RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 DDAH1O94760 285 aa18.61■□□□□ 0.57
SGCE-208ENST00000450385 CD4P01730 458 aa18.61■□□□□ 0.57
SGCE-208ENST00000450385 CALM1P0DP23 149 aa18.61■□□□□ 0.57
SGCE-208ENST00000450385 CALM2P0DP24 149 aa18.61■□□□□ 0.57
SGCE-208ENST00000450385 CALM3P0DP25 149 aa18.61■□□□□ 0.57
SGCE-208ENST00000450385 ITGA7Q13683 1181 aa18.61■□□□□ 0.57
SGCE-208ENST00000450385 MFSD5Q6N075 450 aa18.61■□□□□ 0.57
SGCE-208ENST00000450385 KCNV1Q6PIU1 500 aa18.61■□□□□ 0.57
SGCE-208ENST00000450385 STOX1Q6ZVD7 989 aa18.61■□□□□ 0.57
SGCE-208ENST00000450385 FAM126BQ8IXS8 530 aa18.61■□□□□ 0.57
SGCE-208ENST00000450385 PURBQ96QR8 312 aaKnown RBP18.61■□□□□ 0.57
SGCE-208ENST00000450385 CPVLQ9H3G5 476 aa18.61■□□□□ 0.57
SGCE-208ENST00000450385 GPHNQ9NQX3 736 aaPredicted RBP18.61■□□□□ 0.57
SGCE-208ENST00000450385 PCDHA1Q9Y5I3 950 aa18.61■□□□□ 0.57
SGCE-208ENST00000450385 A6NJR5 290 aa18.6■□□□□ 0.57
SGCE-208ENST00000450385 SUPT20HL2P0C7V6 817 aa18.6■□□□□ 0.57
SGCE-208ENST00000450385 BEX3Q00994 111 aa18.6■□□□□ 0.57
SGCE-208ENST00000450385 FPGSQ05932 587 aa18.6■□□□□ 0.57
SGCE-208ENST00000450385 CXCL17Q6UXB2 119 aa18.6■□□□□ 0.57
SGCE-208ENST00000450385 TXNP10599 105 aaKnown RBP18.59■□□□□ 0.57
SGCE-208ENST00000450385 TGFB3P10600 412 aa18.59■□□□□ 0.57
SGCE-208ENST00000450385 PPIGQ13427 754 aaKnown RBP eCLIP18.59■□□□□ 0.57
SGCE-208ENST00000450385 TSGA10IPQ3SY00 556 aa18.59■□□□□ 0.57
SGCE-208ENST00000450385 ARHGEF16Q5VV41 709 aa18.59■□□□□ 0.57
SGCE-208ENST00000450385 TMEM199Q8N511 208 aa18.59■□□□□ 0.57
SGCE-208ENST00000450385 OR6J1Q8NGC5 347 aa18.59■□□□□ 0.57
SGCE-208ENST00000450385 CTCFLQ8NI51 663 aaPredicted RBP18.59■□□□□ 0.57
SGCE-208ENST00000450385 LRCH3Q96II8 777 aa18.59■□□□□ 0.57
SGCE-208ENST00000450385 TAAR1Q96RJ0 339 aa18.59■□□□□ 0.57
SGCE-208ENST00000450385 MTG1Q9BT17 334 aaPredicted RBP18.59■□□□□ 0.57
SGCE-208ENST00000450385 SPZ1Q9BXG8 430 aa18.59■□□□□ 0.57
SGCE-208ENST00000450385 SLC27A2O14975 620 aa18.58■□□□□ 0.56
SGCE-208ENST00000450385 CFBP00751 764 aa18.58■□□□□ 0.56
SGCE-208ENST00000450385 ANTXR2P58335 489 aa18.58■□□□□ 0.56
SGCE-208ENST00000450385 SMAD3P84022 425 aaKnown RBP18.58■□□□□ 0.56
SGCE-208ENST00000450385 PTPN11Q06124 597 aaPredicted RBP18.58■□□□□ 0.56
SGCE-208ENST00000450385 SHHQ15465 462 aa18.58■□□□□ 0.56
SGCE-208ENST00000450385 CREB3L3Q68CJ9 461 aa18.58■□□□□ 0.56
SGCE-208ENST00000450385 NFRKBQ6P4R8 1299 aa18.58■□□□□ 0.56
SGCE-208ENST00000450385 CCDC62Q6P9F0 684 aa18.58■□□□□ 0.56
SGCE-208ENST00000450385 TEX2Q8IWB9 1127 aa18.58■□□□□ 0.56
SGCE-208ENST00000450385 EMID1Q96A84 441 aaPredicted RBP18.58■□□□□ 0.56
SGCE-208ENST00000450385 LY9Q9HBG7 655 aa18.58■□□□□ 0.56
SGCE-208ENST00000450385 ANO2Q9NQ90 1003 aa18.58■□□□□ 0.56
SGCE-208ENST00000450385 PXMP2Q9NR77 195 aa18.58■□□□□ 0.56
SGCE-208ENST00000450385 SCN10AQ9Y5Y9 1956 aa18.58■□□□□ 0.56
SGCE-208ENST00000450385 PRC1O43663 620 aa18.57■□□□□ 0.56
SGCE-208ENST00000450385 STAM2O75886 525 aa18.57■□□□□ 0.56
SGCE-208ENST00000450385 NR3C2P08235 984 aa18.57■□□□□ 0.56
SGCE-208ENST00000450385 IRX5P78411 483 aaPredicted RBP18.57■□□□□ 0.56
SGCE-208ENST00000450385 PURAQ00577 322 aaKnown RBP18.57■□□□□ 0.56
SGCE-208ENST00000450385 ZNF654Q8IZM8 581 aa18.57■□□□□ 0.56
SGCE-208ENST00000450385 TBC1D5Q92609 795 aa18.57■□□□□ 0.56
SGCE-208ENST00000450385 COL6A3P12111 3177 aa18.56■□□□□ 0.56
SGCE-208ENST00000450385 CCDC69A6NI79 296 aa18.56■□□□□ 0.56
SGCE-208ENST00000450385 GCOM1H8Y6P7 765 aaPredicted RBP18.56■□□□□ 0.56
SGCE-208ENST00000450385 GH1P01241 217 aa18.56■□□□□ 0.56
SGCE-208ENST00000450385 POLR2MP0CAP2 368 aa18.56■□□□□ 0.56
SGCE-208ENST00000450385 ITGB8P26012 769 aa18.56■□□□□ 0.56
SGCE-208ENST00000450385 KRT32Q14532 448 aa18.56■□□□□ 0.56
SGCE-208ENST00000450385 SGMS1Q86VZ5 419 aa18.56■□□□□ 0.56
SGCE-208ENST00000450385 DEFB123Q8N688 67 aa18.56■□□□□ 0.56
SGCE-208ENST00000450385 TAF6LQ9Y6J9 622 aa18.56■□□□□ 0.56
SGCE-208ENST00000450385 MYH7BA7E2Y1 1941 aa18.56■□□□□ 0.56
SGCE-208ENST00000450385 GRIN2DO15399 1336 aa18.55■□□□□ 0.56
SGCE-208ENST00000450385 TMEM265A0A087WTH1 108 aa18.55■□□□□ 0.56
SGCE-208ENST00000450385 OPLAHO14841 1288 aa18.55■□□□□ 0.56
SGCE-208ENST00000450385 CYTH3O43739 400 aa18.55■□□□□ 0.56
SGCE-208ENST00000450385 CDC45O75419 566 aa18.55■□□□□ 0.56
SGCE-208ENST00000450385 HMGB1P09429 215 aaKnown RBP18.55■□□□□ 0.56
SGCE-208ENST00000450385 LAMC2Q13753 1193 aa18.55■□□□□ 0.56
SGCE-208ENST00000450385 CHST3Q7LGC8 479 aa18.55■□□□□ 0.56
SGCE-208ENST00000450385 VSIG10LQ86VR7 867 aa18.55■□□□□ 0.56
SGCE-208ENST00000450385 RRP36Q96EU6 259 aaKnown RBP18.55■□□□□ 0.56
SGCE-208ENST00000450385 CCDC136Q96JN2 1154 aa18.55■□□□□ 0.56
SGCE-208ENST00000450385 PIGSQ96S52 555 aa18.55■□□□□ 0.56
SGCE-208ENST00000450385 PDCD2LQ9BRP1 358 aa18.55■□□□□ 0.56
SGCE-208ENST00000450385 ALDH8A1Q9H2A2 487 aaPredicted RBP18.55■□□□□ 0.56
SGCE-208ENST00000450385 COL20A1Q9P218 1284 aa18.55■□□□□ 0.56
SGCE-208ENST00000450385 DDX49Q9Y6V7 483 aaKnown RBP18.55■□□□□ 0.56
SGCE-208ENST00000450385 SH2B2O14492 632 aaPredicted RBP18.54■□□□□ 0.56
SGCE-208ENST00000450385 PPP1R11O60927 126 aaPredicted RBP18.54■□□□□ 0.56
SGCE-208ENST00000450385 CASTP20810 708 aaKnown RBP18.54■□□□□ 0.56
SGCE-208ENST00000450385 XRRA1Q6P2D8 792 aa18.54■□□□□ 0.56
SGCE-208ENST00000450385 PSRC1Q6PGN9 363 aaPredicted RBP18.54■□□□□ 0.56
SGCE-208ENST00000450385 SYNE3Q6ZMZ3 975 aa18.54■□□□□ 0.56
SGCE-208ENST00000450385 NFXL1Q6ZNB6 911 aa18.54■□□□□ 0.56
SGCE-208ENST00000450385 HOMER1Q86YM7 354 aa18.54■□□□□ 0.56
SGCE-208ENST00000450385 RPUSD2Q8IZ73 545 aaKnown RBP18.54■□□□□ 0.56
SGCE-208ENST00000450385 MTIF3Q9H2K0 278 aaKnown RBP18.54■□□□□ 0.56
SGCE-208ENST00000450385 HIPK3Q9H422 1215 aa18.54■□□□□ 0.56
SGCE-208ENST00000450385 SENP2Q9HC62 589 aa18.54■□□□□ 0.56
SGCE-208ENST00000450385 MTMR10Q9NXD2 777 aa18.54■□□□□ 0.56
SGCE-208ENST00000450385 SEC63Q9UGP8 760 aaKnown RBP18.54■□□□□ 0.56
SGCE-208ENST00000450385 DDX41Q9UJV9 622 aaKnown RBP18.54■□□□□ 0.56
SGCE-208ENST00000450385 SLC12A7Q9Y666 1083 aa18.54■□□□□ 0.56
SGCE-208ENST00000450385 PIK3CDO00329 1044 aa18.53■□□□□ 0.56
SGCE-208ENST00000450385 CCND2P30279 289 aa18.53■□□□□ 0.56
SGCE-208ENST00000450385 DGKDQ16760 1214 aa18.53■□□□□ 0.56
SGCE-208ENST00000450385 C9orf50Q5SZB4 431 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms