RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 MCTP2Q6DN12 878 aa13.5□□□□□ -0.25
TRAPPC12-212ENST00000457845 BICD2Q8TD16 824 aa13.5□□□□□ -0.25
TRAPPC12-212ENST00000457845 NSUN6Q8TEA1 469 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-212ENST00000457845 IWS1Q96ST2 819 aa13.5□□□□□ -0.25
TRAPPC12-212ENST00000457845 RMDN3Q96TC7 470 aa13.5□□□□□ -0.25
TRAPPC12-212ENST00000457845 PXMP2Q9NR77 195 aa13.5□□□□□ -0.25
TRAPPC12-212ENST00000457845 GJB4Q9NTQ9 266 aa13.5□□□□□ -0.25
TRAPPC12-212ENST00000457845 PCDHA4Q9UN74 947 aa13.5□□□□□ -0.25
TRAPPC12-212ENST00000457845 ASB14A6NK59 587 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 SNAI1O95863 264 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 HMGCRP04035 888 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 ELNP15502 786 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 GJB2P29033 226 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 NLRP5P59047 1200 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 UBE2SQ16763 222 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 MAP3K21Q5TCX8 1036 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 KRT40Q6A162 431 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 BLIDQ8IZY5 108 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 FAM184AQ8NB25 1140 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 FBXO18Q8NFZ0 1043 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 PDCD2LQ9BRP1 358 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 KATNBL1Q9H079 304 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 KCNJ14Q9UNX9 436 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 SMC3Q9UQE7 1217 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 KIF3AQ9Y496 699 aa13.49□□□□□ -0.25
TRAPPC12-212ENST00000457845 B4DLN1 442 aa13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 MMP1P03956 469 aa13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 PGM5Q15124 567 aa13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 ARMCX2Q7L311 632 aa13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 FCHSD1Q86WN1 690 aa13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 REXO1Q8N1G1 1221 aaKnown RBP13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 CRYGNQ8WXF5 182 aa13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 ARMC5Q96C12 935 aa13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 C8orf76Q96K31 380 aa13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 MCOLN1Q9GZU1 580 aa13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 BIN2Q9UBW5 565 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 NRBP1Q9UHY1 535 aa13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 PCDHA6Q9UN73 950 aa13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 PCDHA8Q9Y5H6 950 aa13.48□□□□□ -0.25
TRAPPC12-212ENST00000457845 DOCK5Q9H7D0 1870 aa13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 SPDYE3A6NKU9 549 aa13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 NR3C2P08235 984 aa13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 CYP2C19P33261 490 aa13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 CACNB2Q08289 660 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 TRIM32Q13049 653 aa13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 ARHGEF16Q5VV41 709 aa13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 MFSD14CQ5VZR4 134 aa13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 VSIG10LQ86VR7 867 aa13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 TNFRSF25Q93038 417 aa13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 MPHOSPH6Q99547 160 aaKnown RBP13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 ANO3Q9BYT9 981 aa13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 ABHD16BQ9H3Z7 469 aa13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 TMEM260Q9NX78 707 aa13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC12-212ENST00000457845 KIAA0100Q14667 2235 aaKnown RBP13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 INHAP05111 366 aa13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 ZNF865P0CJ78 1059 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 CYBAP13498 195 aa13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 EIF2AK2P19525 551 aaKnown RBP13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 SREBF1P36956 1147 aa13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 TRIM29Q14134 588 aa13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 SLC9C1Q4G0N8 1177 aa13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 COL13A1Q5TAT6 717 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 JAKMIP3Q5VZ66 844 aa13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 PCNX4Q63HM2 1172 aa13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 XRRA1Q6P2D8 792 aa13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 IL31RAQ8NI17 732 aa13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 RASGRP4Q8TDF6 673 aa13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 OXER1Q8TDS5 423 aa13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 SH3TC2Q8TF17 1288 aa13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 MYH15Q9Y2K3 1946 aa13.46□□□□□ -0.25
TRAPPC12-212ENST00000457845 WDR81Q562E7 1941 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 RBM47A0AV96 593 aaKnown RBP13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 BTBD18B2RXH4 712 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 EDIL3O43854 480 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 STAM2O75886 525 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 CYP3A4P08684 503 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 PRKAR2AP13861 404 aaKnown RBP13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 KRT2P35908 639 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 MRPS9P82933 396 aaKnown RBP13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 ACVR2BQ13705 512 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 BECN1Q14457 450 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 STXBP2Q15833 593 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 LARP1BQ659C4 914 aaKnown RBP13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 TAPT1Q6NXT6 567 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 DIS3L2Q8IYB7 885 aaKnown RBP13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 TRPV1Q8NER1 839 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 ZNF333Q96JL9 665 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 PGBD1Q96JS3 809 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 EHMT1Q9H9B1 1298 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 VTA1Q9NP79 307 aa13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 DDX49Q9Y6V7 483 aaKnown RBP13.45□□□□□ -0.26
TRAPPC12-212ENST00000457845 CENPFP49454 3210 aa13.44□□□□□ -0.26
TRAPPC12-212ENST00000457845 EIF3JO75822 258 aaKnown RBP13.44□□□□□ -0.26
TRAPPC12-212ENST00000457845 RGS20O76081 388 aa13.44□□□□□ -0.26
TRAPPC12-212ENST00000457845 PDCP20941 246 aa13.44□□□□□ -0.26
TRAPPC12-212ENST00000457845 U2AF2P26368 475 aaKnown RBP eCLIP13.44□□□□□ -0.262e-8■■■■□ 20.2
TRAPPC12-212ENST00000457845 CCND2P30279 289 aa13.44□□□□□ -0.26
TRAPPC12-212ENST00000457845 UBXN2AP68543 259 aa13.44□□□□□ -0.26
TRAPPC12-212ENST00000457845 GUCY1B3Q02153 619 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms