RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 CYP3A4P08684 503 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 STAT6P42226 847 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 GMPSP49915 693 aaPredicted RBP12.26□□□□□ -0.45
IFT88-204ENST00000461115 STAT2P52630 851 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 PLCB2Q00722 1185 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 RASA3Q14644 834 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 KARSQ15046 597 aaKnown RBP12.26□□□□□ -0.45
IFT88-204ENST00000461115 RRAGBQ5VZM2 374 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 FBXO11Q86XK2 927 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 LRRC15Q8TF66 581 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 CHURC1Q8WUH1 139 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 C7orf25Q9BPX7 421 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 SPTLC3Q9NUV7 552 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 RMND1Q9NWS8 449 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 BCS1LQ9Y276 419 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 RLFQ13129 1914 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 SHTN1A0MZ66 631 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 CTNND1O60716 968 aaKnown RBP12.25□□□□□ -0.45
IFT88-204ENST00000461115 RHOBTB3O94955 611 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 TDP2O95551 362 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 EGFRP00533 1210 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 SREBF1P36956 1147 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 AFMP43652 599 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 FANCCQ00597 558 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 FMR1Q06787 632 aaKnown RBP eCLIP12.25□□□□□ -0.45
IFT88-204ENST00000461115 CALCRLQ16602 461 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 UBE2SQ16763 222 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 Q4G0T1 1027 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 ZNF658Q5TYW1 1059 aaPredicted RBP12.25□□□□□ -0.45
IFT88-204ENST00000461115 CCDC186Q7Z3E2 898 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 CABP7Q86V35 215 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 NUP88Q99567 741 aaPredicted RBP12.25□□□□□ -0.45
IFT88-204ENST00000461115 P2RX7Q99572 595 aaKnown RBP12.25□□□□□ -0.45
IFT88-204ENST00000461115 ANO3Q9BYT9 981 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 RAB34Q9BZG1 259 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 TTC12Q9H892 705 aaPredicted RBP12.25□□□□□ -0.45
IFT88-204ENST00000461115 STK17AQ9UEE5 414 aa12.25□□□□□ -0.45
IFT88-204ENST00000461115 POLR2AP24928 1970 aaKnown RBP12.25□□□□□ -0.45
IFT88-204ENST00000461115 LRRC10BA6NIK2 292 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 CBFA2T2O43439 604 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 OFD1O75665 1012 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 RPN1P04843 607 aaKnown RBP12.24□□□□□ -0.45
IFT88-204ENST00000461115 CDC25AP30304 524 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 GSDMDP57764 484 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 CCDC144BQ3MJ40 725 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 TMEM119Q4V9L6 283 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 CDKAL1Q5VV42 579 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 SPATA1Q5VX52 437 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 ISM2Q6H9L7 571 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 KCTD17Q8N5Z5 321 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 LPAR1Q92633 364 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 XPO4Q9C0E2 1151 aaKnown RBP12.24□□□□□ -0.45
IFT88-204ENST00000461115 KIAA1683Q9H0B3 1180 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 KCND1Q9NSA2 647 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 FANCLQ9NW38 375 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 LRWD1Q9UFC0 647 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 CNOT7Q9UIV1 285 aaKnown RBP12.24□□□□□ -0.45
IFT88-204ENST00000461115 FEM1BQ9UK73 627 aa12.24□□□□□ -0.45
IFT88-204ENST00000461115 PP2D1A8MPX8 630 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 USP17L15C9J2P7 530 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 USP17L13C9JLJ4 530 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 USP17L11C9JVI0 530 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 USP17L18D6R9N7 530 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 USP17L22D6RA61 530 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 USP17L17D6RBQ6 530 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 USP17L19D6RCP7 530 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 USP17L20D6RJB6 530 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 ATP1A3P13637 1013 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 PLCG1P19174 1290 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 LMOD1P29536 600 aaPredicted RBP12.23□□□□□ -0.45
IFT88-204ENST00000461115 RASSF7Q02833 373 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 USP17L24Q0WX57 530 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 GRB10Q13322 594 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 TMEM266Q2M3C6 531 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 USP17L6PQ6QN14 398 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 APTXQ7Z2E3 356 aaKnown RBP12.23□□□□□ -0.45
IFT88-204ENST00000461115 SAMD3Q8N6K7 520 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 SPC24Q8NBT2 197 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 GIMAP8Q8ND71 665 aaPredicted RBP12.23□□□□□ -0.45
IFT88-204ENST00000461115 LENG9Q96B70 501 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 PNMA5Q96PV4 448 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 BLOC1S4Q9NUP1 217 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 IFNKQ9P0W0 207 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 DDX25Q9UHL0 483 aaKnown RBP12.23□□□□□ -0.45
IFT88-204ENST00000461115 NRBP1Q9UHY1 535 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 RWDD2AQ9UIY3 292 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 NFE2L3Q9Y4A8 694 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 PPP2R3BQ9Y5P8 575 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 RBBP6Q7Z6E9 1792 aaKnown RBP12.23□□□□□ -0.45
IFT88-204ENST00000461115 PAPPA2Q9BXP8 1791 aa12.23□□□□□ -0.45
IFT88-204ENST00000461115 WDR46O15213 610 aaKnown RBP12.22□□□□□ -0.45
IFT88-204ENST00000461115 PTGS1P23219 599 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 CASP1P29466 404 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 PPP1R2P41236 205 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 TECP42680 631 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 KCNJ6P48051 423 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 ARHGAP4P98171 946 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 FAM83BQ5T0W9 1011 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 FOXR2Q6PJQ5 311 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 LRRC8AQ8IWT6 810 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms