RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 ADD3Q9UEY8 706 aaKnown RBP11.64□□□□□ -0.55
UPF2-204ENST00000460569 PCDHA6Q9UN73 950 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 GABRQQ9UN88 632 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 PCDHA8Q9Y5H6 950 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 SOWAHBA6NEL2 793 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 KIF28PB7ZC32 967 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 M0R2N6 131 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 FOSP01100 380 aaPredicted RBP11.63□□□□□ -0.55
UPF2-204ENST00000460569 GNRH1P01148 92 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 EIF2AK2P19525 551 aaKnown RBP11.63□□□□□ -0.55
UPF2-204ENST00000460569 CYP2B6P20813 491 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 ALDH5A1P51649 535 aaPredicted RBP11.63□□□□□ -0.55
UPF2-204ENST00000460569 LBX1P52954 281 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 UBXN2AP68543 259 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 ZNF792Q3KQV3 632 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 ARHGEF16Q5VV41 709 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 PIK3AP1Q6ZUJ8 805 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 FERMT3Q86UX7 667 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 NPLOC4Q8TAT6 608 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 FOXP1Q9H334 677 aaPredicted RBP11.63□□□□□ -0.55
UPF2-204ENST00000460569 SRRDQ9UH36 339 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 GJD2Q9UKL4 321 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 MTMR6Q9Y217 621 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 TRIM17Q9Y577 477 aa11.63□□□□□ -0.55
UPF2-204ENST00000460569 ASTN1O14525 1302 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 FRMPD4Q14CM0 1322 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 RPTORQ8N122 1335 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 FAM205CA6NFA0 338 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 PDIA4P13667 645 aaKnown RBP11.62□□□□□ -0.55
UPF2-204ENST00000460569 FLT3LGP49771 235 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 PKP1Q13835 747 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 NONOQ15233 471 aaKnown RBP eCLIP11.62□□□□□ -0.55
UPF2-204ENST00000460569 FOXD4L5Q5VV16 416 aaPredicted RBP11.62□□□□□ -0.55
UPF2-204ENST00000460569 NOSTRINQ8IVI9 506 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 DNERQ8NFT8 737 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 NSUN6Q8TEA1 469 aaKnown RBP11.62□□□□□ -0.55
UPF2-204ENST00000460569 FOXD4L4Q8WXT5 416 aaPredicted RBP11.62□□□□□ -0.55
UPF2-204ENST00000460569 USP6NLQ92738 828 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 TNFRSF25Q93038 417 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 FGD4Q96M96 766 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 PXMP2Q9NR77 195 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 DIS3Q9Y2L1 958 aaKnown RBP11.62□□□□□ -0.55
UPF2-204ENST00000460569 KIAA1217Q5T5P2 1943 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 PCNTO95613 3336 aa11.62□□□□□ -0.55
UPF2-204ENST00000460569 HOXC6P09630 235 aa11.61□□□□□ -0.55
UPF2-204ENST00000460569 SREBF1P36956 1147 aa11.61□□□□□ -0.55
UPF2-204ENST00000460569 PGM5Q15124 567 aa11.61□□□□□ -0.55
UPF2-204ENST00000460569 INF2Q27J81 1249 aa11.61□□□□□ -0.55
UPF2-204ENST00000460569 EARS2Q5JPH6 523 aaKnown RBP11.61□□□□□ -0.55
UPF2-204ENST00000460569 OTOP1Q7RTM1 612 aa11.61□□□□□ -0.55
UPF2-204ENST00000460569 IL31RAQ8NI17 732 aa11.61□□□□□ -0.55
UPF2-204ENST00000460569 RAET1EQ8TD07 263 aa11.61□□□□□ -0.55
UPF2-204ENST00000460569 TBCKQ8TEA7 893 aa11.61□□□□□ -0.55
UPF2-204ENST00000460569 MAML3Q96JK9 1138 aa11.61□□□□□ -0.55
UPF2-204ENST00000460569 MPHOSPH6Q99547 160 aaKnown RBP11.61□□□□□ -0.55
UPF2-204ENST00000460569 PDCD2LQ9BRP1 358 aa11.61□□□□□ -0.55
UPF2-204ENST00000460569 DDX49Q9Y6V7 483 aaKnown RBP11.61□□□□□ -0.55
UPF2-204ENST00000460569 ASB14A6NK59 587 aa11.6□□□□□ -0.55
UPF2-204ENST00000460569 B4DLN1 442 aa11.6□□□□□ -0.55
UPF2-204ENST00000460569 NR3C2P08235 984 aa11.6□□□□□ -0.55
UPF2-204ENST00000460569 ZSCAN22P10073 491 aaPredicted RBP11.6□□□□□ -0.55
UPF2-204ENST00000460569 MYCLP12524 364 aaPredicted RBP11.6□□□□□ -0.55
UPF2-204ENST00000460569 XRCC5P13010 732 aaKnown RBP11.6□□□□□ -0.55
UPF2-204ENST00000460569 U2AF2P26368 475 aaKnown RBP eCLIP11.6□□□□□ -0.55
UPF2-204ENST00000460569 CCND2P30279 289 aa11.6□□□□□ -0.55
UPF2-204ENST00000460569 DDIT3P35638 169 aa11.6□□□□□ -0.55
UPF2-204ENST00000460569 PRMT2P55345 433 aa11.6□□□□□ -0.55
UPF2-204ENST00000460569 ARHGAP4P98171 946 aa11.6□□□□□ -0.55
UPF2-204ENST00000460569 PDE4DQ08499 809 aa11.6□□□□□ -0.55
UPF2-204ENST00000460569 RESTQ13127 1097 aa11.6□□□□□ -0.55
UPF2-204ENST00000460569 IRF5Q13568 498 aa11.6□□□□□ -0.55
UPF2-204ENST00000460569 CCL14Q16627 93 aa11.6□□□□□ -0.55
UPF2-204ENST00000460569 ARMCX2Q7L311 632 aa11.6□□□□□ -0.55
UPF2-204ENST00000460569 BRAPQ7Z569 592 aa11.6□□□□□ -0.55
UPF2-204ENST00000460569 ZNF467Q7Z7K2 595 aaPredicted RBP11.6□□□□□ -0.55
UPF2-204ENST00000460569 LOC102724159A0A0B4J2E5 919 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 BRD1O95696 1058 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 F13A1P00488 732 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 ATP2B1P20020 1258 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 EDNRBP24530 442 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 NUCB2P80303 420 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 PWP2Q15269 919 aaKnown RBP11.59□□□□□ -0.55
UPF2-204ENST00000460569 PCNX4Q63HM2 1172 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 OLFML2BQ68BL8 750 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 CTU1Q7Z7A3 348 aaKnown RBP11.59□□□□□ -0.55
UPF2-204ENST00000460569 NEK8Q86SG6 692 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 TRIB2Q92519 343 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
UPF2-204ENST00000460569 IWS1Q96ST2 819 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 TINF2Q9BSI4 451 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 FLRT1Q9NZU1 646 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 CIZ1Q9ULV3 898 aaPredicted RBP11.59□□□□□ -0.55
UPF2-204ENST00000460569 NOL7Q9UMY1 257 aaKnown RBP11.59□□□□□ -0.55
UPF2-204ENST00000460569 PTCH2Q9Y6C5 1203 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 SYNGAP1Q96PV0 1343 aa11.59□□□□□ -0.55
UPF2-204ENST00000460569 ADCY3O60266 1144 aa11.58□□□□□ -0.56
UPF2-204ENST00000460569 ELNP15502 786 aa11.58□□□□□ -0.56
UPF2-204ENST00000460569 CYP2C19P33261 490 aa11.58□□□□□ -0.56
UPF2-204ENST00000460569 ZNF76P36508 570 aa11.58□□□□□ -0.56
UPF2-204ENST00000460569 STXBP2Q15833 593 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms