RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CEP120Q8N960 986 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 AGBL5Q8NDL9 886 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 WNT8BQ93098 351 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 ZFYVE28Q9HCC9 887 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 ZCCHC17Q9NP64 241 aaKnown RBP7.03□□□□□ -1.28
PTCD3-207ENST00000467273 KANSL3Q9P2N6 904 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 PTCH2Q9Y6C5 1203 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 MED23Q9ULK4 1368 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 ECM29Q5VYK3 1845 aa7.03□□□□□ -1.28
PTCD3-207ENST00000467273 GJB1P08034 283 aa7.02□□□□□ -1.29
PTCD3-207ENST00000467273 GJA8P48165 433 aa7.02□□□□□ -1.29
PTCD3-207ENST00000467273 DACT2Q5SW24 774 aa7.02□□□□□ -1.29
PTCD3-207ENST00000467273 ANKRD13AQ8IZ07 590 aa7.02□□□□□ -1.29
PTCD3-207ENST00000467273 PLBD2Q8NHP8 589 aa7.02□□□□□ -1.29
PTCD3-207ENST00000467273 UBE2Q2Q8WVN8 375 aa7.02□□□□□ -1.29
PTCD3-207ENST00000467273 ZBED3Q96IU2 234 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-207ENST00000467273 ISCA1Q9BUE6 129 aa7.02□□□□□ -1.29
PTCD3-207ENST00000467273 USP26Q9BXU7 913 aa7.02□□□□□ -1.29
PTCD3-207ENST00000467273 DEFB129Q9H1M3 183 aa7.02□□□□□ -1.29
PTCD3-207ENST00000467273 KIAA1522Q9P206 1035 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-207ENST00000467273 COL4A1P02462 1669 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 SSC5DA1L4H1 1573 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 IRS4O14654 1257 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-207ENST00000467273 BMP8BP34820 402 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 ZAP70P43403 619 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 ARL4DP49703 201 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 USP11P51784 963 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 CCDC152Q4G0S7 254 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 GPR152Q8TDT2 470 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 XAGE3Q8WTP9 111 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 EDEM1Q92611 657 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 SHISA4Q96DD7 197 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 FAM89AQ96GI7 184 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 TBC1D32Q96NH3 1257 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 PTPN18Q99952 460 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 THUMPD2Q9BTF0 503 aaKnown RBP7.01□□□□□ -1.29
PTCD3-207ENST00000467273 COA1Q9GZY4 146 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 POLIQ9UNA4 740 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 ZNF804BA4D1E1 1349 aa7.01□□□□□ -1.29
PTCD3-207ENST00000467273 VCANP13611 3396 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 WTIPA6NIX2 430 aaPredicted RBP7□□□□□ -1.29
PTCD3-207ENST00000467273 MYO1BO43795 1136 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 SASH1O94885 1247 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 P4HBP07237 508 aaKnown RBP7□□□□□ -1.29
PTCD3-207ENST00000467273 ACPPP15309 386 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 EIF2S2P20042 333 aaKnown RBP7□□□□□ -1.29
PTCD3-207ENST00000467273 GTF2A2P52657 109 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 LACTBP83111 547 aaPredicted RBP7□□□□□ -1.29
PTCD3-207ENST00000467273 CAP1Q01518 475 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 DNM1Q05193 864 aaKnown RBP7□□□□□ -1.29
PTCD3-207ENST00000467273 AIMP1Q12904 312 aaKnown RBP7□□□□□ -1.29
PTCD3-207ENST00000467273 PRKG1Q13976 671 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 TAF1CQ15572 869 aaPredicted RBP7□□□□□ -1.29
PTCD3-207ENST00000467273 PROSER3Q2NL68 480 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 HGSNATQ68CP4 663 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 ZBTB38Q8NAP3 1195 aaPredicted RBP7□□□□□ -1.29
PTCD3-207ENST00000467273 FBLIM1Q8WUP2 373 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 MRRFQ96E11 262 aaKnown RBP7□□□□□ -1.29
PTCD3-207ENST00000467273 CLMNQ96JQ2 1002 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 CITED4Q96RK1 184 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 PNNQ9H307 717 aaKnown RBP7□□□□□ -1.29
PTCD3-207ENST00000467273 LRRC4CQ9HCJ2 640 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 CYP4F12Q9HCS2 524 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 PAK6Q9NQU5 681 aaPredicted RBP7□□□□□ -1.29
PTCD3-207ENST00000467273 TSPYL4Q9UJ04 414 aa7□□□□□ -1.29
PTCD3-207ENST00000467273 SCAF8Q9UPN6 1271 aaKnown RBP7□□□□□ -1.29
PTCD3-207ENST00000467273 MEGF11A6BM72 1044 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 SOX1O00570 391 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-207ENST00000467273 TREHO43280 583 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 TLR2O60603 784 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 PAPLNO95428 1278 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 IGHA2P01877 340 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 HOXB7P09629 217 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 HOXD10P28358 340 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 ADMP35318 185 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 C19orf57Q0VDD7 668 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 DSC3Q14574 896 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 DLGAP5Q15398 846 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 NFE2L2Q16236 605 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 LRIT3Q3SXY7 679 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 FBLN7Q53RD9 439 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 ANKRD18AQ8IVF6 992 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 DEFB123Q8N688 67 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 SH3TC2Q8TF17 1288 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 FAM129BQ96TA1 746 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 OTOFQ9HC10 1997 aa6.99□□□□□ -1.29
PTCD3-207ENST00000467273 FAM170BA6NMN3 283 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 DBX1A6NMT0 343 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 GPR182O15218 404 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 PDE8AO60658 829 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 PDGFAP04085 211 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 DRD2P14416 443 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 MZF1P28698 734 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-207ENST00000467273 GRK4P32298 578 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 UBXN2AP68543 259 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 PLCB3Q01970 1234 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 TNFAIP1Q13829 316 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 PKN1Q16512 942 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 TTLL5Q6EMB2 1281 aa6.98□□□□□ -1.29
PTCD3-207ENST00000467273 CDPF1Q6NVV7 123 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms