RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 B4GALNT3Q6L9W6 998 aa13.7□□□□□ -0.22
GARNL3-210ENST00000453030 RPUSD2Q8IZ73 545 aaKnown RBP13.7□□□□□ -0.22
GARNL3-210ENST00000453030 ESR2Q92731 530 aa13.7□□□□□ -0.22
GARNL3-210ENST00000453030 MTG1Q9BT17 334 aaPredicted RBP13.7□□□□□ -0.22
GARNL3-210ENST00000453030 UBA5Q9GZZ9 404 aa13.7□□□□□ -0.22
GARNL3-210ENST00000453030 RNF41Q9H4P4 317 aaPredicted RBP13.7□□□□□ -0.22
GARNL3-210ENST00000453030 THEGQ9P2T0 379 aa13.7□□□□□ -0.22
GARNL3-210ENST00000453030 PNMA2Q9UL42 364 aa13.7□□□□□ -0.22
GARNL3-210ENST00000453030 BDP1A6H8Y1 2624 aa13.7□□□□□ -0.22
GARNL3-210ENST00000453030 BAZ2BQ9UIF8 2168 aaKnown RBP13.69□□□□□ -0.22
GARNL3-210ENST00000453030 SUPT20HL2P0C7V6 817 aa13.69□□□□□ -0.22
GARNL3-210ENST00000453030 PCP11498 1178 aaKnown RBP13.69□□□□□ -0.22
GARNL3-210ENST00000453030 EDNRBP24530 442 aa13.69□□□□□ -0.22
GARNL3-210ENST00000453030 MFAP1P55081 439 aaKnown RBP13.69□□□□□ -0.22
GARNL3-210ENST00000453030 TTLL4Q14679 1199 aa13.69□□□□□ -0.22
GARNL3-210ENST00000453030 CDC37Q16543 378 aaPredicted RBP13.69□□□□□ -0.22
GARNL3-210ENST00000453030 NBPF20Q3BBV1 942 aa13.69□□□□□ -0.22
GARNL3-210ENST00000453030 BRDTQ58F21 947 aaPredicted RBP13.69□□□□□ -0.22
GARNL3-210ENST00000453030 GPATCH4Q5T3I0 446 aaKnown RBP13.69□□□□□ -0.22
GARNL3-210ENST00000453030 MICALL1Q8N3F8 863 aa13.69□□□□□ -0.22
GARNL3-210ENST00000453030 SCFD2Q8WU76 684 aa13.69□□□□□ -0.22
GARNL3-210ENST00000453030 VWCEQ96DN2 955 aa13.69□□□□□ -0.22
GARNL3-210ENST00000453030 TTC14Q96N46 770 aa13.69□□□□□ -0.22
GARNL3-210ENST00000453030 NKRFO15226 690 aaKnown RBP eCLIP13.68□□□□□ -0.22
GARNL3-210ENST00000453030 KDM4AO75164 1064 aa13.68□□□□□ -0.22
GARNL3-210ENST00000453030 ARIH2O95376 493 aa13.68□□□□□ -0.22
GARNL3-210ENST00000453030 TXNP10599 105 aaKnown RBP13.68□□□□□ -0.22
GARNL3-210ENST00000453030 ATP2A2P16615 1042 aaKnown RBP13.68□□□□□ -0.22
GARNL3-210ENST00000453030 SDSP20132 328 aa13.68□□□□□ -0.22
GARNL3-210ENST00000453030 CWC27Q6UX04 472 aaKnown RBP13.68□□□□□ -0.22
GARNL3-210ENST00000453030 PNMA1Q8ND90 353 aa13.68□□□□□ -0.22
GARNL3-210ENST00000453030 DNERQ8NFT8 737 aa13.68□□□□□ -0.22
GARNL3-210ENST00000453030 A6NJR5 290 aa13.67□□□□□ -0.22
GARNL3-210ENST00000453030 B4E1Z4 1266 aa13.67□□□□□ -0.22
GARNL3-210ENST00000453030 ZNF213O14771 459 aa13.67□□□□□ -0.22
GARNL3-210ENST00000453030 DHX16O60231 1041 aaKnown RBP13.67□□□□□ -0.22
GARNL3-210ENST00000453030 PFKMP08237 780 aa13.67□□□□□ -0.22
GARNL3-210ENST00000453030 IQCA1Q86XH1 822 aa13.67□□□□□ -0.22
GARNL3-210ENST00000453030 TICAM2Q86XR7 235 aa13.67□□□□□ -0.22
GARNL3-210ENST00000453030 KAT14Q9H8E8 782 aa13.67□□□□□ -0.22
GARNL3-210ENST00000453030 DIAPH3Q9NSV4 1193 aa13.67□□□□□ -0.22
GARNL3-210ENST00000453030 NOD1Q9Y239 953 aa13.67□□□□□ -0.22
GARNL3-210ENST00000453030 PCDHA11Q9Y5I1 949 aa13.67□□□□□ -0.22
GARNL3-210ENST00000453030 DOCK5Q9H7D0 1870 aa13.67□□□□□ -0.22
GARNL3-210ENST00000453030 BRWD1Q9NSI6 2320 aa13.67□□□□□ -0.22
GARNL3-210ENST00000453030 ABCB11O95342 1321 aa13.66□□□□□ -0.22
GARNL3-210ENST00000453030 B4DLN1 442 aa13.66□□□□□ -0.22
GARNL3-210ENST00000453030 CA3P07451 260 aa13.66□□□□□ -0.22
GARNL3-210ENST00000453030 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
GARNL3-210ENST00000453030 NFRKBQ6P4R8 1299 aa13.66□□□□□ -0.22
GARNL3-210ENST00000453030 SEPT14Q6ZU15 432 aa13.66□□□□□ -0.22
GARNL3-210ENST00000453030 CHST3Q7LGC8 479 aa13.66□□□□□ -0.22
GARNL3-210ENST00000453030 DGKHQ86XP1 1220 aa13.66□□□□□ -0.22
GARNL3-210ENST00000453030 SMC5Q8IY18 1101 aa13.66□□□□□ -0.22
GARNL3-210ENST00000453030 ADGRF4Q8IZF3 695 aa13.66□□□□□ -0.22
GARNL3-210ENST00000453030 TBC1D5Q92609 795 aa13.66□□□□□ -0.22
GARNL3-210ENST00000453030 COL20A1Q9P218 1284 aa13.66□□□□□ -0.22
GARNL3-210ENST00000453030 TNFRSF10AO00220 468 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 KPNA6O60684 536 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 MMP3P08254 477 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 ACTN1P12814 892 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 LY6KQ17RY6 165 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 QRICH1Q2TAL8 776 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 ASPRV1Q53RT3 343 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 TMEM67Q5HYA8 995 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 CHD1LQ86WJ1 897 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 PLEKHM2Q8IWE5 1019 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 ENAHQ8N8S7 591 aaPredicted RBP13.65□□□□□ -0.22
GARNL3-210ENST00000453030 RETREG2Q8NC44 543 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 SYTL5Q8TDW5 730 aaPredicted RBP13.65□□□□□ -0.22
GARNL3-210ENST00000453030 AFG1LQ8WV93 481 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 ATXN2LQ8WWM7 1075 aaKnown RBP13.65□□□□□ -0.22
GARNL3-210ENST00000453030 TAAR1Q96RJ0 339 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 FTOQ9C0B1 505 aaKnown RBP eCLIP13.65□□□□□ -0.22
GARNL3-210ENST00000453030 CERS4Q9HA82 394 aa13.65□□□□□ -0.22
GARNL3-210ENST00000453030 SIP14410 1827 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 MICAL3Q7RTP6 2002 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 IQCF3P0C7M6 154 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 EIF2AK2P19525 551 aaKnown RBP13.64□□□□□ -0.23
GARNL3-210ENST00000453030 RFC2P35250 354 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 ARHGAP1Q07960 439 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 BFSP2Q13515 415 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 PTGISQ16647 500 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 CCDC62Q6P9F0 684 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 RGS22Q8NE09 1264 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 IL27Q8NEV9 243 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 ADAMTS19Q8TE59 1207 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 ASB2Q96Q27 587 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 ZSCAN10Q96SZ4 725 aaPredicted RBP13.64□□□□□ -0.23
GARNL3-210ENST00000453030 SLC9A7Q96T83 725 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 RMDN3Q96TC7 470 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 RWDD1Q9H446 243 aaPredicted RBP13.64□□□□□ -0.23
GARNL3-210ENST00000453030 VAT1LQ9HCJ6 419 aa13.64□□□□□ -0.23
GARNL3-210ENST00000453030 RFXAPO00287 272 aa13.63□□□□□ -0.23
GARNL3-210ENST00000453030 GH1P01241 217 aa13.63□□□□□ -0.23
GARNL3-210ENST00000453030 PARP1P09874 1014 aaKnown RBP13.63□□□□□ -0.23
GARNL3-210ENST00000453030 MRPS5P82675 430 aaKnown RBP13.63□□□□□ -0.23
GARNL3-210ENST00000453030 NUCB1Q02818 461 aa13.63□□□□□ -0.23
GARNL3-210ENST00000453030 PTPN11Q06124 597 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms