST00000468040 OLFML2BQ68BL8 750 aa17.37■□□□□ 0.37
SNIP1-202ENST00000468040 MCTP1Q6DN14 999 aa17.37■□□□□ 0.37
SNIP1-202ENST00000468040 MAMDC4Q6UXC1 1216 aa17.37■□□□□ 0.37
SNIP1-202ENST00000468040 CTU1Q7Z7A3 348 aaKnown RBP17.37■□□□□ 0.37
SNIP1-202ENST00000468040 TNFRSF25Q93038 417 aa17.37■□□□□ 0.37
SNIP1-202ENST00000468040 IPO9Q96P70 1041 aaKnown RBP17.37■□□□□ 0.37
SNIP1-202ENST00000468040 PDCD2LQ9BRP1 358 aa17.37■□□□□ 0.37
SNIP1-202ENST00000468040 PRDM10Q9NQV6 1147 aa17.37■□□□□ 0.37
SNIP1-202ENST00000468040 ASTN1O14525 1302 aa17.37■□□□□ 0.37
SNIP1-202ENST00000468040 SYNGAP1Q96PV0 1343 aa17.37■□□□□ 0.37
SNIP1-202ENST00000468040 EDNRBP24530 442 aa17.36■□□□□ 0.37
SNIP1-202ENST00000468040 U2AF2P26368 475 aaKnown RBP eCLIP17.36■□□□□ 0.372e-8■■□□□ 14
SNIP1-202ENST00000468040 PGM5Q15124 567 aa17.36■□□□□ 0.37
SNIP1-202ENST00000468040 PCNX4Q63HM2 1172 aa17.36■□□□□ 0.37
SNIP1-202ENST00000468040 XRRA1Q6P2D8 792 aa17.36■□□□□ 0.37
SNIP1-202ENST00000468040 NOSTRINQ8IVI9 506 aa17.36■□□□□ 0.37
SNIP1-202ENST00000468040 PXYLP1Q8TE99 480 aa17.36■□□□□ 0.37
SNIP1-202ENST00000468040 PGBD1Q96JS3 809 aa17.36■□□□□ 0.37
SNIP1-202ENST00000468040 TINF2Q9BSI4 451 aa17.36■□□□□ 0.37
SNIP1-202ENST00000468040 STAM2O75886 525 aa17.35■□□□□ 0.37
SNIP1-202ENST00000468040 NR3C2P08235 984 aa17.35■□□□□ 0.37
SNIP1-202ENST00000468040 CCND2P30279 289 aa17.35■□□□□ 0.37
SNIP1-202ENST00000468040 ARHGAP4P98171 946 aa17.35■□□□□ 0.37
SNIP1-202ENST00000468040 PDE4DQ08499 809 aa17.35■□□□□ 0.37
SNIP1-202ENST00000468040 STXBP2Q15833 593 aa17.35■□□□□ 0.37
SNIP1-202ENST00000468040 PKN2Q16513 984 aaKnown RBP17.35■□□□□ 0.37
SNIP1-202ENST00000468040 PIK3AP1Q6ZUJ8 805 aa17.35■□□□□ 0.37
SNIP1-202ENST00000468040 SLAIN1Q8ND83 568 aa17.35■□□□□ 0.37
SNIP1-202ENST00000468040 MORC4Q8TE76 937 aa17.35■□□□□ 0.37
SNIP1-202ENST00000468040 MTMR6Q9Y217 621 aa17.35■□□□□ 0.37
SNIP1-202ENST00000468040 PTPN22Q9Y2R2 807 aa17.35■□□□□ 0.37
SNIP1-202ENST00000468040 ADCY3O60266 1144 aa17.34■□□□□ 0.37
SNIP1-202ENST00000468040 CCL14Q16627 93 aa17.34■□□□□ 0.37
SNIP1-202ENST00000468040 MFSD14CQ5VZR4 134 aa17.34■□□□□ 0.37
SNIP1-202ENST00000468040 ARMCX2Q7L311 632 aa17.34■□□□□ 0.37
SNIP1-202ENST00000468040 BRAPQ7Z569 592 aa17.34■□□□□ 0.37
SNIP1-202ENST00000468040 VSIG10LQ86VR7 867 aa17.34■□□□□ 0.37
SNIP1-202ENST00000468040 TBCKQ8TEA7 893 aa17.34■□□□□ 0.37
SNIP1-202ENST00000468040 TRIB2Q92519 343 aa17.34■□□□□ 0.37
SNIP1-202ENST00000468040 FLRT1Q9NZU1 646 aa17.34■□□□□ 0.37
SNIP1-202ENST00000468040 KIF28PB7ZC32 967 aa17.33■□□□□ 0.36
SNIP1-202ENST00000468040 EIF3JO75822 258 aaKnown RBP17.33■□□□□ 0.36
SNIP1-202ENST00000468040 IGHA2P01877 340 aa17.33■□□□□ 0.36
SNIP1-202ENST00000468040 HMGCRP04035 888 aa17.33■□□□□ 0.36
SNIP1-202ENST00000468040 CYP3A4P08684 503 aa17.33■□□□□ 0.36
SNIP1-202ENST00000468040 MYCLP12524 364 aaPredicted RBP17.33■□□□□ 0.36
SNIP1-202ENST00000468040 USP11P51784 963 aa17.33■□□□□ 0.36
SNIP1-202ENST00000468040 UBXN2AP68543 259 aa17.33■□□□□ 0.36
SNIP1-202ENST00000468040 NEK8Q86SG6 692 aa17.33■□□□□ 0.36
SNIP1-202ENST00000468040 IL31RAQ8NI17 732 aa17.33■□□□□ 0.36
SNIP1-202ENST00000468040 CRYGNQ8WXF5 182 aa17.33■□□□□ 0.36
SNIP1-202ENST00000468040 NAP1L4Q99733 375 aaKnown RBP17.33■□□□□ 0.36
SNIP1-202ENST00000468040 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.33■□□□□ 0.36
SNIP1-202ENST00000468040 NRBP1Q9UHY1 535 aa17.33■□□□□ 0.36
SNIP1-202ENST00000468040 NOL7Q9UMY1 257 aaKnown RBP17.33■□□□□ 0.36
SNIP1-202ENST00000468040 CNPY2Q9Y2B0 182 aa17.33■□□□□ 0.36
SNIP1-202ENST00000468040 PTCH2Q9Y6C5 1203 aa17.33■□□□□ 0.36
SNIP1-202ENST00000468040 ZSCAN22P10073 491 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms