RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.1■□□□□ 0.17
HDLBP-229ENST00000460826 RIC8AQ9NPQ8 531 aa16.1■□□□□ 0.17
HDLBP-229ENST00000460826 ORC3Q9UBD5 711 aaPredicted RBP16.1■□□□□ 0.17
HDLBP-229ENST00000460826 MYH7BA7E2Y1 1941 aa16.09■□□□□ 0.17
HDLBP-229ENST00000460826 EDNRBP24530 442 aa16.09■□□□□ 0.17
HDLBP-229ENST00000460826 IL31RAQ8NI17 732 aa16.09■□□□□ 0.17
HDLBP-229ENST00000460826 SMARCC2Q8TAQ2 1214 aa16.09■□□□□ 0.17
HDLBP-229ENST00000460826 CUL5Q93034 780 aa16.09■□□□□ 0.17
HDLBP-229ENST00000460826 RNF208Q9H0X6 261 aa16.09■□□□□ 0.17
HDLBP-229ENST00000460826 HMX1Q9NP08 348 aaPredicted RBP16.09■□□□□ 0.17
HDLBP-229ENST00000460826 PXMP2Q9NR77 195 aa16.09■□□□□ 0.17
HDLBP-229ENST00000460826 GJB4Q9NTQ9 266 aa16.09■□□□□ 0.17
HDLBP-229ENST00000460826 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
HDLBP-229ENST00000460826 ESYT2A0FGR8 921 aa16.08■□□□□ 0.16
HDLBP-229ENST00000460826 CCDC85CA6NKD9 419 aa16.08■□□□□ 0.16
HDLBP-229ENST00000460826 MCM2P49736 904 aa16.08■□□□□ 0.16
HDLBP-229ENST00000460826 ACVR2BQ13705 512 aa16.08■□□□□ 0.16
HDLBP-229ENST00000460826 IFFO2Q5TF58 517 aa16.08■□□□□ 0.16
HDLBP-229ENST00000460826 ARHGEF16Q5VV41 709 aa16.08■□□□□ 0.16
HDLBP-229ENST00000460826 EEPD1Q7L9B9 569 aa16.08■□□□□ 0.16
HDLBP-229ENST00000460826 FBXO16Q8IX29 292 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-229ENST00000460826 NSUN6Q8TEA1 469 aaKnown RBP16.08■□□□□ 0.16
HDLBP-229ENST00000460826 PDCD2LQ9BRP1 358 aa16.08■□□□□ 0.16
HDLBP-229ENST00000460826 ZMYND12Q9H0C1 365 aa16.08■□□□□ 0.16
HDLBP-229ENST00000460826 PAK6Q9NQU5 681 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-229ENST00000460826 TMEM260Q9NX78 707 aa16.08■□□□□ 0.16
HDLBP-229ENST00000460826 ZHX1Q9UKY1 873 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-229ENST00000460826 CNPY2Q9Y2B0 182 aa16.08■□□□□ 0.16
HDLBP-229ENST00000460826 FRMPD4Q14CM0 1322 aa16.08■□□□□ 0.16
HDLBP-229ENST00000460826 LOC102724159A0A0B4J2E5 919 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 NR3C2P08235 984 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 CNGA1P29973 690 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 CLK2P49760 499 aaKnown RBP16.07■□□□□ 0.16
HDLBP-229ENST00000460826 MRPL12P52815 198 aaKnown RBP16.07■□□□□ 0.16
HDLBP-229ENST00000460826 PDE4DQ08499 809 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 PGM5Q15124 567 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 PWP2Q15269 919 aaKnown RBP16.07■□□□□ 0.16
HDLBP-229ENST00000460826 NPY5RQ15761 445 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 CCDC148Q8NFR7 591 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 ZFP91Q96JP5 570 aaPredicted RBP16.07■□□□□ 0.16
HDLBP-229ENST00000460826 PGBD1Q96JS3 809 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 LLPHQ9BRT6 129 aaKnown RBP16.07■□□□□ 0.16
HDLBP-229ENST00000460826 ALG1Q9BT22 464 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 ABHD16BQ9H3Z7 469 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 SH3GLB2Q9NR46 395 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 PDGFCQ9NRA1 345 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 NRBP1Q9UHY1 535 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 KCNJ14Q9UNX9 436 aa16.07■□□□□ 0.16
HDLBP-229ENST00000460826 POTEFA5A3E0 1075 aa16.06■□□□□ 0.16
HDLBP-229ENST00000460826 ADCY6O43306 1168 aa16.06■□□□□ 0.16
HDLBP-229ENST00000460826 MYCLP12524 364 aaPredicted RBP16.06■□□□□ 0.16
HDLBP-229ENST00000460826 FOSBP53539 338 aa16.06■□□□□ 0.16
HDLBP-229ENST00000460826 SOX10P56693 466 aa16.06■□□□□ 0.16
HDLBP-229ENST00000460826 JAKMIP3Q5VZ66 844 aa16.06■□□□□ 0.16
HDLBP-229ENST00000460826 ANO1Q5XXA6 986 aa16.06■□□□□ 0.16
HDLBP-229ENST00000460826 TAPT1Q6NXT6 567 aa16.06■□□□□ 0.16
HDLBP-229ENST00000460826 RASGRP4Q8TDF6 673 aa16.06■□□□□ 0.16
HDLBP-229ENST00000460826 CCDC12Q8WUD4 166 aaPredicted RBP16.06■□□□□ 0.16
HDLBP-229ENST00000460826 LENG1Q96BZ8 264 aaPredicted RBP16.06■□□□□ 0.16
HDLBP-229ENST00000460826 DEFB118Q96PH6 123 aa16.06■□□□□ 0.16
HDLBP-229ENST00000460826 IWS1Q96ST2 819 aa16.06■□□□□ 0.16
HDLBP-229ENST00000460826 C6orf50Q9HD87 102 aa16.06■□□□□ 0.16
HDLBP-229ENST00000460826 PCDHA6Q9UN73 950 aa16.06■□□□□ 0.16
HDLBP-229ENST00000460826 PCDHA8Q9Y5H6 950 aa16.06■□□□□ 0.16
HDLBP-229ENST00000460826 DOCK5Q9H7D0 1870 aa16.05■□□□□ 0.16
HDLBP-229ENST00000460826 SEPT4O43236 478 aa16.05■□□□□ 0.16
HDLBP-229ENST00000460826 GJB1P08034 283 aa16.05■□□□□ 0.16
HDLBP-229ENST00000460826 PTGS1P23219 599 aa16.05■□□□□ 0.16
HDLBP-229ENST00000460826 NLRP5P59047 1200 aa16.05■□□□□ 0.16
HDLBP-229ENST00000460826 CCDC144BQ3MJ40 725 aa16.05■□□□□ 0.16
HDLBP-229ENST00000460826 TMEM63BQ5T3F8 832 aa16.05■□□□□ 0.16
HDLBP-229ENST00000460826 LHX8Q68G74 356 aa16.05■□□□□ 0.16
HDLBP-229ENST00000460826 PHF20Q9BVI0 1012 aa16.05■□□□□ 0.16
HDLBP-229ENST00000460826 TMEM106CQ9BVX2 250 aa16.05■□□□□ 0.16
HDLBP-229ENST00000460826 ANO3Q9BYT9 981 aa16.05■□□□□ 0.16
HDLBP-229ENST00000460826 GLT8D2Q9H1C3 349 aa16.05■□□□□ 0.16
HDLBP-229ENST00000460826 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
HDLBP-229ENST00000460826 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-229ENST00000460826 SPDYE3A6NKU9 549 aa16.04■□□□□ 0.16
HDLBP-229ENST00000460826 RGS20O76081 388 aa16.04■□□□□ 0.16
HDLBP-229ENST00000460826 ADCYAP1R1P41586 468 aa16.04■□□□□ 0.16
HDLBP-229ENST00000460826 MRPS9P82933 396 aaKnown RBP16.04■□□□□ 0.16
HDLBP-229ENST00000460826 STXBP2Q15833 593 aa16.04■□□□□ 0.16
HDLBP-229ENST00000460826 VSIG10LQ86VR7 867 aa16.04■□□□□ 0.16
HDLBP-229ENST00000460826 REXO1Q8N1G1 1221 aaKnown RBP16.04■□□□□ 0.16
HDLBP-229ENST00000460826 U2AF1L4Q8WU68 220 aaKnown RBP16.04■□□□□ 0.16
HDLBP-229ENST00000460826 WASF1Q92558 559 aa16.04■□□□□ 0.16
HDLBP-229ENST00000460826 MPHOSPH6Q99547 160 aaKnown RBP16.04■□□□□ 0.16
HDLBP-229ENST00000460826 DDX20Q9UHI6 824 aaKnown RBP16.04■□□□□ 0.16
HDLBP-229ENST00000460826 RBM47A0AV96 593 aaKnown RBP16.03■□□□□ 0.16
HDLBP-229ENST00000460826 B4DLN1 442 aa16.03■□□□□ 0.16
HDLBP-229ENST00000460826 M0R2N6 131 aa16.03■□□□□ 0.16
HDLBP-229ENST00000460826 SGPL1O95470 568 aa16.03■□□□□ 0.16
HDLBP-229ENST00000460826 AKR1A1P14550 325 aa16.03■□□□□ 0.16
HDLBP-229ENST00000460826 GNA11P29992 359 aa16.03■□□□□ 0.16
HDLBP-229ENST00000460826 CCND2P30279 289 aa16.03■□□□□ 0.16
HDLBP-229ENST00000460826 AP3B2Q13367 1082 aa16.03■□□□□ 0.16
HDLBP-229ENST00000460826 CUL4AQ13619 759 aa16.03■□□□□ 0.16
HDLBP-229ENST00000460826 GJC2Q5T442 439 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-229ENST00000460826 TEX2Q8IWB9 1127 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms