RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 BICD2Q8TD16 824 aa19.47■□□□□ 0.71
USP39-211ENST00000465282 TAAR1Q96RJ0 339 aa19.47■□□□□ 0.71
USP39-211ENST00000465282 RNF208Q9H0X6 261 aa19.47■□□□□ 0.71
USP39-211ENST00000465282 C6orf50Q9HD87 102 aa19.47■□□□□ 0.71
USP39-211ENST00000465282 PAK6Q9NQU5 681 aaPredicted RBP19.47■□□□□ 0.71
USP39-211ENST00000465282 COL20A1Q9P218 1284 aa19.47■□□□□ 0.71
USP39-211ENST00000465282 FOSP01100 380 aaPredicted RBP19.46■□□□□ 0.71
USP39-211ENST00000465282 GJB1P08034 283 aa19.46■□□□□ 0.71
USP39-211ENST00000465282 HOXA13P31271 388 aaPredicted RBP19.46■□□□□ 0.71
USP39-211ENST00000465282 ACVR2BQ13705 512 aa19.46■□□□□ 0.71
USP39-211ENST00000465282 MTFR1Q15390 333 aa19.46■□□□□ 0.71
USP39-211ENST00000465282 GALNT17Q6IS24 598 aa19.46■□□□□ 0.71
USP39-211ENST00000465282 TYW1BQ6NUM6 668 aa19.46■□□□□ 0.71
USP39-211ENST00000465282 NSUN7Q8NE18 718 aaKnown RBP19.46■□□□□ 0.71
USP39-211ENST00000465282 PURBQ96QR8 312 aaKnown RBP19.46■□□□□ 0.71
USP39-211ENST00000465282 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.46■□□□□ 0.71
USP39-211ENST00000465282 UNC93B1Q9H1C4 597 aa19.46■□□□□ 0.71
USP39-211ENST00000465282 VTA1Q9NP79 307 aa19.46■□□□□ 0.71
USP39-211ENST00000465282 PXMP2Q9NR77 195 aa19.46■□□□□ 0.71
USP39-211ENST00000465282 ORC3Q9UBD5 711 aaPredicted RBP19.46■□□□□ 0.71
USP39-211ENST00000465282 KIAA1217Q5T5P2 1943 aa19.46■□□□□ 0.71
USP39-211ENST00000465282 KIAA0100Q14667 2235 aaKnown RBP19.45■□□□□ 0.7
USP39-211ENST00000465282 SEPT4O43236 478 aa19.45■□□□□ 0.7
USP39-211ENST00000465282 HMGN5P82970 282 aaKnown RBP19.45■□□□□ 0.7
USP39-211ENST00000465282 PDE4DQ08499 809 aa19.45■□□□□ 0.7
USP39-211ENST00000465282 USP17L6PQ6QN14 398 aa19.45■□□□□ 0.7
USP39-211ENST00000465282 TMX3Q96JJ7 454 aa19.45■□□□□ 0.7
USP39-211ENST00000465282 EHMT1Q9H9B1 1298 aa19.45■□□□□ 0.7
USP39-211ENST00000465282 FRMPD4Q14CM0 1322 aa19.45■□□□□ 0.7
USP39-211ENST00000465282 LRRC37A2A6NM11 1700 aa19.45■□□□□ 0.7
USP39-211ENST00000465282 SPDYE3A6NKU9 549 aa19.44■□□□□ 0.7
USP39-211ENST00000465282 ZNF865P0CJ78 1059 aaPredicted RBP19.44■□□□□ 0.7
USP39-211ENST00000465282 AP3B2Q13367 1082 aa19.44■□□□□ 0.7
USP39-211ENST00000465282 STXBP2Q15833 593 aa19.44■□□□□ 0.7
USP39-211ENST00000465282 XRRA1Q6P2D8 792 aa19.44■□□□□ 0.7
USP39-211ENST00000465282 FCHSD1Q86WN1 690 aa19.44■□□□□ 0.7
USP39-211ENST00000465282 CCDC83Q8IWF9 413 aa19.44■□□□□ 0.7
USP39-211ENST00000465282 KATNBL1Q9H079 304 aa19.44■□□□□ 0.7
USP39-211ENST00000465282 CCDC85CA6NKD9 419 aa19.43■□□□□ 0.7
USP39-211ENST00000465282 EIF3JO75822 258 aaKnown RBP19.43■□□□□ 0.7
USP39-211ENST00000465282 STAM2O75886 525 aa19.43■□□□□ 0.7
USP39-211ENST00000465282 NR3C2P08235 984 aa19.43■□□□□ 0.7
USP39-211ENST00000465282 AKR1A1P14550 325 aa19.43■□□□□ 0.7
USP39-211ENST00000465282 CNGA1P29973 690 aa19.43■□□□□ 0.7
USP39-211ENST00000465282 CCND3P30281 292 aaPredicted RBP19.43■□□□□ 0.7
USP39-211ENST00000465282 ST3GAL1Q11201 340 aa19.43■□□□□ 0.7
USP39-211ENST00000465282 PRAMEF19Q5SWL8 479 aa19.43■□□□□ 0.7
USP39-211ENST00000465282 VSIG10LQ86VR7 867 aa19.43■□□□□ 0.7
USP39-211ENST00000465282 TRPV1Q8NER1 839 aa19.43■□□□□ 0.7
USP39-211ENST00000465282 PDCD2LQ9BRP1 358 aa19.43■□□□□ 0.7
USP39-211ENST00000465282 VPS54Q9P1Q0 977 aa19.43■□□□□ 0.7
USP39-211ENST00000465282 DDX20Q9UHI6 824 aaKnown RBP19.43■□□□□ 0.7
USP39-211ENST00000465282 FAM184BQ9ULE4 1060 aa19.43■□□□□ 0.7
USP39-211ENST00000465282 FRMPD3Q5JV73 1810 aa19.43■□□□□ 0.7
USP39-211ENST00000465282 PPFIA3O75145 1194 aa19.42■□□□□ 0.7
USP39-211ENST00000465282 CD2BP2O95400 341 aaKnown RBP19.42■□□□□ 0.7
USP39-211ENST00000465282 SGPL1O95470 568 aa19.42■□□□□ 0.7
USP39-211ENST00000465282 FDPSP14324 419 aaKnown RBP19.42■□□□□ 0.7
USP39-211ENST00000465282 EIF2AK2P19525 551 aaKnown RBP19.42■□□□□ 0.7
USP39-211ENST00000465282 GJA8P48165 433 aa19.42■□□□□ 0.7
USP39-211ENST00000465282 CLK2P49760 499 aaKnown RBP19.42■□□□□ 0.7
USP39-211ENST00000465282 NLRP5P59047 1200 aa19.42■□□□□ 0.7
USP39-211ENST00000465282 PGM5Q15124 567 aa19.42■□□□□ 0.7
USP39-211ENST00000465282 IQSEC1Q6DN90 963 aa19.42■□□□□ 0.7
USP39-211ENST00000465282 REXO1Q8N1G1 1221 aaKnown RBP19.42■□□□□ 0.7
USP39-211ENST00000465282 ZHX1Q9UKY1 873 aaPredicted RBP19.42■□□□□ 0.7
USP39-211ENST00000465282 BRCA2P51587 3418 aa19.42■□□□□ 0.7
USP39-211ENST00000465282 MYCP01106 439 aaPredicted RBP19.41■□□□□ 0.7
USP39-211ENST00000465282 CCND2P30279 289 aa19.41■□□□□ 0.7
USP39-211ENST00000465282 CCDC144BQ3MJ40 725 aa19.41■□□□□ 0.7
USP39-211ENST00000465282 PCNX4Q63HM2 1172 aa19.41■□□□□ 0.7
USP39-211ENST00000465282 SNX21Q969T3 373 aa19.41■□□□□ 0.7
USP39-211ENST00000465282 DEFB118Q96PH6 123 aa19.41■□□□□ 0.7
USP39-211ENST00000465282 ALG1Q9BT22 464 aa19.41■□□□□ 0.7
USP39-211ENST00000465282 CRISPLD2Q9H0B8 497 aa19.41■□□□□ 0.7
USP39-211ENST00000465282 PCDHA6Q9UN73 950 aa19.41■□□□□ 0.7
USP39-211ENST00000465282 PCDHA4Q9UN74 947 aa19.41■□□□□ 0.7
USP39-211ENST00000465282 KIF3AQ9Y496 699 aa19.41■□□□□ 0.7
USP39-211ENST00000465282 PCDHA8Q9Y5H6 950 aa19.41■□□□□ 0.7
USP39-211ENST00000465282 RBM47A0AV96 593 aaKnown RBP19.4■□□□□ 0.7
USP39-211ENST00000465282 UBE2SQ16763 222 aa19.4■□□□□ 0.7
USP39-211ENST00000465282 LHX8Q68G74 356 aa19.4■□□□□ 0.7
USP39-211ENST00000465282 TAPT1Q6NXT6 567 aa19.4■□□□□ 0.7
USP39-211ENST00000465282 KCNV1Q6PIU1 500 aa19.4■□□□□ 0.7
USP39-211ENST00000465282 DAGLBQ8NCG7 672 aa19.4■□□□□ 0.7
USP39-211ENST00000465282 U2AF1L4Q8WU68 220 aaKnown RBP19.4■□□□□ 0.7
USP39-211ENST00000465282 SCFD2Q8WU76 684 aa19.4■□□□□ 0.7
USP39-211ENST00000465282 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.4■□□□□ 0.7
USP39-211ENST00000465282 JAK2O60674 1132 aa19.39■□□□□ 0.69
USP39-211ENST00000465282 DUSP11O75319 330 aaKnown RBP19.39■□□□□ 0.69
USP39-211ENST00000465282 RARBP10826 455 aa19.39■□□□□ 0.69
USP39-211ENST00000465282 TRIM29Q14134 588 aa19.39■□□□□ 0.69
USP39-211ENST00000465282 ANKLE1Q8NAG6 615 aa19.39■□□□□ 0.69
USP39-211ENST00000465282 AIFM3Q96NN9 605 aa19.39■□□□□ 0.69
USP39-211ENST00000465282 PHF20Q9BVI0 1012 aa19.39■□□□□ 0.69
USP39-211ENST00000465282 OGDHLQ9ULD0 1010 aa19.39■□□□□ 0.69
USP39-211ENST00000465282 Q9Y3F1 56 aa19.39■□□□□ 0.69
USP39-211ENST00000465282 NKRFO15226 690 aaKnown RBP eCLIP19.38■□□□□ 0.69
USP39-211ENST00000465282 TGFB3P10600 412 aa19.38■□□□□ 0.69
USP39-211ENST00000465282 MYCLP12524 364 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms