RNA–Protein interactions for RNA: ENST00000466272.1

SMTN-214, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-214ENST00000466272 TRAF1Q13077 416 aa12.63□□□□□ -0.39
SMTN-214ENST00000466272 CPLX2Q6PUV4 134 aaKnown RBP12.63□□□□□ -0.39
SMTN-214ENST00000466272 ZNF713Q8N859 430 aaPredicted RBP12.63□□□□□ -0.39
SMTN-214ENST00000466272 SMARCC2Q8TAQ2 1214 aa12.63□□□□□ -0.39
SMTN-214ENST00000466272 RASGRP4Q8TDF6 673 aa12.63□□□□□ -0.39
SMTN-214ENST00000466272 TMX3Q96JJ7 454 aa12.63□□□□□ -0.39
SMTN-214ENST00000466272 ZFP91Q96JP5 570 aaPredicted RBP12.63□□□□□ -0.39
SMTN-214ENST00000466272 RMDN3Q96TC7 470 aa12.63□□□□□ -0.39
SMTN-214ENST00000466272 RNF208Q9H0X6 261 aa12.63□□□□□ -0.39
SMTN-214ENST00000466272 PSTPIP2Q9H939 334 aa12.63□□□□□ -0.39
SMTN-214ENST00000466272 PAK6Q9NQU5 681 aaPredicted RBP12.63□□□□□ -0.39
SMTN-214ENST00000466272 SH2B1Q9NRF2 756 aaPredicted RBP12.63□□□□□ -0.39
SMTN-214ENST00000466272 TMEM260Q9NX78 707 aa12.63□□□□□ -0.39
SMTN-214ENST00000466272 ORC3Q9UBD5 711 aaPredicted RBP12.63□□□□□ -0.39
SMTN-214ENST00000466272 DNAH12Q6ZR08 3092 aa12.63□□□□□ -0.39
SMTN-214ENST00000466272 FRMPD4Q14CM0 1322 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 RPTORQ8N122 1335 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 DOCK5Q9H7D0 1870 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.62□□□□□ -0.39
SMTN-214ENST00000466272 SMCO2A6NFE2 343 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 ASB14A6NK59 587 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 CNGA1P29973 690 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 TMEM63BQ5T3F8 832 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 MSL3Q8N5Y2 521 aaKnown RBP12.62□□□□□ -0.39
SMTN-214ENST00000466272 MORC4Q8TE76 937 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 CUL5Q93034 780 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 ZSCAN31Q96LW9 406 aaPredicted RBP12.62□□□□□ -0.39
SMTN-214ENST00000466272 DEFB118Q96PH6 123 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 PDCD2LQ9BRP1 358 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 HMX1Q9NP08 348 aaPredicted RBP12.62□□□□□ -0.39
SMTN-214ENST00000466272 RIC8AQ9NPQ8 531 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 PDGFCQ9NRA1 345 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 RBM27Q9P2N5 1060 aaKnown RBP12.62□□□□□ -0.39
SMTN-214ENST00000466272 ADD3Q9UEY8 706 aaKnown RBP12.62□□□□□ -0.39
SMTN-214ENST00000466272 KCNJ14Q9UNX9 436 aa12.62□□□□□ -0.39
SMTN-214ENST00000466272 PIK3CDO00329 1044 aa12.61□□□□□ -0.39
SMTN-214ENST00000466272 PDE4DQ08499 809 aa12.61□□□□□ -0.39
SMTN-214ENST00000466272 ACVR2BQ13705 512 aa12.61□□□□□ -0.39
SMTN-214ENST00000466272 PGM5Q15124 567 aa12.61□□□□□ -0.39
SMTN-214ENST00000466272 NPY5RQ15761 445 aa12.61□□□□□ -0.39
SMTN-214ENST00000466272 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
SMTN-214ENST00000466272 ARHGEF16Q5VV41 709 aa12.61□□□□□ -0.39
SMTN-214ENST00000466272 DNERQ8NFT8 737 aa12.61□□□□□ -0.39
SMTN-214ENST00000466272 CNPY2Q9Y2B0 182 aa12.61□□□□□ -0.39
SMTN-214ENST00000466272 TNRC18O15417 2968 aaPredicted RBP12.6□□□□□ -0.39
SMTN-214ENST00000466272 ESYT2A0FGR8 921 aa12.6□□□□□ -0.39
SMTN-214ENST00000466272 MYCLP12524 364 aaPredicted RBP12.6□□□□□ -0.39
SMTN-214ENST00000466272 ADCYAP1R1P41586 468 aa12.6□□□□□ -0.39
SMTN-214ENST00000466272 CLK2P49760 499 aaKnown RBP12.6□□□□□ -0.39
SMTN-214ENST00000466272 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
SMTN-214ENST00000466272 JAKMIP3Q5VZ66 844 aa12.6□□□□□ -0.39
SMTN-214ENST00000466272 CCDC148Q8NFR7 591 aa12.6□□□□□ -0.39
SMTN-214ENST00000466272 NSUN6Q8TEA1 469 aaKnown RBP12.6□□□□□ -0.39
SMTN-214ENST00000466272 U2AF1L4Q8WU68 220 aaKnown RBP12.6□□□□□ -0.39
SMTN-214ENST00000466272 ALG1Q9BT22 464 aa12.6□□□□□ -0.39
SMTN-214ENST00000466272 ANO3Q9BYT9 981 aa12.6□□□□□ -0.39
SMTN-214ENST00000466272 ZMYND12Q9H0C1 365 aa12.6□□□□□ -0.39
SMTN-214ENST00000466272 DDX20Q9UHI6 824 aaKnown RBP12.6□□□□□ -0.39
SMTN-214ENST00000466272 SEPT4O43236 478 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 ARIH2O95376 493 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 GJB1P08034 283 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 NR3C2P08235 984 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 EN2P19622 333 aaPredicted RBP12.59□□□□□ -0.39
SMTN-214ENST00000466272 NLRP5P59047 1200 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 CCDC144BQ3MJ40 725 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 LHX8Q68G74 356 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 TAPT1Q6NXT6 567 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 SAMD3Q8N6K7 520 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 CCDC12Q8WUD4 166 aaPredicted RBP12.59□□□□□ -0.39
SMTN-214ENST00000466272 TMEM106CQ9BVX2 250 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 MAF1Q9H063 256 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 ABHD16BQ9H3Z7 469 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 VTA1Q9NP79 307 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 MAP3K20Q9NYL2 800 aaKnown RBP12.59□□□□□ -0.39
SMTN-214ENST00000466272 NRBP1Q9UHY1 535 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 PCDHA6Q9UN73 950 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 PCDHA8Q9Y5H6 950 aa12.59□□□□□ -0.39
SMTN-214ENST00000466272 LOC102724159A0A0B4J2E5 919 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 MYADML2A6NDP7 307 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 SPDYE3A6NKU9 549 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 RGS20O76081 388 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 AKR1A1P14550 325 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 CCND2P30279 289 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 MRPL12P52815 198 aaKnown RBP12.58□□□□□ -0.4
SMTN-214ENST00000466272 MRPS9P82933 396 aaKnown RBP12.58□□□□□ -0.4
SMTN-214ENST00000466272 GUCY1B3Q02153 619 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 PWP2Q15269 919 aaKnown RBP12.58□□□□□ -0.4
SMTN-214ENST00000466272 SEPT14Q6ZU15 432 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 REXO1Q8N1G1 1221 aaKnown RBP12.58□□□□□ -0.4
SMTN-214ENST00000466272 OXER1Q8TDS5 423 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 DIS3LQ8TF46 1054 aaKnown RBP12.58□□□□□ -0.4
SMTN-214ENST00000466272 COPS5Q92905 334 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 PHF20Q9BVI0 1012 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 C6orf50Q9HD87 102 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 SH3GLB2Q9NR46 395 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 ALPK3Q96L96 1907 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 SYNRGQ9UMZ2 1314 aa12.58□□□□□ -0.4
SMTN-214ENST00000466272 FAM205CA6NFA0 338 aa12.57□□□□□ -0.4
SMTN-214ENST00000466272 SORBS3O60504 671 aa12.57□□□□□ -0.4
SMTN-214ENST00000466272 SGPL1O95470 568 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms