RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 TAAR1Q96RJ0 339 aa16.39■□□□□ 0.21
HMGXB4-204ENST00000455359 PXMP2Q9NR77 195 aa16.39■□□□□ 0.21
HMGXB4-204ENST00000455359 COL20A1Q9P218 1284 aa16.39■□□□□ 0.21
HMGXB4-204ENST00000455359 COL11A1P12107 1806 aaPredicted RBP16.38■□□□□ 0.21
HMGXB4-204ENST00000455359 RPTORQ8N122 1335 aa16.38■□□□□ 0.21
HMGXB4-204ENST00000455359 GJB2P29033 226 aa16.38■□□□□ 0.21
HMGXB4-204ENST00000455359 BLIDQ8IZY5 108 aa16.38■□□□□ 0.21
HMGXB4-204ENST00000455359 ARMC5Q96C12 935 aa16.38■□□□□ 0.21
HMGXB4-204ENST00000455359 SHISA4Q96DD7 197 aa16.38■□□□□ 0.21
HMGXB4-204ENST00000455359 PDCD2LQ9BRP1 358 aa16.38■□□□□ 0.21
HMGXB4-204ENST00000455359 ABHD16BQ9H3Z7 469 aa16.38■□□□□ 0.21
HMGXB4-204ENST00000455359 CNPY2Q9Y2B0 182 aa16.38■□□□□ 0.21
HMGXB4-204ENST00000455359 ASTN1O14525 1302 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 M0R2N6 131 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 EIF3JO75822 258 aaKnown RBP16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 STAM2O75886 525 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 MMP1P03956 469 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 HSP90AA1P07900 732 aaKnown RBP16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 UBXN2AP68543 259 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 NPY5RQ15761 445 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 STXBP2Q15833 593 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 CCL14Q16627 93 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 SLC9C1Q4G0N8 1177 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 MAP3K21Q5TCX8 1036 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 KRT40Q6A162 431 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 ARMCX2Q7L311 632 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 VSIG10LQ86VR7 867 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 VTA1Q9NP79 307 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 FLRT1Q9NZU1 646 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 PCDHA6Q9UN73 950 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 PCDHA8Q9Y5H6 950 aa16.37■□□□□ 0.21
HMGXB4-204ENST00000455359 NR3C2P08235 984 aa16.36■□□□□ 0.21
HMGXB4-204ENST00000455359 ELNP15502 786 aa16.36■□□□□ 0.21
HMGXB4-204ENST00000455359 KRT2P35908 639 aa16.36■□□□□ 0.21
HMGXB4-204ENST00000455359 PDE4DQ08499 809 aa16.36■□□□□ 0.21
HMGXB4-204ENST00000455359 UBE2SQ16763 222 aa16.36■□□□□ 0.21
HMGXB4-204ENST00000455359 PCNX4Q63HM2 1172 aa16.36■□□□□ 0.21
HMGXB4-204ENST00000455359 PURBQ96QR8 312 aaKnown RBP16.36■□□□□ 0.21
HMGXB4-204ENST00000455359 MCOLN1Q9GZU1 580 aa16.36■□□□□ 0.21
HMGXB4-204ENST00000455359 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.36■□□□□ 0.21
HMGXB4-204ENST00000455359 BIN2Q9UBW5 565 aaPredicted RBP16.36■□□□□ 0.21
HMGXB4-204ENST00000455359 KCNJ14Q9UNX9 436 aa16.36■□□□□ 0.21
HMGXB4-204ENST00000455359 INHAP05111 366 aa16.35■□□□□ 0.21
HMGXB4-204ENST00000455359 EIF2AK2P19525 551 aaKnown RBP16.35■□□□□ 0.21
HMGXB4-204ENST00000455359 CCND2P30279 289 aa16.35■□□□□ 0.21
HMGXB4-204ENST00000455359 SREBF1P36956 1147 aa16.35■□□□□ 0.21
HMGXB4-204ENST00000455359 PGM5Q15124 567 aa16.35■□□□□ 0.21
HMGXB4-204ENST00000455359 KRT25Q7Z3Z0 450 aa16.35■□□□□ 0.21
HMGXB4-204ENST00000455359 ANO3Q9BYT9 981 aa16.35■□□□□ 0.21
HMGXB4-204ENST00000455359 FOXP1Q9H334 677 aaPredicted RBP16.35■□□□□ 0.21
HMGXB4-204ENST00000455359 CASP8AP2Q9UKL3 1982 aa16.34■□□□□ 0.21
HMGXB4-204ENST00000455359 SNAI1O95863 264 aaPredicted RBP16.34■□□□□ 0.21
HMGXB4-204ENST00000455359 CYP3A4P08684 503 aa16.34■□□□□ 0.21
HMGXB4-204ENST00000455359 PRKAR2AP13861 404 aaKnown RBP16.34■□□□□ 0.21
HMGXB4-204ENST00000455359 CAPN2P17655 700 aa16.34■□□□□ 0.21
HMGXB4-204ENST00000455359 CYP2C19P33261 490 aa16.34■□□□□ 0.21
HMGXB4-204ENST00000455359 ANP32AP39687 249 aaKnown RBP16.34■□□□□ 0.21
HMGXB4-204ENST00000455359 ACVR2BQ13705 512 aa16.34■□□□□ 0.21
HMGXB4-204ENST00000455359 JAKMIP3Q5VZ66 844 aa16.34■□□□□ 0.21
HMGXB4-204ENST00000455359 LARP1BQ659C4 914 aaKnown RBP16.34■□□□□ 0.21
HMGXB4-204ENST00000455359 DIS3L2Q8IYB7 885 aaKnown RBP16.34■□□□□ 0.21
HMGXB4-204ENST00000455359 H3BQV1 296 aa16.33■□□□□ 0.2
HMGXB4-204ENST00000455359 DTNBO60941 627 aa16.33■□□□□ 0.2
HMGXB4-204ENST00000455359 CYBAP13498 195 aa16.33■□□□□ 0.2
HMGXB4-204ENST00000455359 USP11P51784 963 aa16.33■□□□□ 0.2
HMGXB4-204ENST00000455359 CACNB2Q08289 660 aaPredicted RBP16.33■□□□□ 0.2
HMGXB4-204ENST00000455359 NONOQ15233 471 aaKnown RBP eCLIP16.33■□□□□ 0.2
HMGXB4-204ENST00000455359 IFFO2Q5TF58 517 aa16.33■□□□□ 0.2
HMGXB4-204ENST00000455359 KCNV1Q6PIU1 500 aa16.33■□□□□ 0.2
HMGXB4-204ENST00000455359 CRYGNQ8WXF5 182 aa16.33■□□□□ 0.2
HMGXB4-204ENST00000455359 ZNF333Q96JL9 665 aa16.33■□□□□ 0.2
HMGXB4-204ENST00000455359 HMX1Q9NP08 348 aaPredicted RBP16.33■□□□□ 0.2
HMGXB4-204ENST00000455359 GJB4Q9NTQ9 266 aa16.33■□□□□ 0.2
HMGXB4-204ENST00000455359 TMEM260Q9NX78 707 aa16.33■□□□□ 0.2
HMGXB4-204ENST00000455359 CCDC194A0A1B0GVG4 234 aa16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 RBM47A0AV96 593 aaKnown RBP16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 MSCO60682 206 aa16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 ZNF865P0CJ78 1059 aaPredicted RBP16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 CIITAP33076 1130 aa16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 ARHGAP4P98171 946 aa16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 GNPTABQ3T906 1256 aa16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 IQSEC1Q6DN90 963 aa16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 SH3TC2Q8TF17 1288 aa16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 TNFRSF25Q93038 417 aa16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 CDHR1Q96JP9 859 aa16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 INPP4AQ96PE3 977 aaPredicted RBP16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 NAP1L4Q99733 375 aaKnown RBP16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 KATNBL1Q9H079 304 aa16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 MGAMO43451 1857 aa16.32■□□□□ 0.2
HMGXB4-204ENST00000455359 BTBD18B2RXH4 712 aa16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 MAFGO15525 162 aa16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 TGFB3P10600 412 aa16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 MYCLP12524 364 aaPredicted RBP16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 U2AF2P26368 475 aaKnown RBP eCLIP16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 MOXD1Q6UVY6 613 aa16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 NIPA1Q7RTP0 329 aa16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 NLRX1Q86UT6 975 aa16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 RASGRP4Q8TDF6 673 aa16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 OXER1Q8TDS5 423 aa16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 SCFD2Q8WU76 684 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms