RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 GJA9P57773 515 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 RTP1P59025 263 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 RTN1Q16799 776 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 TMEM63BQ5T3F8 832 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 Q6ZUG5 572 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 CCDC82Q8N4S0 544 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 NSUN6Q8TEA1 469 aaKnown RBP13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 RMDN3Q96TC7 470 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 MAF1Q9H063 256 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 PRO3102Q9H379 93 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 GNEQ9Y223 722 aaKnown RBP13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 ATP11BQ9Y2G3 1177 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 CNTNAP5Q8WYK1 1306 aa13.8□□□□□ -0.2
LSP1P3-201ENST00000449530 A0A1W2PPC1 479 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 EPB41L2O43491 1005 aaKnown RBP13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 PSMA5P28066 241 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 SMARCA1P28370 1054 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 ACLYP53396 1101 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 BEX3Q00994 111 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 GHRHRQ02643 423 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 APOBRQ0VD83 1088 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 KCNA10Q16322 511 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 TRIM60Q495X7 471 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 ARHGEF16Q5VV41 709 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 KLHDC9Q8NEP7 349 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 BRF1Q92994 677 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 TSEN34Q9BSV6 310 aaKnown RBP13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 USP26Q9BXU7 913 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 AP5M1Q9H0R1 490 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 PXMP2Q9NR77 195 aa13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 RBM28Q9NW13 759 aaKnown RBP13.79□□□□□ -0.2
LSP1P3-201ENST00000449530 MOXD2PA6NHM9 499 aa13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 GCOM1H8Y6P7 765 aaPredicted RBP13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 CTAGE5O15320 804 aa13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 POLR2MP0CAP2 368 aa13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 SNX17Q15036 470 aa13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 PPP2R5BQ15173 497 aa13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 FSCN1Q16658 493 aaKnown RBP13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 GNASQ5JWF2 1037 aa13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 IQSEC1Q6DN90 963 aa13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 CCSAPQ6IQ19 270 aaPredicted RBP13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 SLC39A5Q6ZMH5 540 aa13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 FCHSD1Q86WN1 690 aa13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 PCSK9Q8NBP7 692 aaKnown RBP13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 SCFD2Q8WU76 684 aa13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 WDR11Q9BZH6 1224 aa13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 STARD7Q9NQZ5 370 aa13.78□□□□□ -0.2
LSP1P3-201ENST00000449530 RBM47A0AV96 593 aaKnown RBP13.77□□□□□ -0.21
LSP1P3-201ENST00000449530 DYNC1LI2O43237 492 aaPredicted RBP13.77□□□□□ -0.21
LSP1P3-201ENST00000449530 ASGR1P07306 291 aa13.77□□□□□ -0.21
LSP1P3-201ENST00000449530 METAP2P50579 478 aaKnown RBP eCLIP13.77□□□□□ -0.21
LSP1P3-201ENST00000449530 DUSP28Q4G0W2 176 aa13.77□□□□□ -0.21
LSP1P3-201ENST00000449530 SEPT14Q6ZU15 432 aa13.77□□□□□ -0.21
LSP1P3-201ENST00000449530 HEATR3Q7Z4Q2 680 aa13.77□□□□□ -0.21
LSP1P3-201ENST00000449530 GPKOWQ92917 476 aaPredicted RBP eCLIP13.77□□□□□ -0.21
LSP1P3-201ENST00000449530 LRCH3Q96II8 777 aa13.77□□□□□ -0.21
LSP1P3-201ENST00000449530 IWS1Q96ST2 819 aa13.77□□□□□ -0.21
LSP1P3-201ENST00000449530 MAP3K20Q9NYL2 800 aaKnown RBP13.77□□□□□ -0.21
LSP1P3-201ENST00000449530 NID2Q14112 1375 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 SOX1O00570 391 aaPredicted RBP13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 PQBP1O60828 265 aaKnown RBP13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 ARIH2O95376 493 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 NR3C2P08235 984 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 MYCLP12524 364 aaPredicted RBP13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 CDC27P30260 824 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 RCAN1P53805 252 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 NKX3-2P78367 333 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 TTLL4Q14679 1199 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 STXBP2Q15833 593 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 RUFY3Q7L099 469 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 SAMD3Q8N6K7 520 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 OR6J1Q8NGC5 347 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 IL31RAQ8NI17 732 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 SMARCC2Q8TAQ2 1214 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 COPS5Q92905 334 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 CUL5Q93034 780 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 GLT1D1Q96MS3 346 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 PDCD2LQ9BRP1 358 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 UPF3BQ9BZI7 483 aaKnown RBP13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 PRDM5Q9NQX1 630 aaPredicted RBP13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 UNC80Q8N2C7 3258 aa13.76□□□□□ -0.21
LSP1P3-201ENST00000449530 TXNP10599 105 aaKnown RBP13.75□□□□□ -0.21
LSP1P3-201ENST00000449530 FUT2Q10981 343 aa13.75□□□□□ -0.21
LSP1P3-201ENST00000449530 PGM5Q15124 567 aa13.75□□□□□ -0.21
LSP1P3-201ENST00000449530 WWC2Q6AWC2 1192 aa13.75□□□□□ -0.21
LSP1P3-201ENST00000449530 USP17L6PQ6QN14 398 aa13.75□□□□□ -0.21
LSP1P3-201ENST00000449530 CXCL17Q6UXB2 119 aa13.75□□□□□ -0.21
LSP1P3-201ENST00000449530 VTI1AQ96AJ9 217 aa13.75□□□□□ -0.21
LSP1P3-201ENST00000449530 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
LSP1P3-201ENST00000449530 FAM217BQ9NTX9 383 aaPredicted RBP13.75□□□□□ -0.21
LSP1P3-201ENST00000449530 Q9Y3F1 56 aa13.75□□□□□ -0.21
LSP1P3-201ENST00000449530 CYP46A1Q9Y6A2 500 aa13.75□□□□□ -0.21
LSP1P3-201ENST00000449530 DOCK5Q9H7D0 1870 aa13.75□□□□□ -0.21
LSP1P3-201ENST00000449530 MYH7BA7E2Y1 1941 aa13.74□□□□□ -0.21
LSP1P3-201ENST00000449530 FRMPD4Q14CM0 1322 aa13.74□□□□□ -0.21
LSP1P3-201ENST00000449530 A0A0U1RQG5 324 aaPredicted RBP13.74□□□□□ -0.21
LSP1P3-201ENST00000449530 NKRFO15226 690 aaKnown RBP eCLIP13.74□□□□□ -0.21
LSP1P3-201ENST00000449530 ZEB2O60315 1214 aa13.74□□□□□ -0.21
LSP1P3-201ENST00000449530 CCND2P30279 289 aa13.74□□□□□ -0.21
LSP1P3-201ENST00000449530 MAGEA10P43363 369 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms