RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 POLR3EQ9NVU0 708 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 LTBP2Q14767 1821 aa12.39□□□□□ -0.43
DDX39A-203ENST00000454233 PNMA6FA0A0J9YX94 578 aa12.39□□□□□ -0.43
DDX39A-203ENST00000454233 CCDC69A6NI79 296 aa12.39□□□□□ -0.43
DDX39A-203ENST00000454233 DDAH1O94760 285 aa12.39□□□□□ -0.43
DDX39A-203ENST00000454233 TXNP10599 105 aaKnown RBP12.39□□□□□ -0.43
DDX39A-203ENST00000454233 PTGS1P23219 599 aa12.39□□□□□ -0.43
DDX39A-203ENST00000454233 ITGA7Q13683 1181 aa12.39□□□□□ -0.43
DDX39A-203ENST00000454233 TTLL4Q14679 1199 aa12.39□□□□□ -0.43
DDX39A-203ENST00000454233 STXBP2Q15833 593 aa12.39□□□□□ -0.43
DDX39A-203ENST00000454233 TMEM63BQ5T3F8 832 aa12.39□□□□□ -0.43
DDX39A-203ENST00000454233 GPR153Q6NV75 609 aa12.39□□□□□ -0.43
DDX39A-203ENST00000454233 ZNF654Q8IZM8 581 aa12.39□□□□□ -0.43
DDX39A-203ENST00000454233 PIGSQ96S52 555 aa12.39□□□□□ -0.43
DDX39A-203ENST00000454233 LY9Q9HBG7 655 aa12.39□□□□□ -0.43
DDX39A-203ENST00000454233 GPHNQ9NQX3 736 aaPredicted RBP12.39□□□□□ -0.43
DDX39A-203ENST00000454233 MAP3K20Q9NYL2 800 aaKnown RBP12.39□□□□□ -0.43
DDX39A-203ENST00000454233 SH2B2O14492 632 aaPredicted RBP12.38□□□□□ -0.43
DDX39A-203ENST00000454233 PPP1R11O60927 126 aaPredicted RBP12.38□□□□□ -0.43
DDX39A-203ENST00000454233 CALM1P0DP23 149 aa12.38□□□□□ -0.43
DDX39A-203ENST00000454233 CALM2P0DP24 149 aa12.38□□□□□ -0.43
DDX39A-203ENST00000454233 CALM3P0DP25 149 aa12.38□□□□□ -0.43
DDX39A-203ENST00000454233 EIF2AK2P19525 551 aaKnown RBP12.38□□□□□ -0.43
DDX39A-203ENST00000454233 GNAQP50148 359 aa12.38□□□□□ -0.43
DDX39A-203ENST00000454233 HSD17B4P51659 736 aa12.38□□□□□ -0.43
DDX39A-203ENST00000454233 FPGSQ05932 587 aa12.38□□□□□ -0.43
DDX39A-203ENST00000454233 FAM126BQ8IXS8 530 aa12.38□□□□□ -0.43
DDX39A-203ENST00000454233 LZTS2Q9BRK4 669 aa12.38□□□□□ -0.43
DDX39A-203ENST00000454233 COL20A1Q9P218 1284 aa12.38□□□□□ -0.43
DDX39A-203ENST00000454233 TBX21Q9UL17 535 aa12.38□□□□□ -0.43
DDX39A-203ENST00000454233 GCOM1H8Y6P7 765 aaPredicted RBP12.37□□□□□ -0.43
DDX39A-203ENST00000454233 OPLAHO14841 1288 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 CYTH3O43739 400 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 KPNA6O60684 536 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 EIF3JO75822 258 aaKnown RBP12.37□□□□□ -0.43
DDX39A-203ENST00000454233 TIMP1P01033 207 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 NR3C2P08235 984 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 MYL3P08590 195 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 POLR2MP0CAP2 368 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 ITGB8P26012 769 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 LIFRP42702 1097 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 GHRHRQ02643 423 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 SHHQ15465 462 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 SLC35G1Q2M3R5 365 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 SEPT14Q6ZU15 432 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 SLC43A3Q8NBI5 491 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 PIBF1Q8WXW3 757 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 RRP36Q96EU6 259 aaKnown RBP12.37□□□□□ -0.43
DDX39A-203ENST00000454233 MYL10Q9BUA6 226 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 SPZ1Q9BXG8 430 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 PXMP2Q9NR77 195 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 SEC63Q9UGP8 760 aaKnown RBP12.37□□□□□ -0.43
DDX39A-203ENST00000454233 DNAH12Q6ZR08 3092 aa12.37□□□□□ -0.43
DDX39A-203ENST00000454233 RANBP2P49792 3224 aaKnown RBP12.37□□□□□ -0.43
DDX39A-203ENST00000454233 BAZ2BQ9UIF8 2168 aaKnown RBP12.36□□□□□ -0.43
DDX39A-203ENST00000454233 GH1P01241 217 aa12.36□□□□□ -0.43
DDX39A-203ENST00000454233 CD4P01730 458 aa12.36□□□□□ -0.43
DDX39A-203ENST00000454233 SMARCA1P28370 1054 aa12.36□□□□□ -0.43
DDX39A-203ENST00000454233 HOXA13P31271 388 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-203ENST00000454233 PSMC6P62333 389 aa12.36□□□□□ -0.43
DDX39A-203ENST00000454233 PURAQ00577 322 aaKnown RBP12.36□□□□□ -0.43
DDX39A-203ENST00000454233 C9orf50Q5SZB4 431 aa12.36□□□□□ -0.43
DDX39A-203ENST00000454233 SYNE3Q6ZMZ3 975 aa12.36□□□□□ -0.43
DDX39A-203ENST00000454233 TMEM199Q8N511 208 aa12.36□□□□□ -0.43
DDX39A-203ENST00000454233 COPS5Q92905 334 aa12.36□□□□□ -0.43
DDX39A-203ENST00000454233 NEK1Q96PY6 1258 aa12.36□□□□□ -0.43
DDX39A-203ENST00000454233 PDCD2LQ9BRP1 358 aa12.36□□□□□ -0.43
DDX39A-203ENST00000454233 MTG1Q9BT17 334 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-203ENST00000454233 SLC12A7Q9Y666 1083 aa12.36□□□□□ -0.43
DDX39A-203ENST00000454233 A6NJR5 290 aa12.35□□□□□ -0.43
DDX39A-203ENST00000454233 ARIH2O95376 493 aa12.35□□□□□ -0.43
DDX39A-203ENST00000454233 MYCLP12524 364 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-203ENST00000454233 PPIGQ13427 754 aaKnown RBP eCLIP12.35□□□□□ -0.433e-7■■□□□ 13
DDX39A-203ENST00000454233 KRT32Q14532 448 aa12.35□□□□□ -0.43
DDX39A-203ENST00000454233 LY6KQ17RY6 165 aa12.35□□□□□ -0.43
DDX39A-203ENST00000454233 MFSD5Q6N075 450 aa12.35□□□□□ -0.43
DDX39A-203ENST00000454233 CCDC62Q6P9F0 684 aa12.35□□□□□ -0.43
DDX39A-203ENST00000454233 FCHSD1Q86WN1 690 aa12.35□□□□□ -0.43
DDX39A-203ENST00000454233 DEFB123Q8N688 67 aa12.35□□□□□ -0.43
DDX39A-203ENST00000454233 RNPC3Q96LT9 517 aaKnown RBP12.35□□□□□ -0.43
DDX39A-203ENST00000454233 LRRC2Q9BYS8 371 aa12.35□□□□□ -0.43
DDX39A-203ENST00000454233 PPP1R12CQ9BZL4 782 aa12.35□□□□□ -0.43
DDX39A-203ENST00000454233 MRVI1Q9Y6F6 885 aa12.35□□□□□ -0.43
DDX39A-203ENST00000454233 GRIN2DO15399 1336 aa12.35□□□□□ -0.43
DDX39A-203ENST00000454233 SUPT20HL2P0C7V6 817 aa12.34□□□□□ -0.43
DDX39A-203ENST00000454233 RXRAP19793 462 aa12.34□□□□□ -0.43
DDX39A-203ENST00000454233 CCND2P30279 289 aa12.34□□□□□ -0.43
DDX39A-203ENST00000454233 PGM5Q15124 567 aa12.34□□□□□ -0.43
DDX39A-203ENST00000454233 TSGA10IPQ3SY00 556 aa12.34□□□□□ -0.43
DDX39A-203ENST00000454233 FAM47CQ5HY64 1035 aa12.34□□□□□ -0.43
DDX39A-203ENST00000454233 KCNV1Q6PIU1 500 aa12.34□□□□□ -0.43
DDX39A-203ENST00000454233 SGMS1Q86VZ5 419 aa12.34□□□□□ -0.43
DDX39A-203ENST00000454233 AFG1LQ8WV93 481 aa12.34□□□□□ -0.43
DDX39A-203ENST00000454233 CUL5Q93034 780 aa12.34□□□□□ -0.43
DDX39A-203ENST00000454233 TRPV6Q9H1D0 765 aa12.34□□□□□ -0.43
DDX39A-203ENST00000454233 ALDH8A1Q9H2A2 487 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-203ENST00000454233 HIPK3Q9H422 1215 aa12.34□□□□□ -0.43
DDX39A-203ENST00000454233 B4GALT4O60513 344 aa12.33□□□□□ -0.44
DDX39A-203ENST00000454233 PLEKHA8P1O95397 391 aa12.33□□□□□ -0.44
DDX39A-203ENST00000454233 HMGB1P09429 215 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms