RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 PLAGL2Q9UPG8 496 aa21.72■■□□□ 1.07
LMBR1-213ENST00000454132 TCP1P17987 556 aaKnown RBP21.72■■□□□ 1.07
LMBR1-213ENST00000454132 EHHADHQ08426 723 aa21.72■■□□□ 1.07
LMBR1-213ENST00000454132 HLTFQ14527 1009 aaKnown RBP eCLIP21.72■■□□□ 1.07
LMBR1-213ENST00000454132 B4GALNT4Q76KP1 1039 aa21.72■■□□□ 1.07
LMBR1-213ENST00000454132 KIAA0895Q8NCT3 520 aa21.72■■□□□ 1.07
LMBR1-213ENST00000454132 TRIM9Q9C026 710 aa21.72■■□□□ 1.07
LMBR1-213ENST00000454132 PALMO75781 387 aa21.71■■□□□ 1.07
LMBR1-213ENST00000454132 TMOD1P28289 359 aa21.71■■□□□ 1.07
LMBR1-213ENST00000454132 SKOR1P84550 965 aa21.71■■□□□ 1.07
LMBR1-213ENST00000454132 PPP2R5BQ15173 497 aa21.71■■□□□ 1.07
LMBR1-213ENST00000454132 SPRED3Q2MJR0 410 aa21.71■■□□□ 1.07
LMBR1-213ENST00000454132 CACNA2D4Q7Z3S7 1137 aa21.71■■□□□ 1.07
LMBR1-213ENST00000454132 NDST4Q9H3R1 872 aa21.71■■□□□ 1.07
LMBR1-213ENST00000454132 EVA1CP58658 441 aa21.71■■□□□ 1.07
LMBR1-213ENST00000454132 PYM1Q9BRP8 204 aaKnown RBP21.71■■□□□ 1.07
LMBR1-213ENST00000454132 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.71■■□□□ 1.07
LMBR1-213ENST00000454132 KCNB1Q14721 858 aa21.7■■□□□ 1.06
LMBR1-213ENST00000454132 ARL6IP4Q66PJ3 421 aaKnown RBP21.7■■□□□ 1.06
LMBR1-213ENST00000454132 ZNF662Q6ZS27 426 aa21.7■■□□□ 1.06
LMBR1-213ENST00000454132 DHTKD1Q96HY7 919 aaPredicted RBP21.7■■□□□ 1.06
LMBR1-213ENST00000454132 PCDHA6Q9UN73 950 aa21.7■■□□□ 1.06
LMBR1-213ENST00000454132 PLAAQ9Y263 795 aa21.7■■□□□ 1.06
LMBR1-213ENST00000454132 PCDHA8Q9Y5H6 950 aa21.7■■□□□ 1.06
LMBR1-213ENST00000454132 CCNT1O60563 726 aaKnown RBP21.7■■□□□ 1.06
LMBR1-213ENST00000454132 CALM1P0DP23 149 aa21.7■■□□□ 1.06
LMBR1-213ENST00000454132 CALM2P0DP24 149 aa21.7■■□□□ 1.06
LMBR1-213ENST00000454132 CALM3P0DP25 149 aa21.7■■□□□ 1.06
LMBR1-213ENST00000454132 TRAPPC10P48553 1259 aa21.7■■□□□ 1.06
LMBR1-213ENST00000454132 SETQ01105 290 aaPredicted RBP21.7■■□□□ 1.06
LMBR1-213ENST00000454132 NLRP14Q86W24 1093 aa21.7■■□□□ 1.06
LMBR1-213ENST00000454132 IFT20Q8IY31 132 aa21.7■■□□□ 1.06
LMBR1-213ENST00000454132 IQCKQ8N0W5 287 aa21.7■■□□□ 1.06
LMBR1-213ENST00000454132 EPN3Q9H201 632 aa21.7■■□□□ 1.06
LMBR1-213ENST00000454132 IGHMBP2P38935 993 aaKnown RBP21.69■■□□□ 1.06
LMBR1-213ENST00000454132 VWA3BQ502W6 1294 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 CEP57Q86XR8 500 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 PACSIN1Q9BY11 444 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 PCDHA4Q9UN74 947 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 PPP1R37O75864 691 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 DDAH1O94760 285 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 PTGISQ16647 500 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 CHADLQ6NUI6 762 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 AEBP2Q6ZN18 517 aaPredicted RBP21.69■■□□□ 1.06
LMBR1-213ENST00000454132 RETREG2Q8NC44 543 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 MYCBPAPQ8TBZ2 947 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 CFAP221Q4G0U5 840 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 DYNLL2Q96FJ2 89 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 ANAPC4Q9UJX5 808 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 SIK3Q9Y2K2 1263 aa21.69■■□□□ 1.06
LMBR1-213ENST00000454132 PARP4Q9UKK3 1724 aaKnown RBP21.68■■□□□ 1.06
LMBR1-213ENST00000454132 EPB41P11171 864 aaKnown RBP21.68■■□□□ 1.06
LMBR1-213ENST00000454132 GSCP56915 257 aaPredicted RBP21.68■■□□□ 1.06
LMBR1-213ENST00000454132 NOX5Q96PH1 765 aa21.68■■□□□ 1.06
LMBR1-213ENST00000454132 ERGIC2Q96RQ1 377 aa21.68■■□□□ 1.06
LMBR1-213ENST00000454132 VAT1LQ9HCJ6 419 aa21.68■■□□□ 1.06
LMBR1-213ENST00000454132 BICDL2A1A5D9 508 aa21.68■■□□□ 1.06
LMBR1-213ENST00000454132 PDHBP11177 359 aa21.68■■□□□ 1.06
LMBR1-213ENST00000454132 CYP19A1P11511 503 aaPredicted RBP21.68■■□□□ 1.06
LMBR1-213ENST00000454132 USP8P40818 1118 aa21.68■■□□□ 1.06
LMBR1-213ENST00000454132 CAVIN3Q969G5 261 aa21.68■■□□□ 1.06
LMBR1-213ENST00000454132 MTA3Q9BTC8 594 aa21.68■■□□□ 1.06
LMBR1-213ENST00000454132 COL18A1P39060 1754 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 TIAM2Q8IVF5 1701 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 DISP2A7MBM2 1401 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 USP17L3A6NCW0 530 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 USP17L4A6NCW7 530 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 USP17L1Q7RTZ2 530 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 CCDC13Q8IYE1 715 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 TBC1D7Q9P0N9 293 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 RAD51CO43502 376 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 USP17L8P0C7I0 530 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 ATP6V1AP38606 617 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 SLC35G1Q2M3R5 365 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 KIRREL3Q8IZU9 778 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 TCP11L1Q9NUJ3 509 aa21.67■■□□□ 1.06
LMBR1-213ENST00000454132 FRMD3A2A2Y4 597 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 KLRC1P26715 233 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 KLRK1P26718 216 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 MDH1P40925 334 aaKnown RBP21.66■■□□□ 1.06
LMBR1-213ENST00000454132 TXKP42681 527 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 QPCTQ16769 361 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 KDM7AQ6ZMT4 941 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 FAM114A1Q8IWE2 563 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 ZKSCAN4Q969J2 545 aaPredicted RBP21.66■■□□□ 1.06
LMBR1-213ENST00000454132 NKX1-1Q15270 411 aaPredicted RBP21.66■■□□□ 1.06
LMBR1-213ENST00000454132 RCSD1Q6JBY9 416 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 AP1M1Q9BXS5 423 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 KLC4Q9NSK0 619 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 TFAP4Q01664 338 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 PAK2Q13177 524 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 E2F5Q15329 346 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 ODF2Q5BJF6 829 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 NOC3LQ8WTT2 800 aaKnown RBP21.66■■□□□ 1.06
LMBR1-213ENST00000454132 ATP6V1G3Q96LB4 118 aa21.66■■□□□ 1.06
LMBR1-213ENST00000454132 CCDC40Q4G0X9 1142 aa21.65■■□□□ 1.06
LMBR1-213ENST00000454132 GJA10Q969M2 543 aa21.65■■□□□ 1.06
LMBR1-213ENST00000454132 CCDC47Q96A33 483 aaKnown RBP21.65■■□□□ 1.06
LMBR1-213ENST00000454132 CCDC114Q96M63 670 aa21.65■■□□□ 1.06
LMBR1-213ENST00000454132 SCLT1Q96NL6 688 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms