RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 PFKFB3Q16875 520 aaPredicted RBP10.21□□□□□ -0.77
COL8A1-203ENST00000452013 ANO1Q5XXA6 986 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 MCTP2Q6DN12 878 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 TAPT1Q6NXT6 567 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 EEPD1Q7L9B9 569 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 SHISA4Q96DD7 197 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 PAWRQ96IZ0 340 aaKnown RBP10.21□□□□□ -0.77
COL8A1-203ENST00000452013 HTATIP2Q9BUP3 242 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 SLC26A6Q9BXS9 759 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 KATNBL1Q9H079 304 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 AP5M1Q9H0R1 490 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 EHMT1Q9H9B1 1298 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 NCOA5Q9HCD5 579 aaKnown RBP10.21□□□□□ -0.77
COL8A1-203ENST00000452013 PXMP2Q9NR77 195 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 BARHL2Q9NY43 387 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 COL20A1Q9P218 1284 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 TPCN1Q9ULQ1 816 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 Q9Y3F1 56 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 CNTNAP5Q8WYK1 1306 aa10.21□□□□□ -0.78
COL8A1-203ENST00000452013 NID2Q14112 1375 aa10.21□□□□□ -0.78
COL8A1-203ENST00000452013 RBM47A0AV96 593 aaKnown RBP10.2□□□□□ -0.78
COL8A1-203ENST00000452013 SPDYE3A6NKU9 549 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 DNM1LO00429 736 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 ASTN1O14525 1302 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 MEIS2O14770 477 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 NKRFO15226 690 aaKnown RBP eCLIP10.2□□□□□ -0.78
COL8A1-203ENST00000452013 STAM2O75886 525 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 FOSP01100 380 aaPredicted RBP10.2□□□□□ -0.78
COL8A1-203ENST00000452013 MYCLP12524 364 aaPredicted RBP10.2□□□□□ -0.78
COL8A1-203ENST00000452013 EIF2AK2P19525 551 aaKnown RBP10.2□□□□□ -0.78
COL8A1-203ENST00000452013 GNA11P29992 359 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 CCND2P30279 289 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 ADCYAP1R1P41586 468 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 TTLL4Q14679 1199 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 RABEP1Q15276 862 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 WWC2Q6AWC2 1192 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 XRRA1Q6P2D8 792 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 KCNV1Q6PIU1 500 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 USP17L6PQ6QN14 398 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 VSIG10LQ86VR7 867 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 SCFD2Q8WU76 684 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 GPKOWQ92917 476 aaPredicted RBP eCLIP10.2□□□□□ -0.78
COL8A1-203ENST00000452013 PHKBQ93100 1093 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 ZSCAN31Q96LW9 406 aaPredicted RBP10.2□□□□□ -0.78
COL8A1-203ENST00000452013 PDCD2LQ9BRP1 358 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 TSEN34Q9BSV6 310 aaKnown RBP10.2□□□□□ -0.78
COL8A1-203ENST00000452013 WDR11Q9BZH6 1224 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 C11orf49Q9H6J7 331 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 C6orf50Q9HD87 102 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 RIC8AQ9NPQ8 531 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 LIMCH1Q9UPQ0 1083 aa10.2□□□□□ -0.78
COL8A1-203ENST00000452013 MYH4Q9Y623 1939 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 ZSWIM8A7E2V4 1837 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 STXBP3O00186 592 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 DYNC1LI2O43237 492 aaPredicted RBP10.19□□□□□ -0.78
COL8A1-203ENST00000452013 ZEB2O60315 1214 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 DEXIO95424 95 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 TXNP10599 105 aaKnown RBP10.19□□□□□ -0.78
COL8A1-203ENST00000452013 XBP1P17861 261 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 ADCY7P51828 1080 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 GJA9P57773 515 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 SCRN1Q12765 414 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 PGM5Q15124 567 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 LRRC41Q15345 812 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 PKN1Q16512 942 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 DUSP28Q4G0W2 176 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 BRDTQ58F21 947 aaPredicted RBP10.19□□□□□ -0.78
COL8A1-203ENST00000452013 GJC2Q5T442 439 aaPredicted RBP10.19□□□□□ -0.78
COL8A1-203ENST00000452013 SEPT14Q6ZU15 432 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 UBE2Q1Q7Z7E8 422 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 FBXO16Q8IX29 292 aaPredicted RBP10.19□□□□□ -0.78
COL8A1-203ENST00000452013 FAM177A1Q8N128 213 aaPredicted RBP10.19□□□□□ -0.78
COL8A1-203ENST00000452013 PCSK9Q8NBP7 692 aaKnown RBP10.19□□□□□ -0.78
COL8A1-203ENST00000452013 CCDC148Q8NFR7 591 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 BICD2Q8TD16 824 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 SH3GLB2Q9NR46 395 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 PDGFCQ9NRA1 345 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 PCDHA6Q9UN73 950 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 PCDHA8Q9Y5H6 950 aa10.19□□□□□ -0.78
COL8A1-203ENST00000452013 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-203ENST00000452013 ESYT2A0FGR8 921 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 ST18O60284 1047 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 PGK1P00558 417 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 C6orf222P0C671 652 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-203ENST00000452013 TGFB3P10600 412 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 SMPD1P17405 629 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 NLRP5P59047 1200 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 NKX3-2P78367 333 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 ME3Q16798 604 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 GNPTABQ3T906 1256 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 GNASQ5JWF2 1037 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 NLRX1Q86UT6 975 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 KLHDC9Q8NEP7 349 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 WASF1Q92558 559 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 DPF3Q92784 378 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 KIF2CQ99661 725 aa10.18□□□□□ -0.78
COL8A1-203ENST00000452013 SENP6Q9GZR1 1112 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-203ENST00000452013 GNEQ9Y223 722 aaKnown RBP10.18□□□□□ -0.78
COL8A1-203ENST00000452013 DDX49Q9Y6V7 483 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms