RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 CNPY2Q9Y2B0 182 aa16.61■□□□□ 0.25
DNMT3A-208ENST00000466601 RPTORQ8N122 1335 aa16.61■□□□□ 0.25
DNMT3A-208ENST00000466601 RBBP6Q7Z6E9 1792 aaKnown RBP16.61■□□□□ 0.25
DNMT3A-208ENST00000466601 LCTP09848 1927 aa16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 ESYT2A0FGR8 921 aa16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 CYBAP13498 195 aa16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 CCL5P13501 91 aa16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 EIF2AK2P19525 551 aaKnown RBP16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 NLRP5P59047 1200 aa16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 UBE2SQ16763 222 aa16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 TEX2Q8IWB9 1127 aa16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 TRPV1Q8NER1 839 aa16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 SHISA4Q96DD7 197 aa16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 IWS1Q96ST2 819 aa16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 ZMYND12Q9H0C1 365 aa16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 PXMP2Q9NR77 195 aa16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 NRBP1Q9UHY1 535 aa16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 DDX49Q9Y6V7 483 aaKnown RBP16.6■□□□□ 0.25
DNMT3A-208ENST00000466601 EDNRBP24530 442 aa16.59■□□□□ 0.25
DNMT3A-208ENST00000466601 GNA11P29992 359 aa16.59■□□□□ 0.25
DNMT3A-208ENST00000466601 CCND3P30281 292 aaPredicted RBP16.59■□□□□ 0.25
DNMT3A-208ENST00000466601 PDE4DQ08499 809 aa16.59■□□□□ 0.25
DNMT3A-208ENST00000466601 FAM177A1Q8N128 213 aaPredicted RBP16.59■□□□□ 0.25
DNMT3A-208ENST00000466601 ALG1Q9BT22 464 aa16.59■□□□□ 0.25
DNMT3A-208ENST00000466601 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.59■□□□□ 0.25
DNMT3A-208ENST00000466601 RNF208Q9H0X6 261 aa16.59■□□□□ 0.25
DNMT3A-208ENST00000466601 ABHD16BQ9H3Z7 469 aa16.59■□□□□ 0.25
DNMT3A-208ENST00000466601 NR3C2P08235 984 aa16.58■□□□□ 0.24
DNMT3A-208ENST00000466601 ZNF865P0CJ78 1059 aaPredicted RBP16.58■□□□□ 0.24
DNMT3A-208ENST00000466601 XBP1P17861 261 aa16.58■□□□□ 0.24
DNMT3A-208ENST00000466601 CNGA1P29973 690 aa16.58■□□□□ 0.24
DNMT3A-208ENST00000466601 HMGN5P82970 282 aaKnown RBP16.58■□□□□ 0.24
DNMT3A-208ENST00000466601 ACVR2BQ13705 512 aa16.58■□□□□ 0.24
DNMT3A-208ENST00000466601 EEPD1Q7L9B9 569 aa16.58■□□□□ 0.24
DNMT3A-208ENST00000466601 PDCD2LQ9BRP1 358 aa16.58■□□□□ 0.24
DNMT3A-208ENST00000466601 ZHX1Q9UKY1 873 aaPredicted RBP16.58■□□□□ 0.24
DNMT3A-208ENST00000466601 PCDHA6Q9UN73 950 aa16.58■□□□□ 0.24
DNMT3A-208ENST00000466601 PCDHA8Q9Y5H6 950 aa16.58■□□□□ 0.24
DNMT3A-208ENST00000466601 HTTP42858 3142 aa16.58■□□□□ 0.24
DNMT3A-208ENST00000466601 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
DNMT3A-208ENST00000466601 FOSP01100 380 aaPredicted RBP16.57■□□□□ 0.24
DNMT3A-208ENST00000466601 CLK2P49760 499 aaKnown RBP16.57■□□□□ 0.24
DNMT3A-208ENST00000466601 PGM5Q15124 567 aa16.57■□□□□ 0.24
DNMT3A-208ENST00000466601 STXBP2Q15833 593 aa16.57■□□□□ 0.24
DNMT3A-208ENST00000466601 BICD2Q8TD16 824 aa16.57■□□□□ 0.24
DNMT3A-208ENST00000466601 SNX21Q969T3 373 aa16.57■□□□□ 0.24
DNMT3A-208ENST00000466601 TMEM106CQ9BVX2 250 aa16.57■□□□□ 0.24
DNMT3A-208ENST00000466601 KATNBL1Q9H079 304 aa16.57■□□□□ 0.24
DNMT3A-208ENST00000466601 VTA1Q9NP79 307 aa16.57■□□□□ 0.24
DNMT3A-208ENST00000466601 PAK6Q9NQU5 681 aaPredicted RBP16.57■□□□□ 0.24
DNMT3A-208ENST00000466601 TMEM260Q9NX78 707 aa16.57■□□□□ 0.24
DNMT3A-208ENST00000466601 FRMPD4Q14CM0 1322 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 CCDC85CA6NKD9 419 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 ADAMTS3O15072 1205 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 SEPT4O43236 478 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 MYCLP12524 364 aaPredicted RBP16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 AP3B2Q13367 1082 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 JAKMIP3Q5VZ66 844 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 MCTP2Q6DN12 878 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 GALNT17Q6IS24 598 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 FBXO16Q8IX29 292 aaPredicted RBP16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 FAM184AQ8NB25 1140 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 PHF20Q9BVI0 1012 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 EHMT1Q9H9B1 1298 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 GJB4Q9NTQ9 266 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 FAM184BQ9ULE4 1060 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 PCDHA4Q9UN74 947 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 KCNJ14Q9UNX9 436 aa16.56■□□□□ 0.24
DNMT3A-208ENST00000466601 MCM3APO60318 1980 aa16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 K7ELQ4 463 aaPredicted RBP16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 EIF3JO75822 258 aaKnown RBP16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 GJB1P08034 283 aa16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 AKR1A1P14550 325 aa16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 CCND2P30279 289 aa16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 CUL4AQ13619 759 aa16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 TAPT1Q6NXT6 567 aa16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 VSIG10LQ86VR7 867 aa16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 REXO1Q8N1G1 1221 aaKnown RBP16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 IL31RAQ8NI17 732 aa16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 PGBD1Q96JS3 809 aa16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 DEFB118Q96PH6 123 aa16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 ANO3Q9BYT9 981 aa16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 PDGFCQ9NRA1 345 aa16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 DDX20Q9UHI6 824 aaKnown RBP16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.55■□□□□ 0.24
DNMT3A-208ENST00000466601 MSCO60682 206 aa16.54■□□□□ 0.24
DNMT3A-208ENST00000466601 FOSBP53539 338 aa16.54■□□□□ 0.24
DNMT3A-208ENST00000466601 TRIM29Q14134 588 aa16.54■□□□□ 0.24
DNMT3A-208ENST00000466601 NPY5RQ15761 445 aa16.54■□□□□ 0.24
DNMT3A-208ENST00000466601 CCDC144BQ3MJ40 725 aa16.54■□□□□ 0.24
DNMT3A-208ENST00000466601 HSCBQ8IWL3 235 aa16.54■□□□□ 0.24
DNMT3A-208ENST00000466601 BLIDQ8IZY5 108 aa16.54■□□□□ 0.24
DNMT3A-208ENST00000466601 DAGLBQ8NCG7 672 aa16.54■□□□□ 0.24
DNMT3A-208ENST00000466601 RASGRP4Q8TDF6 673 aa16.54■□□□□ 0.24
DNMT3A-208ENST00000466601 RBM47A0AV96 593 aaKnown RBP16.53■□□□□ 0.24
DNMT3A-208ENST00000466601 SGPL1O95470 568 aa16.53■□□□□ 0.24
DNMT3A-208ENST00000466601 ADCYAP1R1P41586 468 aa16.53■□□□□ 0.24
DNMT3A-208ENST00000466601 GJA8P48165 433 aa16.53■□□□□ 0.24
DNMT3A-208ENST00000466601 ANO1Q5XXA6 986 aa16.53■□□□□ 0.24
DNMT3A-208ENST00000466601 PCNX4Q63HM2 1172 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms