RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 GNRH1P01148 92 aa16.14■□□□□ 0.17
LINC00887-204ENST00000456816 HSPA8P11142 646 aaKnown RBP16.14■□□□□ 0.17
LINC00887-204ENST00000456816 CLK2P49760 499 aaKnown RBP16.14■□□□□ 0.17
LINC00887-204ENST00000456816 UBXN2AP68543 259 aa16.14■□□□□ 0.17
LINC00887-204ENST00000456816 GHRHRQ02643 423 aa16.14■□□□□ 0.17
LINC00887-204ENST00000456816 PRKCZQ05513 592 aa16.14■□□□□ 0.17
LINC00887-204ENST00000456816 NPY5RQ15761 445 aa16.14■□□□□ 0.17
LINC00887-204ENST00000456816 APBA2Q99767 749 aa16.14■□□□□ 0.17
LINC00887-204ENST00000456816 MTMR6Q9Y217 621 aa16.14■□□□□ 0.17
LINC00887-204ENST00000456816 PLXNB2O15031 1838 aa16.13■□□□□ 0.17
LINC00887-204ENST00000456816 DNAJC25-GNG10A0A024R161 153 aa16.13■□□□□ 0.17
LINC00887-204ENST00000456816 MYCLP12524 364 aaPredicted RBP16.13■□□□□ 0.17
LINC00887-204ENST00000456816 FLT3LGP49771 235 aa16.13■□□□□ 0.17
LINC00887-204ENST00000456816 ALDH5A1P51649 535 aaPredicted RBP16.13■□□□□ 0.17
LINC00887-204ENST00000456816 LBX1P52954 281 aa16.13■□□□□ 0.17
LINC00887-204ENST00000456816 NOSTRINQ8IVI9 506 aa16.13■□□□□ 0.17
LINC00887-204ENST00000456816 FAM133AQ8N9E0 248 aa16.13■□□□□ 0.17
LINC00887-204ENST00000456816 DNERQ8NFT8 737 aa16.13■□□□□ 0.17
LINC00887-204ENST00000456816 RAET1EQ8TD07 263 aa16.13■□□□□ 0.17
LINC00887-204ENST00000456816 PXMP2Q9NR77 195 aa16.13■□□□□ 0.17
LINC00887-204ENST00000456816 SRRDQ9UH36 339 aa16.13■□□□□ 0.17
LINC00887-204ENST00000456816 GABRQQ9UN88 632 aa16.13■□□□□ 0.17
LINC00887-204ENST00000456816 TRIM17Q9Y577 477 aa16.13■□□□□ 0.17
LINC00887-204ENST00000456816 SOWAHBA6NEL2 793 aa16.12■□□□□ 0.17
LINC00887-204ENST00000456816 ASB14A6NK59 587 aa16.12■□□□□ 0.17
LINC00887-204ENST00000456816 KIF28PB7ZC32 967 aa16.12■□□□□ 0.17
LINC00887-204ENST00000456816 ZSCAN22P10073 491 aaPredicted RBP16.12■□□□□ 0.17
LINC00887-204ENST00000456816 CCND2P30279 289 aa16.12■□□□□ 0.17
LINC00887-204ENST00000456816 ZNF76P36508 570 aa16.12■□□□□ 0.17
LINC00887-204ENST00000456816 PDE4DQ08499 809 aa16.12■□□□□ 0.17
LINC00887-204ENST00000456816 INF2Q27J81 1249 aa16.12■□□□□ 0.17
LINC00887-204ENST00000456816 ZNF792Q3KQV3 632 aa16.12■□□□□ 0.17
LINC00887-204ENST00000456816 TBCKQ8TEA7 893 aa16.12■□□□□ 0.17
LINC00887-204ENST00000456816 GJD2Q9UKL4 321 aa16.12■□□□□ 0.17
LINC00887-204ENST00000456816 NOL7Q9UMY1 257 aaKnown RBP16.12■□□□□ 0.17
LINC00887-204ENST00000456816 SMCHD1A6NHR9 2005 aa16.12■□□□□ 0.17
LINC00887-204ENST00000456816 M0R2N6 131 aa16.11■□□□□ 0.17
LINC00887-204ENST00000456816 ATP2B1P20020 1258 aa16.11■□□□□ 0.17
LINC00887-204ENST00000456816 U2AF2P26368 475 aaKnown RBP eCLIP16.11■□□□□ 0.17
LINC00887-204ENST00000456816 NUCB2P80303 420 aa16.11■□□□□ 0.17
LINC00887-204ENST00000456816 ARHGAP4P98171 946 aa16.11■□□□□ 0.17
LINC00887-204ENST00000456816 PKP1Q13835 747 aa16.11■□□□□ 0.17
LINC00887-204ENST00000456816 PGM5Q15124 567 aa16.11■□□□□ 0.17
LINC00887-204ENST00000456816 BRAPQ7Z569 592 aa16.11■□□□□ 0.17
LINC00887-204ENST00000456816 NPLOC4Q8TAT6 608 aa16.11■□□□□ 0.17
LINC00887-204ENST00000456816 TNFRSF25Q93038 417 aa16.11■□□□□ 0.17
LINC00887-204ENST00000456816 MAML3Q96JK9 1138 aa16.11■□□□□ 0.17
LINC00887-204ENST00000456816 IWS1Q96ST2 819 aa16.11■□□□□ 0.17
LINC00887-204ENST00000456816 PDCD2LQ9BRP1 358 aa16.11■□□□□ 0.17
LINC00887-204ENST00000456816 DIS3Q9Y2L1 958 aaKnown RBP16.11■□□□□ 0.17
LINC00887-204ENST00000456816 ZSWIM8A7E2V4 1837 aa16.1■□□□□ 0.17
LINC00887-204ENST00000456816 ZNF236Q9UL36 1845 aa16.1■□□□□ 0.17
LINC00887-204ENST00000456816 FAM205CA6NFA0 338 aa16.1■□□□□ 0.17
LINC00887-204ENST00000456816 NR3C2P08235 984 aa16.1■□□□□ 0.17
LINC00887-204ENST00000456816 HOXC6P09630 235 aa16.1■□□□□ 0.17
LINC00887-204ENST00000456816 SREBF1P36956 1147 aa16.1■□□□□ 0.17
LINC00887-204ENST00000456816 PRMT2P55345 433 aa16.1■□□□□ 0.17
LINC00887-204ENST00000456816 CAP1Q01518 475 aa16.1■□□□□ 0.17
LINC00887-204ENST00000456816 LETM2Q2VYF4 491 aa16.1■□□□□ 0.17
LINC00887-204ENST00000456816 OTOP1Q7RTM1 612 aa16.1■□□□□ 0.17
LINC00887-204ENST00000456816 NEK8Q86SG6 692 aa16.1■□□□□ 0.17
LINC00887-204ENST00000456816 USP6NLQ92738 828 aa16.1■□□□□ 0.17
LINC00887-204ENST00000456816 ZSCAN16Q9H4T2 348 aaPredicted RBP16.1■□□□□ 0.17
LINC00887-204ENST00000456816 CIZ1Q9ULV3 898 aaPredicted RBP16.1■□□□□ 0.17
LINC00887-204ENST00000456816 RPTORQ8N122 1335 aa16.1■□□□□ 0.17
LINC00887-204ENST00000456816 F13A1P00488 732 aa16.09■□□□□ 0.17
LINC00887-204ENST00000456816 XRCC5P13010 732 aaKnown RBP16.09■□□□□ 0.17
LINC00887-204ENST00000456816 RESTQ13127 1097 aa16.09■□□□□ 0.17
LINC00887-204ENST00000456816 STXBP2Q15833 593 aa16.09■□□□□ 0.17
LINC00887-204ENST00000456816 CCL14Q16627 93 aa16.09■□□□□ 0.17
LINC00887-204ENST00000456816 EARS2Q5JPH6 523 aaKnown RBP16.09■□□□□ 0.17
LINC00887-204ENST00000456816 MFSD14CQ5VZR4 134 aa16.09■□□□□ 0.17
LINC00887-204ENST00000456816 PCNX4Q63HM2 1172 aa16.09■□□□□ 0.17
LINC00887-204ENST00000456816 ARMCX2Q7L311 632 aa16.09■□□□□ 0.17
LINC00887-204ENST00000456816 ZNF467Q7Z7K2 595 aaPredicted RBP16.09■□□□□ 0.17
LINC00887-204ENST00000456816 TRMT44Q8IYL2 757 aaKnown RBP16.09■□□□□ 0.17
LINC00887-204ENST00000456816 IL31RAQ8NI17 732 aa16.09■□□□□ 0.17
LINC00887-204ENST00000456816 CHMP5Q9NZZ3 219 aa16.09■□□□□ 0.17
LINC00887-204ENST00000456816 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
LINC00887-204ENST00000456816 FRMPD4Q14CM0 1322 aa16.09■□□□□ 0.17
LINC00887-204ENST00000456816 MGAMO43451 1857 aa16.08■□□□□ 0.17
LINC00887-204ENST00000456816 LOC102724159A0A0B4J2E5 919 aa16.08■□□□□ 0.16
LINC00887-204ENST00000456816 ADCY3O60266 1144 aa16.08■□□□□ 0.16
LINC00887-204ENST00000456816 BRD1O95696 1058 aa16.08■□□□□ 0.16
LINC00887-204ENST00000456816 PWP2Q15269 919 aaKnown RBP16.08■□□□□ 0.16
LINC00887-204ENST00000456816 FOXD4L6Q3SYB3 417 aaPredicted RBP16.08■□□□□ 0.16
LINC00887-204ENST00000456816 OLFML2BQ68BL8 750 aa16.08■□□□□ 0.16
LINC00887-204ENST00000456816 XRRA1Q6P2D8 792 aa16.08■□□□□ 0.16
LINC00887-204ENST00000456816 FOXD4L3Q6VB84 417 aaPredicted RBP16.08■□□□□ 0.16
LINC00887-204ENST00000456816 EEPD1Q7L9B9 569 aa16.08■□□□□ 0.16
LINC00887-204ENST00000456816 ZFP91Q96JP5 570 aaPredicted RBP16.08■□□□□ 0.16
LINC00887-204ENST00000456816 FGD4Q96M96 766 aa16.08■□□□□ 0.16
LINC00887-204ENST00000456816 NAP1L4Q99733 375 aaKnown RBP16.08■□□□□ 0.16
LINC00887-204ENST00000456816 TINF2Q9BSI4 451 aa16.08■□□□□ 0.16
LINC00887-204ENST00000456816 RTEL1Q9NZ71 1219 aa16.08■□□□□ 0.16
LINC00887-204ENST00000456816 CNPY2Q9Y2B0 182 aa16.08■□□□□ 0.16
LINC00887-204ENST00000456816 ASTN1O14525 1302 aa16.08■□□□□ 0.16
LINC00887-204ENST00000456816 CCNT1O60563 726 aaKnown RBP16.07■□□□□ 0.16
LINC00887-204ENST00000456816 DDIT3P35638 169 aa16.07■□□□□ 0.16
LINC00887-204ENST00000456816 USP11P51784 963 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms