RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 GP2P55259 537 aaKnown RBP7.57□□□□□ -1.2
NCL-208ENST00000466274 AAMPQ13685 434 aa7.57□□□□□ -1.2
NCL-208ENST00000466274 FDX2Q6P4F2 183 aa7.57□□□□□ -1.2
NCL-208ENST00000466274 VN1R5Q7Z5H4 357 aa7.57□□□□□ -1.2
NCL-208ENST00000466274 ANKRD23Q86SG2 305 aa7.57□□□□□ -1.2
NCL-208ENST00000466274 SHKBP1Q8TBC3 707 aa7.57□□□□□ -1.2
NCL-208ENST00000466274 DIS3LQ8TF46 1054 aaKnown RBP7.57□□□□□ -1.2
NCL-208ENST00000466274 XAGE3Q8WTP9 111 aa7.57□□□□□ -1.2
NCL-208ENST00000466274 HOOK2Q96ED9 719 aa7.57□□□□□ -1.2
NCL-208ENST00000466274 UHRF1Q96T88 793 aaPredicted RBP7.57□□□□□ -1.2
NCL-208ENST00000466274 PARK7Q99497 189 aaKnown RBP7.57□□□□□ -1.2
NCL-208ENST00000466274 DDX60Q8IY21 1712 aaKnown RBP7.56□□□□□ -1.2
NCL-208ENST00000466274 SSC5DA1L4H1 1573 aa7.56□□□□□ -1.2
NCL-208ENST00000466274 PDHXO00330 501 aa7.56□□□□□ -1.2
NCL-208ENST00000466274 U2AF1L5P0DN76 240 aaPredicted RBP7.56□□□□□ -1.2
NCL-208ENST00000466274 ARL4DP49703 201 aa7.56□□□□□ -1.2
NCL-208ENST00000466274 FLT3LGP49771 235 aa7.56□□□□□ -1.2
NCL-208ENST00000466274 RBM5P52756 815 aaKnown RBP eCLIP7.56□□□□□ -1.2
NCL-208ENST00000466274 U2AF1Q01081 240 aaKnown RBP eCLIP7.56□□□□□ -1.2
NCL-208ENST00000466274 PPIL2Q13356 520 aa7.56□□□□□ -1.2
NCL-208ENST00000466274 CFAP100Q494V2 611 aa7.56□□□□□ -1.2
NCL-208ENST00000466274 LRP10Q7Z4F1 713 aa7.56□□□□□ -1.2
NCL-208ENST00000466274 ZBTB38Q8NAP3 1195 aaPredicted RBP7.56□□□□□ -1.2
NCL-208ENST00000466274 PLBD2Q8NHP8 589 aa7.56□□□□□ -1.2
NCL-208ENST00000466274 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.56□□□□□ -1.2
NCL-208ENST00000466274 BSNDQ8WZ55 320 aa7.56□□□□□ -1.2
NCL-208ENST00000466274 CDC5LQ99459 802 aaKnown RBP7.56□□□□□ -1.2
NCL-208ENST00000466274 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.56□□□□□ -1.21e-5■■■□□ 18
NCL-208ENST00000466274 PRKAG2Q9UGJ0 569 aa7.56□□□□□ -1.2
NCL-208ENST00000466274 FOXD3Q9UJU5 478 aaPredicted RBP7.56□□□□□ -1.2
NCL-208ENST00000466274 LEMD3Q9Y2U8 911 aa7.56□□□□□ -1.2
NCL-208ENST00000466274 ZNF646O15015 1829 aaPredicted RBP7.55□□□□□ -1.2
NCL-208ENST00000466274 MEGF11A6BM72 1044 aa7.55□□□□□ -1.2
NCL-208ENST00000466274 TNPO2O14787 897 aaKnown RBP7.55□□□□□ -1.2
NCL-208ENST00000466274 PHACTR2O75167 634 aa7.55□□□□□ -1.2
NCL-208ENST00000466274 TNFRSF21O75509 655 aa7.55□□□□□ -1.2
NCL-208ENST00000466274 SPINK2P20155 84 aa7.55□□□□□ -1.2
NCL-208ENST00000466274 GRIK1P39086 918 aa7.55□□□□□ -1.2
NCL-208ENST00000466274 CCT4P50991 539 aaKnown RBP7.55□□□□□ -1.2
NCL-208ENST00000466274 IRAK1P51617 712 aa7.55□□□□□ -1.2
NCL-208ENST00000466274 MRPS5P82675 430 aaKnown RBP7.55□□□□□ -1.2
NCL-208ENST00000466274 SMAD3P84022 425 aaKnown RBP7.55□□□□□ -1.2
NCL-208ENST00000466274 PPATQ06203 517 aa7.55□□□□□ -1.2
NCL-208ENST00000466274 IKBKEQ14164 716 aa7.55□□□□□ -1.2
NCL-208ENST00000466274 COA7Q96BR5 231 aa7.55□□□□□ -1.2
NCL-208ENST00000466274 ASB2Q96Q27 587 aa7.55□□□□□ -1.2
NCL-208ENST00000466274 P2RX7Q99572 595 aaKnown RBP7.55□□□□□ -1.2
NCL-208ENST00000466274 ISCA1Q9BUE6 129 aa7.55□□□□□ -1.2
NCL-208ENST00000466274 GABRQQ9UN88 632 aa7.55□□□□□ -1.2
NCL-208ENST00000466274 SIPA1L3O60292 1781 aaPredicted RBP7.55□□□□□ -1.2
NCL-208ENST00000466274 LRRC37AA6NMS7 1700 aa7.55□□□□□ -1.2
NCL-208ENST00000466274 WDR64B1ANS9 1081 aa7.54□□□□□ -1.2
NCL-208ENST00000466274 PROSER3Q2NL68 480 aa7.54□□□□□ -1.2
NCL-208ENST00000466274 SGO2Q562F6 1265 aa7.54□□□□□ -1.2
NCL-208ENST00000466274 ALKBH2Q6NS38 261 aa7.54□□□□□ -1.2
NCL-208ENST00000466274 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
NCL-208ENST00000466274 C12orf50Q8NA57 414 aaPredicted RBP7.54□□□□□ -1.2
NCL-208ENST00000466274 ASAP3Q8TDY4 903 aa7.54□□□□□ -1.2
NCL-208ENST00000466274 PRMT6Q96LA8 375 aaPredicted RBP7.54□□□□□ -1.2
NCL-208ENST00000466274 MFSD14AQ96MC6 490 aa7.54□□□□□ -1.2
NCL-208ENST00000466274 LATS2Q9NRM7 1088 aa7.54□□□□□ -1.2
NCL-208ENST00000466274 BSDC1Q9NW68 430 aaPredicted RBP7.54□□□□□ -1.2
NCL-208ENST00000466274 TSPYL4Q9UJ04 414 aa7.54□□□□□ -1.2
NCL-208ENST00000466274 CARNS1A5YM72 827 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 F8W031 263 aaPredicted RBP7.53□□□□□ -1.2
NCL-208ENST00000466274 GAS2O43903 313 aaKnown RBP7.53□□□□□ -1.2
NCL-208ENST00000466274 PDE8AO60658 829 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 DLGAP3O95886 979 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 HMGCRP04035 888 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 ANXA1P04083 346 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 MAP4P27816 1152 aaKnown RBP7.53□□□□□ -1.2
NCL-208ENST00000466274 KCNJ4P48050 445 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 FKBP1AP62942 108 aaKnown RBP7.53□□□□□ -1.2
NCL-208ENST00000466274 CC2D1BQ5T0F9 858 aaKnown RBP7.53□□□□□ -1.2
NCL-208ENST00000466274 DTX1Q86Y01 620 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 ZNF428Q96B54 188 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 WRNIP1Q96S55 665 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 USP26Q9BXU7 913 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 TMPRSS13Q9BYE2 586 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 ANKRD2Q9GZV1 360 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 THEGQ9P2T0 379 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 OGDHLQ9ULD0 1010 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 MINPP1Q9UNW1 487 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 SNCAIPQ9Y6H5 919 aa7.53□□□□□ -1.2
NCL-208ENST00000466274 NUP98P52948 1817 aa7.52□□□□□ -1.2
NCL-208ENST00000466274 ANKRD36CQ5JPF3 1778 aa7.52□□□□□ -1.21
NCL-208ENST00000466274 COL2A1P02458 1487 aaPredicted RBP7.52□□□□□ -1.21
NCL-208ENST00000466274 LOC100289279A0A1B0GTE1 492 aa7.52□□□□□ -1.21
NCL-208ENST00000466274 FZD6O60353 706 aa7.52□□□□□ -1.21
NCL-208ENST00000466274 EDN3P14138 238 aa7.52□□□□□ -1.21
NCL-208ENST00000466274 NPR3P17342 541 aa7.52□□□□□ -1.21
NCL-208ENST00000466274 TAL1P17542 331 aaPredicted RBP7.52□□□□□ -1.21
NCL-208ENST00000466274 TMEM31Q5JXX7 168 aa7.52□□□□□ -1.21
NCL-208ENST00000466274 DCAF15Q66K64 600 aa7.52□□□□□ -1.21
NCL-208ENST00000466274 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.52□□□□□ -1.21
NCL-208ENST00000466274 TTYH1Q9H313 450 aaPredicted RBP7.52□□□□□ -1.21
NCL-208ENST00000466274 GOLGA2P5Q9HBQ8 144 aa7.52□□□□□ -1.21
NCL-208ENST00000466274 BABAM1Q9NWV8 329 aa7.52□□□□□ -1.21
NCL-208ENST00000466274 ZNF70Q9UC06 446 aaPredicted RBP7.52□□□□□ -1.21
NCL-208ENST00000466274 HIF3AQ9Y2N7 669 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms