RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 POTEB2H3BUK9 544 aa13.27□□□□□ -0.29
SCN9A-204ENST00000452182 SYT1P21579 422 aa13.27□□□□□ -0.29
SCN9A-204ENST00000452182 HOXA13P31271 388 aaPredicted RBP13.27□□□□□ -0.29
SCN9A-204ENST00000452182 PRMT2P55345 433 aa13.27□□□□□ -0.29
SCN9A-204ENST00000452182 SAFBQ15424 915 aaKnown RBP eCLIP13.27□□□□□ -0.297e-6■■■□□ 18.2
SCN9A-204ENST00000452182 ZNF792Q3KQV3 632 aa13.27□□□□□ -0.29
SCN9A-204ENST00000452182 SLC5A4Q9NY91 659 aa13.27□□□□□ -0.29
SCN9A-204ENST00000452182 DAXXQ9UER7 740 aaPredicted RBP13.27□□□□□ -0.29
SCN9A-204ENST00000452182 COBLO75128 1261 aa13.26□□□□□ -0.29
SCN9A-204ENST00000452182 XRCC5P13010 732 aaKnown RBP13.26□□□□□ -0.29
SCN9A-204ENST00000452182 KRT2P35908 639 aa13.26□□□□□ -0.29
SCN9A-204ENST00000452182 RGS2P41220 211 aa13.26□□□□□ -0.29
SCN9A-204ENST00000452182 UBE2SQ16763 222 aa13.26□□□□□ -0.29
SCN9A-204ENST00000452182 ZNF467Q7Z7K2 595 aaPredicted RBP13.26□□□□□ -0.29
SCN9A-204ENST00000452182 DPP9Q86TI2 863 aa13.26□□□□□ -0.29
SCN9A-204ENST00000452182 FOXP1Q9H334 677 aaPredicted RBP13.26□□□□□ -0.29
SCN9A-204ENST00000452182 COL20A1Q9P218 1284 aa13.26□□□□□ -0.29
SCN9A-204ENST00000452182 ADD3Q9UEY8 706 aaKnown RBP13.26□□□□□ -0.29
SCN9A-204ENST00000452182 SRRDQ9UH36 339 aa13.26□□□□□ -0.29
SCN9A-204ENST00000452182 PCDHA6Q9UN73 950 aa13.26□□□□□ -0.29
SCN9A-204ENST00000452182 PCDHA8Q9Y5H6 950 aa13.26□□□□□ -0.29
SCN9A-204ENST00000452182 FRMPD4Q14CM0 1322 aa13.26□□□□□ -0.29
SCN9A-204ENST00000452182 SPDYE3A6NKU9 549 aa13.25□□□□□ -0.29
SCN9A-204ENST00000452182 H3BQV1 296 aa13.25□□□□□ -0.29
SCN9A-204ENST00000452182 PGK2P07205 417 aa13.25□□□□□ -0.29
SCN9A-204ENST00000452182 IRF5Q13568 498 aa13.25□□□□□ -0.29
SCN9A-204ENST00000452182 IFFO2Q5TF58 517 aa13.25□□□□□ -0.29
SCN9A-204ENST00000452182 DIS3L2Q8IYB7 885 aaKnown RBP13.25□□□□□ -0.29
SCN9A-204ENST00000452182 MSL3Q8N5Y2 521 aaKnown RBP13.25□□□□□ -0.29
SCN9A-204ENST00000452182 NSUN6Q8TEA1 469 aaKnown RBP13.25□□□□□ -0.29
SCN9A-204ENST00000452182 TNFRSF25Q93038 417 aa13.25□□□□□ -0.29
SCN9A-204ENST00000452182 APBA2Q99767 749 aa13.25□□□□□ -0.29
SCN9A-204ENST00000452182 BIN2Q9UBW5 565 aaPredicted RBP13.25□□□□□ -0.29
SCN9A-204ENST00000452182 RPTORQ8N122 1335 aa13.25□□□□□ -0.29
SCN9A-204ENST00000452182 SOWAHBA6NEL2 793 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 BTBD18B2RXH4 712 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 ADAMTS3O15072 1205 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 STX6O43752 255 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 U2AF2P26368 475 aaKnown RBP eCLIP13.24□□□□□ -0.29
SCN9A-204ENST00000452182 FLT3LGP49771 235 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 FOSBP53539 338 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 GUCY1B3Q02153 619 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 CNTN2Q02246 1040 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 PRKCZQ05513 592 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 MAMDC4Q6UXC1 1216 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 KRT25Q7Z3Z0 450 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 FCHSD1Q86WN1 690 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 OXER1Q8TDS5 423 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 FGD4Q96M96 766 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 IPO9Q96P70 1041 aaKnown RBP13.24□□□□□ -0.29
SCN9A-204ENST00000452182 TAAR1Q96RJ0 339 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 IWS1Q96ST2 819 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 RMDN3Q96TC7 470 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 EHMT1Q9H9B1 1298 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 PXMP2Q9NR77 195 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 ASTN1O14525 1302 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 B4DLN1 442 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 IGHA2P01877 340 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 DDIT3P35638 169 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 ALDH5A1P51649 535 aaPredicted RBP13.24□□□□□ -0.29
SCN9A-204ENST00000452182 LBX1P52954 281 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 JAKMIP3Q5VZ66 844 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 OLFML2BQ68BL8 750 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 OTOP1Q7RTM1 612 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 TRMT44Q8IYL2 757 aaKnown RBP13.24□□□□□ -0.29
SCN9A-204ENST00000452182 MORC4Q8TE76 937 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 CRYGNQ8WXF5 182 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 MAML3Q96JK9 1138 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 MPHOSPH6Q99547 160 aaKnown RBP13.24□□□□□ -0.29
SCN9A-204ENST00000452182 ANO3Q9BYT9 981 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 TMEM260Q9NX78 707 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 GABRQQ9UN88 632 aa13.24□□□□□ -0.29
SCN9A-204ENST00000452182 ASB14A6NK59 587 aa13.23□□□□□ -0.29
SCN9A-204ENST00000452182 EDNRBP24530 442 aa13.23□□□□□ -0.29
SCN9A-204ENST00000452182 SREBF1P36956 1147 aa13.23□□□□□ -0.29
SCN9A-204ENST00000452182 NR5A1Q13285 461 aa13.23□□□□□ -0.29
SCN9A-204ENST00000452182 ARHGEF16Q5VV41 709 aa13.23□□□□□ -0.29
SCN9A-204ENST00000452182 XRRA1Q6P2D8 792 aa13.23□□□□□ -0.29
SCN9A-204ENST00000452182 NOSTRINQ8IVI9 506 aa13.23□□□□□ -0.29
SCN9A-204ENST00000452182 NPLOC4Q8TAT6 608 aa13.23□□□□□ -0.29
SCN9A-204ENST00000452182 RASGRP4Q8TDF6 673 aa13.23□□□□□ -0.29
SCN9A-204ENST00000452182 PURBQ96QR8 312 aaKnown RBP13.23□□□□□ -0.29
SCN9A-204ENST00000452182 PDCD2LQ9BRP1 358 aa13.23□□□□□ -0.29
SCN9A-204ENST00000452182 MTMR6Q9Y217 621 aa13.23□□□□□ -0.29
SCN9A-204ENST00000452182 TRIM17Q9Y577 477 aa13.23□□□□□ -0.29
SCN9A-204ENST00000452182 LRRC37A2A6NM11 1700 aa13.22□□□□□ -0.29
SCN9A-204ENST00000452182 CCDC194A0A1B0GVG4 234 aa13.22□□□□□ -0.29
SCN9A-204ENST00000452182 VPS37CA5D8V6 355 aaPredicted RBP13.22□□□□□ -0.29
SCN9A-204ENST00000452182 PYGBP11216 843 aa13.22□□□□□ -0.29
SCN9A-204ENST00000452182 CYP2B6P20813 491 aa13.22□□□□□ -0.29
SCN9A-204ENST00000452182 PGM5Q15124 567 aa13.22□□□□□ -0.29
SCN9A-204ENST00000452182 NONOQ15233 471 aaKnown RBP eCLIP13.22□□□□□ -0.29
SCN9A-204ENST00000452182 PXYLP1Q8TE99 480 aa13.22□□□□□ -0.29
SCN9A-204ENST00000452182 FARP1Q9Y4F1 1045 aaPredicted RBP13.22□□□□□ -0.29
SCN9A-204ENST00000452182 MYH7BA7E2Y1 1941 aa13.22□□□□□ -0.29
SCN9A-204ENST00000452182 SYNGAP1Q96PV0 1343 aa13.22□□□□□ -0.29
SCN9A-204ENST00000452182 KIF28PB7ZC32 967 aa13.21□□□□□ -0.29
SCN9A-204ENST00000452182 STAM2O75886 525 aa13.21□□□□□ -0.29
SCN9A-204ENST00000452182 NR3C2P08235 984 aa13.21□□□□□ -0.29
SCN9A-204ENST00000452182 CYP3A4P08684 503 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms