RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 FCHSD1Q86WN1 690 aa16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 PHKBQ93100 1093 aa16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 IWS1Q96ST2 819 aa16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 RNF26Q9BY78 433 aaPredicted RBP16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 CRISPLD2Q9H0B8 497 aa16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 ASTN1O14525 1302 aa16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 KIAA0100Q14667 2235 aaKnown RBP16.14■□□□□ 0.17
GTF3C3-206ENST00000448539 PFKFB2O60825 505 aa16.13■□□□□ 0.17
GTF3C3-206ENST00000448539 EIF2AK2P19525 551 aaKnown RBP16.13■□□□□ 0.17
GTF3C3-206ENST00000448539 NTRK3Q16288 839 aa16.13■□□□□ 0.17
GTF3C3-206ENST00000448539 EEPD1Q7L9B9 569 aa16.13■□□□□ 0.17
GTF3C3-206ENST00000448539 MORC4Q8TE76 937 aa16.13■□□□□ 0.17
GTF3C3-206ENST00000448539 CCDC12Q8WUD4 166 aaPredicted RBP16.13■□□□□ 0.17
GTF3C3-206ENST00000448539 VTA1Q9NP79 307 aa16.13■□□□□ 0.17
GTF3C3-206ENST00000448539 BARHL2Q9NY43 387 aa16.13■□□□□ 0.17
GTF3C3-206ENST00000448539 COL20A1Q9P218 1284 aa16.13■□□□□ 0.17
GTF3C3-206ENST00000448539 ST18O60284 1047 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 ADCY7P51828 1080 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 SCRN1Q12765 414 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 CCDC144BQ3MJ40 725 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 ANO1Q5XXA6 986 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 LHX8Q68G74 356 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 FBXO16Q8IX29 292 aaPredicted RBP16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 IL27Q8NEV9 243 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 SHISA4Q96DD7 197 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 TBC1D32Q96NH3 1257 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 KIF2CQ99661 725 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 GLT8D2Q9H1C3 349 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 PXMP2Q9NR77 195 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 OGDHLQ9ULD0 1010 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 LIMCH1Q9UPQ0 1083 aa16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 DDX49Q9Y6V7 483 aaKnown RBP16.12■□□□□ 0.17
GTF3C3-206ENST00000448539 STXBP3O00186 592 aa16.11■□□□□ 0.17
GTF3C3-206ENST00000448539 PIK3CDO00329 1044 aa16.11■□□□□ 0.17
GTF3C3-206ENST00000448539 PPFIA3O75145 1194 aa16.11■□□□□ 0.17
GTF3C3-206ENST00000448539 FARP2O94887 1054 aaPredicted RBP16.11■□□□□ 0.17
GTF3C3-206ENST00000448539 NR3C2P08235 984 aa16.11■□□□□ 0.17
GTF3C3-206ENST00000448539 EDNRBP24530 442 aa16.11■□□□□ 0.17
GTF3C3-206ENST00000448539 STXBP2Q15833 593 aa16.11■□□□□ 0.17
GTF3C3-206ENST00000448539 ME3Q16798 604 aa16.11■□□□□ 0.17
GTF3C3-206ENST00000448539 USP17L6PQ6QN14 398 aa16.11■□□□□ 0.17
GTF3C3-206ENST00000448539 ANKLE1Q8NAG6 615 aa16.11■□□□□ 0.17
GTF3C3-206ENST00000448539 ARRDC4Q8NCT1 418 aa16.11■□□□□ 0.17
GTF3C3-206ENST00000448539 XPNPEP3Q9NQH7 507 aa16.11■□□□□ 0.17
GTF3C3-206ENST00000448539 SMCO2A6NFE2 343 aa16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 SPDYE3A6NKU9 549 aa16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 DEXIO95424 95 aa16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 MYCLP12524 364 aaPredicted RBP16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 TNFAIP2Q03169 654 aa16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 PKN1Q16512 942 aa16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 IQSEC1Q6DN90 963 aa16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 TEX2Q8IWB9 1127 aa16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 CCDC148Q8NFR7 591 aa16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 ZSCAN31Q96LW9 406 aaPredicted RBP16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 PDCD2LQ9BRP1 358 aa16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 KATNBL1Q9H079 304 aa16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 EHMT1Q9H9B1 1298 aa16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 SPC25Q9HBM1 224 aa16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 C6orf50Q9HD87 102 aa16.1■□□□□ 0.17
GTF3C3-206ENST00000448539 KBTBD13C9JR72 458 aa16.09■□□□□ 0.17
GTF3C3-206ENST00000448539 MEIS2O14770 477 aa16.09■□□□□ 0.17
GTF3C3-206ENST00000448539 DUSP11O75319 330 aaKnown RBP16.09■□□□□ 0.17
GTF3C3-206ENST00000448539 CCND2P30279 289 aa16.09■□□□□ 0.17
GTF3C3-206ENST00000448539 ADCYAP1R1P41586 468 aa16.09■□□□□ 0.17
GTF3C3-206ENST00000448539 PGM5Q15124 567 aa16.09■□□□□ 0.17
GTF3C3-206ENST00000448539 UBE2SQ16763 222 aa16.09■□□□□ 0.17
GTF3C3-206ENST00000448539 RNF180Q86T96 592 aa16.09■□□□□ 0.17
GTF3C3-206ENST00000448539 NECAB1Q8N987 351 aa16.09■□□□□ 0.17
GTF3C3-206ENST00000448539 GTF3C6Q969F1 213 aa16.09■□□□□ 0.17
GTF3C3-206ENST00000448539 RIC8AQ9NPQ8 531 aa16.09■□□□□ 0.17
GTF3C3-206ENST00000448539 PDGFCQ9NRA1 345 aa16.09■□□□□ 0.17
GTF3C3-206ENST00000448539 EIF3JO75822 258 aaKnown RBP16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 LARGE1O95461 756 aa16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 PGK1P00558 417 aa16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 GNA11P29992 359 aa16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 TYW1BQ6NUM6 668 aa16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 TAPT1Q6NXT6 567 aa16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 NECAB2Q7Z6G3 386 aa16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 SCFD2Q8WU76 684 aa16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 WASF1Q92558 559 aa16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 LENG1Q96BZ8 264 aaPredicted RBP16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 WDR11Q9BZH6 1224 aa16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 AP5M1Q9H0R1 490 aa16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 SH3GLB2Q9NR46 395 aa16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 SH2B1Q9NRF2 756 aaPredicted RBP16.08■□□□□ 0.16
GTF3C3-206ENST00000448539 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 ESYT2A0FGR8 921 aa16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 FOSP01100 380 aaPredicted RBP16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 XBP1P17861 261 aa16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 NLRP5P59047 1200 aa16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 TTLL4Q14679 1199 aa16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 GJC2Q5T442 439 aaPredicted RBP16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 SEPT14Q6ZU15 432 aa16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 TLK2Q86UE8 772 aa16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 VSIG10LQ86VR7 867 aa16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 BICD2Q8TD16 824 aa16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 PAWRQ96IZ0 340 aaKnown RBP16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 VPS54Q9P1Q0 977 aa16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 ORC3Q9UBD5 711 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms