RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 PPFIA4O75335 1185 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 CYP2D6P10635 497 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 KRT15P19012 456 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 CASP1P29466 404 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 TRIM28Q13263 835 aaKnown RBP11.41□□□□□ -0.58
CTC1-202ENST00000449476 PPP1R21Q6ZMI0 780 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 TMC4Q7Z404 712 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 ZNF579Q8NAF0 562 aaKnown RBP11.41□□□□□ -0.58
CTC1-202ENST00000449476 GLG1Q92896 1179 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 STIM2Q9P246 746 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 ZMYND10O75800 440 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 CYP27A1Q02318 531 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 ALX1Q15699 326 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 CCDC14Q49A88 953 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 NAA35Q5VZE5 725 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 ATG9AQ7Z3C6 839 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 THAP9Q9H5L6 903 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 CCPG1Q9ULG6 757 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 GOLGA8KD6RF30 607 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 DLATP10515 647 aaKnown RBP11.41□□□□□ -0.58
CTC1-202ENST00000449476 ARL1P40616 181 aaPredicted RBP11.41□□□□□ -0.58
CTC1-202ENST00000449476 UBXN2AP68543 259 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 GRAPQ13588 217 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 MCF2L2Q86YR7 1114 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 ENAHQ8N8S7 591 aaPredicted RBP11.41□□□□□ -0.58
CTC1-202ENST00000449476 TTC16Q8NEE8 873 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 GRAPLQ8TC17 118 aaPredicted RBP11.41□□□□□ -0.58
CTC1-202ENST00000449476 BCAS4Q8TDM0 211 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 OXER1Q8TDS5 423 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 DBNDD1Q9H9R9 158 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 MINPP1Q9UNW1 487 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 ZNF335Q9H4Z2 1342 aaPredicted RBP11.41□□□□□ -0.58
CTC1-202ENST00000449476 IFNB1P01574 187 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 VPS41P49754 854 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 LIG4P49917 911 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 CCDC144BQ3MJ40 725 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 VSIG1Q86XK7 387 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 PARD6BQ9BYG5 372 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 C1orf112Q9NSG2 853 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.4□□□□□ -0.58
CTC1-202ENST00000449476 IVNS1ABPQ9Y6Y0 642 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 CYP19A1P11511 503 aaPredicted RBP11.4□□□□□ -0.58
CTC1-202ENST00000449476 TCP11X2Q5H9J9 407 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 CCDC170Q8IYT3 715 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 KRT12Q99456 494 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 MTA3Q9BTC8 594 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 LRRIQ1Q96JM4 1722 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 MFAP3LO75121 409 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 GDF11O95390 407 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 CLCN6P51797 869 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 UBE2SQ16763 222 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 CAPS2Q9BXY5 557 aa11.4□□□□□ -0.58
CTC1-202ENST00000449476 CLRN2A0PK11 232 aa11.4□□□□□ -0.59
CTC1-202ENST00000449476 GSG1L2A8MUP6 293 aa11.4□□□□□ -0.59
CTC1-202ENST00000449476 EIF4A3P38919 411 aaKnown RBP11.4□□□□□ -0.59
CTC1-202ENST00000449476 NT5C2P49902 561 aa11.4□□□□□ -0.59
CTC1-202ENST00000449476 EXOSC10Q01780 885 aaKnown RBP11.4□□□□□ -0.59
CTC1-202ENST00000449476 CUL4BQ13620 913 aa11.4□□□□□ -0.59
CTC1-202ENST00000449476 HHATQ5VTY9 493 aa11.4□□□□□ -0.59
CTC1-202ENST00000449476 FYB2Q5VWT5 728 aa11.4□□□□□ -0.59
CTC1-202ENST00000449476 FAM186BQ8IYM0 893 aa11.4□□□□□ -0.59
CTC1-202ENST00000449476 GPR101Q96P66 508 aaPredicted RBP11.4□□□□□ -0.59
CTC1-202ENST00000449476 NDST4Q9H3R1 872 aa11.4□□□□□ -0.59
CTC1-202ENST00000449476 EMILIN3Q9NT22 766 aa11.4□□□□□ -0.59
CTC1-202ENST00000449476 UBN2Q6ZU65 1347 aa11.4□□□□□ -0.59
CTC1-202ENST00000449476 MEIS1O00470 390 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 AFPP02771 609 aaKnown RBP11.39□□□□□ -0.59
CTC1-202ENST00000449476 CHGBP05060 677 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 BMP3P12645 472 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 IRX3P78415 501 aaPredicted RBP11.39□□□□□ -0.59
CTC1-202ENST00000449476 GRM1Q13255 1194 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 FBXO38Q6PIJ6 1188 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 PNMA8AQ86V59 439 aaPredicted RBP11.39□□□□□ -0.59
CTC1-202ENST00000449476 NHEJ1Q9H9Q4 299 aaPredicted RBP11.39□□□□□ -0.59
CTC1-202ENST00000449476 TBC1D8O95759 1140 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 CFAP157Q5JU67 520 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 CC2D2BQ6DHV5 1058 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 SGMS1Q86VZ5 419 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 TRIM6Q9C030 488 aaPredicted RBP11.39□□□□□ -0.59
CTC1-202ENST00000449476 CLIC2O15247 247 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 CXCR5P32302 372 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 PDE6CP51160 858 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 PFKFB3Q16875 520 aaPredicted RBP11.39□□□□□ -0.59
CTC1-202ENST00000449476 CELF1Q92879 486 aaKnown RBP11.39□□□□□ -0.59
CTC1-202ENST00000449476 ABCA9Q8IUA7 1624 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 MYO3AQ8NEV4 1616 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 PPRC1Q5VV67 1664 aaKnown RBP11.39□□□□□ -0.59
CTC1-202ENST00000449476 PSMC2P35998 433 aaKnown RBP11.39□□□□□ -0.59
CTC1-202ENST00000449476 RCAN1P53805 252 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 SNX16P57768 344 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 MB21D1Q8N884 522 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 ANKRD42Q8N9B4 389 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 MGARPQ8TDB4 240 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 SH3RF3Q8TEJ3 882 aaPredicted RBP11.39□□□□□ -0.59
CTC1-202ENST00000449476 BPIFA3Q9BQP9 254 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 ZNF577Q9BSK1 485 aa11.39□□□□□ -0.59
CTC1-202ENST00000449476 OSBPL5Q9H0X9 879 aaPredicted RBP11.39□□□□□ -0.59
CTC1-202ENST00000449476 DHX36Q9H2U1 1008 aaKnown RBP11.39□□□□□ -0.59
CTC1-202ENST00000449476 DCP1AQ9NPI6 582 aaPredicted RBP11.39□□□□□ -0.59
CTC1-202ENST00000449476 ST7Q9NRC1 585 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms