RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 JMJD4Q9H9V9 463 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 GRIN2DO15399 1336 aa10.69□□□□□ -0.7
BRCA1-207ENST00000461798 ABCB11O95342 1321 aa10.69□□□□□ -0.7
BRCA1-207ENST00000461798 PALM3A6NDB9 673 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-207ENST00000461798 NKRFO15226 690 aaKnown RBP eCLIP10.69□□□□□ -0.7
BRCA1-207ENST00000461798 EPHB4P54760 987 aa10.69□□□□□ -0.7
BRCA1-207ENST00000461798 SMAD3P84022 425 aaKnown RBP10.69□□□□□ -0.7
BRCA1-207ENST00000461798 GHRHRQ02643 423 aa10.69□□□□□ -0.7
BRCA1-207ENST00000461798 FPGSQ05932 587 aa10.69□□□□□ -0.7
BRCA1-207ENST00000461798 TRDNQ13061 729 aa10.69□□□□□ -0.7
BRCA1-207ENST00000461798 QRICH1Q2TAL8 776 aa10.69□□□□□ -0.7
BRCA1-207ENST00000461798 IFIT1BQ5T764 474 aaKnown RBP10.69□□□□□ -0.7
BRCA1-207ENST00000461798 MFSD5Q6N075 450 aa10.69□□□□□ -0.7
BRCA1-207ENST00000461798 CXCL17Q6UXB2 119 aa10.69□□□□□ -0.7
BRCA1-207ENST00000461798 CYB5R4Q7L1T6 521 aa10.69□□□□□ -0.7
BRCA1-207ENST00000461798 MCF2L2Q86YR7 1114 aa10.69□□□□□ -0.7
BRCA1-207ENST00000461798 SYTL5Q8TDW5 730 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-207ENST00000461798 MTMR8Q96EF0 704 aa10.69□□□□□ -0.7
BRCA1-207ENST00000461798 MRPL11Q9Y3B7 192 aaKnown RBP10.69□□□□□ -0.7
BRCA1-207ENST00000461798 DNAH12Q6ZR08 3092 aa10.69□□□□□ -0.7
BRCA1-207ENST00000461798 KLRF2D3W0D1 207 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 TLR3O15455 904 aaKnown RBP10.68□□□□□ -0.7
BRCA1-207ENST00000461798 PTGS1P23219 599 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 PDE4DQ08499 809 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 ITGA7Q13683 1181 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 USH1GQ495M9 461 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 Q7L0L9 218 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 FBXO11Q86XK2 927 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 STAG2Q8N3U4 1231 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 SAMD3Q8N6K7 520 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 SCFD2Q8WU76 684 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 TBC1D5Q92609 795 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 IWS1Q96ST2 819 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 POLR3EQ9NVU0 708 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 MAP3K20Q9NYL2 800 aaKnown RBP10.68□□□□□ -0.7
BRCA1-207ENST00000461798 MAD2L2Q9UI95 211 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 STXBP5LQ9Y2K9 1186 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 MCM3APO60318 1980 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 LTBP2Q14767 1821 aa10.68□□□□□ -0.7
BRCA1-207ENST00000461798 A6NJR5 290 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 E7EWF7 191 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 KPNA6O60684 536 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 CPT1AP50416 773 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 TROAPQ12815 778 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 CCDC62Q6P9F0 684 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 C16orf59Q7L2K0 433 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 NCOA7Q8NI08 942 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 NSUN6Q8TEA1 469 aaKnown RBP10.67□□□□□ -0.7
BRCA1-207ENST00000461798 TAAR1Q96RJ0 339 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 MTA3Q9BTC8 594 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 AMNQ9BXJ7 453 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 RIOX1Q9H6W3 641 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 VAT1LQ9HCJ6 419 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 COL20A1Q9P218 1284 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 TAF6LQ9Y6J9 622 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 LAMA4Q16363 1823 aa10.67□□□□□ -0.7
BRCA1-207ENST00000461798 OPLAHO14841 1288 aa10.66□□□□□ -0.7
BRCA1-207ENST00000461798 IFIT3O14879 490 aaKnown RBP10.66□□□□□ -0.7
BRCA1-207ENST00000461798 ZBTB5O15062 677 aa10.66□□□□□ -0.7
BRCA1-207ENST00000461798 PURAQ00577 322 aaKnown RBP10.66□□□□□ -0.7
BRCA1-207ENST00000461798 TRAF1Q13077 416 aa10.66□□□□□ -0.7
BRCA1-207ENST00000461798 PPIGQ13427 754 aaKnown RBP eCLIP10.66□□□□□ -0.72e-6■■■■□ 20.9
BRCA1-207ENST00000461798 TTLL4Q14679 1199 aa10.66□□□□□ -0.7
BRCA1-207ENST00000461798 GRM4Q14833 912 aa10.66□□□□□ -0.7
BRCA1-207ENST00000461798 PPP2R5BQ15173 497 aa10.66□□□□□ -0.7
BRCA1-207ENST00000461798 SLC35G1Q2M3R5 365 aa10.66□□□□□ -0.7
BRCA1-207ENST00000461798 RASIP1Q5U651 963 aa10.66□□□□□ -0.7
BRCA1-207ENST00000461798 STOX1Q6ZVD7 989 aa10.66□□□□□ -0.7
BRCA1-207ENST00000461798 RALYLQ86SE5 291 aaKnown RBP10.66□□□□□ -0.7
BRCA1-207ENST00000461798 TMEM199Q8N511 208 aa10.66□□□□□ -0.7
BRCA1-207ENST00000461798 IGDCC4Q8TDY8 1250 aa10.66□□□□□ -0.7
BRCA1-207ENST00000461798 RMDN3Q96TC7 470 aa10.66□□□□□ -0.7
BRCA1-207ENST00000461798 MAP3K14Q99558 947 aa10.66□□□□□ -0.7
BRCA1-207ENST00000461798 MTG1Q9BT17 334 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-207ENST00000461798 LCTP09848 1927 aa10.65□□□□□ -0.7
BRCA1-207ENST00000461798 TMEM265A0A087WTH1 108 aa10.65□□□□□ -0.7
BRCA1-207ENST00000461798 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 ERICH2A1L162 156 aa10.65□□□□□ -0.7
BRCA1-207ENST00000461798 DHX16O60231 1041 aaKnown RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 PPP1R11O60927 126 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 EIF3JO75822 258 aaKnown RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 TXNP10599 105 aaKnown RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 HSD17B4P51659 736 aa10.65□□□□□ -0.7
BRCA1-207ENST00000461798 ANTXR2P58335 489 aa10.65□□□□□ -0.7
BRCA1-207ENST00000461798 WTAPQ15007 396 aa10.65□□□□□ -0.7
BRCA1-207ENST00000461798 SART3Q15020 963 aaKnown RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 STXBP2Q15833 593 aa10.65□□□□□ -0.7
BRCA1-207ENST00000461798 BRDTQ58F21 947 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 TMEM240Q5SV17 173 aa10.65□□□□□ -0.7
BRCA1-207ENST00000461798 MB21D2Q8IYB1 491 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 OR6J1Q8NGC5 347 aa10.65□□□□□ -0.7
BRCA1-207ENST00000461798 RNPC3Q96LT9 517 aaKnown RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 GUCD1Q96NT3 240 aa10.65□□□□□ -0.7
BRCA1-207ENST00000461798 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 NOC4LQ9BVI4 516 aaKnown RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 LSG1Q9H089 658 aaKnown RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 TRPV6Q9H1D0 765 aa10.65□□□□□ -0.7
BRCA1-207ENST00000461798 ALDH8A1Q9H2A2 487 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 SEMA6BQ9H3T3 888 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms